RNA–Protein interactions for RNA: ENST00000563003.1

AC040174.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC040174.1, Length 2,571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040174.1-201ENST00000563003 PPP6R1Q9UPN7 881 aa17.68■□□□□ 0.42
AC040174.1-201ENST00000563003 GLIPR1L2Q4G1C9 344 aa17.67■□□□□ 0.42
AC040174.1-201ENST00000563003 CFAP70Q5T0N1 1121 aa17.67■□□□□ 0.42
AC040174.1-201ENST00000563003 PER1O15534 1290 aaPredicted RBP17.66■□□□□ 0.42
AC040174.1-201ENST00000563003 SLC52A1Q9NWF4 448 aa17.66■□□□□ 0.42
AC040174.1-201ENST00000563003 INSRP06213 1382 aa17.65■□□□□ 0.42
AC040174.1-201ENST00000563003 L1TD1Q5T7N2 865 aaKnown RBP17.65■□□□□ 0.42
AC040174.1-201ENST00000563003 PREX1Q8TCU6 1659 aa17.64■□□□□ 0.41
AC040174.1-201ENST00000563003 SLC24A1O60721 1099 aa17.63■□□□□ 0.41
AC040174.1-201ENST00000563003 CDCA8Q53HL2 280 aa17.63■□□□□ 0.41
AC040174.1-201ENST00000563003 USP19O94966 1318 aa17.63■□□□□ 0.41
AC040174.1-201ENST00000563003 SETBP1Q9Y6X0 1596 aa17.63■□□□□ 0.41
AC040174.1-201ENST00000563003 CC2D1BQ5T0F9 858 aaKnown RBP17.63■□□□□ 0.41
AC040174.1-201ENST00000563003 PIK3C2GO75747 1445 aa17.62■□□□□ 0.41
AC040174.1-201ENST00000563003 IDI1Q13907 227 aa17.62■□□□□ 0.41
AC040174.1-201ENST00000563003 ARHGEF40Q8TER5 1519 aa17.61■□□□□ 0.41
AC040174.1-201ENST00000563003 C14orf93Q9H972 538 aaKnown RBP17.61■□□□□ 0.41
AC040174.1-201ENST00000563003 DUSP27Q5VZP5 1158 aa17.6■□□□□ 0.41
AC040174.1-201ENST00000563003 VSIG10Q8N0Z9 540 aa17.6■□□□□ 0.41
AC040174.1-201ENST00000563003 ZMYND15Q9H091 742 aa17.6■□□□□ 0.41
AC040174.1-201ENST00000563003 VGFO15240 615 aaPredicted RBP17.59■□□□□ 0.41
AC040174.1-201ENST00000563003 SLKQ9H2G2 1235 aaPredicted RBP17.59■□□□□ 0.41
AC040174.1-201ENST00000563003 NAP1L5Q96NT1 182 aaPredicted RBP17.59■□□□□ 0.41
AC040174.1-201ENST00000563003 NEXMIFQ5QGS0 1516 aa17.59■□□□□ 0.41
AC040174.1-201ENST00000563003 PANK3Q9H999 370 aa17.58■□□□□ 0.4
AC040174.1-201ENST00000563003 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.57■□□□□ 0.4
AC040174.1-201ENST00000563003 ADAMTS8Q9UP79 889 aa17.57■□□□□ 0.4
AC040174.1-201ENST00000563003 CLTCQ00610 1675 aaKnown RBP17.57■□□□□ 0.4
AC040174.1-201ENST00000563003 MYO3AQ8NEV4 1616 aa17.57■□□□□ 0.4
AC040174.1-201ENST00000563003 BECN1Q14457 450 aa17.57■□□□□ 0.4
AC040174.1-201ENST00000563003 PNNQ9H307 717 aaKnown RBP17.57■□□□□ 0.4
