RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 CLUAP1Q96AJ1 413 aa10.95□□□□□ -0.66
CHD9-205ENST00000562785 HPS5Q9UPZ3 1129 aa10.95□□□□□ -0.66
CHD9-205ENST00000562785 PPP4CP60510 307 aa10.94□□□□□ -0.66
CHD9-205ENST00000562785 MTMR14Q8NCE2 650 aa10.94□□□□□ -0.66
CHD9-205ENST00000562785 TSR3Q9UJK0 312 aaKnown RBP10.94□□□□□ -0.66
CHD9-205ENST00000562785 AP1G2O75843 785 aa10.93□□□□□ -0.66
CHD9-205ENST00000562785 USP17L8P0C7I0 530 aa10.92□□□□□ -0.66
CHD9-205ENST00000562785 C6orf229H3BNL8 230 aa10.91□□□□□ -0.66
CHD9-205ENST00000562785 APLP1P51693 650 aa10.91□□□□□ -0.66
CHD9-205ENST00000562785 PUS10Q3MIT2 529 aaKnown RBP10.91□□□□□ -0.66
CHD9-205ENST00000562785 POM121Q96HA1 1249 aa10.91□□□□□ -0.66
CHD9-205ENST00000562785 RAD21O60216 631 aa10.9□□□□□ -0.66
CHD9-205ENST00000562785 SLC27A5Q9Y2P5 690 aa10.9□□□□□ -0.66
CHD9-205ENST00000562785 COG6Q9Y2V7 657 aa10.9□□□□□ -0.66
CHD9-205ENST00000562785 CFAP99D6REC4 459 aa10.89□□□□□ -0.67
CHD9-205ENST00000562785 Q3C1V9 767 aa10.89□□□□□ -0.67
CHD9-205ENST00000562785 HELBQ8NG08 1087 aaPredicted RBP10.89□□□□□ -0.67
CHD9-205ENST00000562785 APBB1O00213 710 aa10.88□□□□□ -0.67
CHD9-205ENST00000562785 TRAK2O60296 914 aa10.88□□□□□ -0.67
CHD9-205ENST00000562785 THSD4Q6ZMP0 1018 aa10.88□□□□□ -0.67
CHD9-205ENST00000562785 RETREG3Q86VR2 466 aa10.88□□□□□ -0.67
CHD9-205ENST00000562785 PROSER2Q86WR7 435 aaPredicted RBP10.88□□□□□ -0.67
CHD9-205ENST00000562785 FNBP4Q8N3X1 1017 aaPredicted RBP10.87□□□□□ -0.67
CHD9-205ENST00000562785 SYMPKQ92797 1274 aaKnown RBP10.87□□□□□ -0.67
CHD9-205ENST00000562785 CTDSPL2Q05D32 466 aa10.86□□□□□ -0.67
CHD9-205ENST00000562785 PRR7Q8TB68 274 aa10.86□□□□□ -0.67
CHD9-205ENST00000562785 WBP1LQ9NX94 342 aa10.86□□□□□ -0.67
CHD9-205ENST00000562785 SALL2Q9Y467 1007 aaPredicted RBP10.86□□□□□ -0.67
CHD9-205ENST00000562785 PCDHB3Q9Y5E6 796 aa10.86□□□□□ -0.67
CHD9-205ENST00000562785 POTEGQ6S5H5 508 aa10.85□□□□□ -0.67
CHD9-205ENST00000562785 RNF19BQ6ZMZ0 732 aa10.84□□□□□ -0.67
CHD9-205ENST00000562785 GJD4Q96KN9 370 aaPredicted RBP10.84□□□□□ -0.67
CHD9-205ENST00000562785 POTEMA6NI47 508 aa10.83□□□□□ -0.68
CHD9-205ENST00000562785 NR1I2O75469 434 aa10.83□□□□□ -0.68
CHD9-205ENST00000562785 DESI1Q6ICB0 168 aa10.83□□□□□ -0.68
CHD9-205ENST00000562785 BLOC1S3Q6QNY0 202 aa10.83□□□□□ -0.68
CHD9-205ENST00000562785 CDAN1Q8IWY9 1227 aa10.83□□□□□ -0.68
CHD9-205ENST00000562785 TSC1Q92574 1164 aa10.83□□□□□ -0.68
CHD9-205ENST00000562785 KCTD12Q96CX2 325 aaKnown RBP10.83□□□□□ -0.68
CHD9-205ENST00000562785 C1orf115Q9H7X2 142 aa10.83□□□□□ -0.68
CHD9-205ENST00000562785 HMX1Q9NP08 348 aaPredicted RBP10.83□□□□□ -0.68
CHD9-205ENST00000562785 BRICD5Q6PL45 260 aa10.82□□□□□ -0.68
CHD9-205ENST00000562785 SCUBE3Q8IX30 993 aa10.82□□□□□ -0.68
CHD9-205ENST00000562785 THAP11Q96EK4 314 aa10.82□□□□□ -0.68
CHD9-205ENST00000562785 GDPD2Q9HCC8 539 aa10.82□□□□□ -0.68
CHD9-205ENST00000562785 PRM3Q9NNZ6 103 aa10.82□□□□□ -0.68
CHD9-205ENST00000562785 NYAP1Q6ZVC0 841 aa10.81□□□□□ -0.68
CHD9-205ENST00000562785 TBC1D2BQ9UPU7 963 aa10.81□□□□□ -0.68
CHD9-205ENST00000562785 ARID3CA6NKF2 412 aa10.8□□□□□ -0.68
CHD9-205ENST00000562785 FMNL1O95466 1100 aaPredicted RBP10.8□□□□□ -0.68
CHD9-205ENST00000562785 LRRN4Q8WUT4 740 aa10.8□□□□□ -0.68
CHD9-205ENST00000562785 USB1Q9BQ65 265 aaKnown RBP10.8□□□□□ -0.68
CHD9-205ENST00000562785 TRIM34Q9BYJ4 488 aa10.8□□□□□ -0.68
CHD9-205ENST00000562785 NDUFB9Q9Y6M9 179 aa10.8□□□□□ -0.68
CHD9-205ENST00000562785 ARXQ96QS3 562 aa10.78□□□□□ -0.68
CHD9-205ENST00000562785 PER1O15534 1290 aaPredicted RBP10.77□□□□□ -0.69
CHD9-205ENST00000562785 GPR37L1O60883 481 aa10.76□□□□□ -0.69
CHD9-205ENST00000562785 ABL2P42684 1182 aa10.76□□□□□ -0.69
CHD9-205ENST00000562785 WWC1Q8IX03 1113 aa10.76□□□□□ -0.69
CHD9-205ENST00000562785 LYPD8Q6UX82 237 aa10.75□□□□□ -0.69
CHD9-205ENST00000562785 COPS2P61201 443 aa10.74□□□□□ -0.69
CHD9-205ENST00000562785 MSS51Q4VC12 460 aa10.74□□□□□ -0.69
CHD9-205ENST00000562785 ZNF330Q9Y3S2 320 aaPredicted RBP10.74□□□□□ -0.69
CHD9-205ENST