AC040174.1-201ENST00000563003 ERVK-7P63135 1459 aa17.57■□□□□ 0.4
AC040174.1-201ENST00000563003 SEC24BO95487 1268 aa17.56■□□□□ 0.4
AC040174.1-201ENST00000563003 ZFYVE9O95405 1425 aa17.56■□□□□ 0.4
AC040174.1-201ENST00000563003 XRCC6P12956 609 aaKnown RBP eCLIP17.56■□□□□ 0.4
AC040174.1-201ENST00000563003 ARXQ96QS3 562 aa17.56■□□□□ 0.4
AC040174.1-201ENST00000563003 TMEM131LA2VDJ0 1609 aa17.56■□□□□ 0.4
AC040174.1-201ENST00000563003 MYO5BQ9ULV0 1848 aa17.56■□□□□ 0.4
AC040174.1-201ENST00000563003 FBXO31Q5XUX0 539 aaPredicted RBP17.55■□□□□ 0.4
AC040174.1-201ENST00000563003 PLEKHH1Q9ULM0 1364 aa17.55■□□□□ 0.4
AC040174.1-201ENST00000563003 ADGRB1O14514 1584 aa17.55■□□□□ 0.4
AC040174.1-201ENST00000563003 HSP90AA2PQ14568 343 aaPredicted RBP17.55■□□□□ 0.4
AC040174.1-201ENST00000563003 SBNO2Q9Y2G9 1366 aa17.54■□□□□ 0.4
AC040174.1-201ENST00000563003 CLCN1P35523 988 aa17.54■□□□□ 0.4
AC040174.1-201ENST00000563003 ANTXR1Q9H6X2 564 aa17.54■□□□□ 0.4
AC040174.1-201ENST00000563003 KDM5AP29375 1690 aaKnown RBP17.54■□□□□ 0.4
AC040174.1-201ENST00000563003 RRP9O43818 475 aaKnown RBP17.52■□□□□ 0.4
AC040174.1-201ENST00000563003 HSP90AA1P07900 732 aaKnown RBP17.52■□□□□ 0.4
AC040174.1-201ENST00000563003 GOLGA6L3A6NEY3 463 aa17.52■□□□□ 0.39
AC040174.1-201ENST00000563003 GOLGA2Q08379 1002 aa17.52■□□□□ 0.39
AC040174.1-201ENST00000563003 MLECQ14165 292 aa17.52■□□□□ 0.39
AC040174.1-201ENST00000563003 CENPJQ9HC77 1338 aaPredicted RBP17.51■□□□□ 0.39
AC040174.1-201ENST00000563003 IGHDP01880 384 aa17.51■□□□□ 0.39
AC040174.1-201ENST00000563003 ZNF521Q96K83 1311 aa17.51■□□□□ 0.39
AC040174.1-201ENST00000563003 FSD2A1L4K1 749 aa17.51■□□□□ 0.39
AC040174.1-201ENST00000563003 PANK2Q9BZ23 570 aa17.51■□□□□ 0.39
AC040174.1-201ENST00000563003 SPATA31D1Q6ZQQ2 1576 aa17.5■□□□□ 0.39
AC040174.1-201ENST00000563003 NUTM2DQ5VT03 806 aaPredicted RBP17.5■□□□□ 0.39
AC040174.1-201ENST00000563003 TRAK1Q9UPV9 953 aa17.5■□□□□ 0.39
AC040174.1-201ENST00000563003 MYOM1P52179 1685 aa17.5■□□□□ 0.39
AC040174.1-201ENST00000563003 TMEM132EQ6IEE7 984 aa17.49■□□□□ 0.39
AC040174.1-201ENST00000563003 KDM4FA0A1W2PPD8 638 aa17.49■□□□□ 0.39
AC040174.1-201ENST00000563003 KNSTRNQ9Y448 316 aa17.48■□□□□ 0.39
AC040174.1-201ENST00000563003 ESF1Q9H501 851 aaKnown RBP17.48■□□□□ 0.39
AC040174.1-201ENST00000563003 SLFN5Q08AF3 891 aa17.47■□□□□ 0.39
AC040174.1-201ENST00000563003 STAG3Q9UJ98 1225 aa17.47■□□□□ 0.39
AC040174.1-201ENST00000563003 QRICH2Q9H0J4 1663 aa17.47■□□□□ 0.39
AC040174.1-201ENST00000563003 GZF1Q9H116 711 aaPredicted RBP17.46■□□□□ 0.39
AC040174.1-201ENST00000563003 WDR43Q15061 677 aaKnown RBP eCLIP17.46■□□□□ 0.39
AC040174.1-201ENST00000563003 NLRP1Q9C000 1473 aa17.46■□□□□ 0.39
AC040174.1-201ENST00000563003 BCAR3O75815 825 aa17.45■□□□□ 0.38
AC040174.1-201ENST00000563003 ZMYM3Q14202 1370 aa17.45■□□□□ 0.38
AC040174.1-201ENST00000563003 TBC1D2Q9BYX2 928 aa17.44■□□□□ 0.38
AC040174.1-201ENST00000563003 MAPK8IP3Q9UPT6 1336 aa17.44■□□□□ 0.38
AC040174.1-201ENST00000563003 ARHGEF28Q8N1W1 1705 aaKnown RBP17.44■□□□□ 0.38
AC040174.1-201ENST00000563003 VIRMAQ69YN4 1812 aaKnown RBP17.44■□□□□ 0.38
AC040174.1-201ENST00000563003 MCM4P33991 863 aa17.43■□□□□ 0.38
AC040174.1-201ENST00000563003 TRMT2AQ8IZ69 625 aaKnown RBP17.43■□□□□ 0.38
AC040174.1-201ENST00000563003 ASXL1Q8IXJ9 1541 aa17.43■□□□□ 0.38
AC040174.1-201ENST00000563003 A2ML1A8K2U0 1454 aa17.42■□□□□ 0.38
AC040174.1-201ENST00000563003 AMER1Q5JTC6 1135 aaPredicted RBP17.42■□□□□ 0.38
AC040174.1-201ENST00000563003 NPC1L1Q9UHC9 1359 aa17.42■□□□□ 0.38
AC040174.1-201ENST00000563003 SPINK5Q9NQ38 1064 aaPredicted RBP17.42■□□□□ 0.38
AC040174.1-201ENST00000563003 PPP2R1AP30153 589 aa17.41■□□□□ 0.38
AC040174.1-201ENST00000563003 TBC1D32Q96NH3 1257 aa17.41■□□□□ 0.38
AC040174.1-201ENST00000563003 SPRYD3Q8NCJ5 442 aa17.39■□□□□ 0.38
AC040174.1-201ENST00000563003 PUS7Q96PZ0 661 aaKnown RBP17.39■□□□□ 0.38
AC040174.1-201ENST00000563003 UPF2Q9HAU5 1272 aaKnown RBP17.39■□□□□ 0.38
AC040174.1-201ENST00000563003 MRE11P49959 708 aa17.39■□□□□ 0.37
AC040174.1-201ENST00000563003 ALKQ9UM73 1620 aa17.38■□□□□ 0.37
AC040174.1-201ENST00000563003 CGNL1Q0VF96 1302 aa17.38■□□□□ 0.37
AC040174.1-201ENST00000563003 TRAK2O60296 914 aa17.38■□□□□ 0.37
AC040174.1-201ENST00000563003 CLUAP1Q96AJ1 413 aa17.38■□□□□ 0.37
AC040174.1-201ENST00000563003 NKTRP30414 1462 aaKnown RBP17.38■□□□□ 0.37
AC040174.1-201ENST00000563003 RIMS2Q9UQ26 1411 aa17.38■□□□□ 0.37
AC040174.1-201ENST00000563003 EVC2Q86UK5 1308 aa17.37■□□□□ 0.37
AC040174.1-201ENST00000563003 ESPNB1AK53 854 aa17.37■□□□□ 0.37
AC040174.1-201ENST00000563003 CCDC146Q8IYE0 955 aa17.36■□□□□ 0.37
AC040174.1-201ENST00000563003 ADAMTSL3P82987 1691 aa17.36■□□□□ 0.37
AC040174.1-201ENST00000563003 MYH16Q9H6N6 1097 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms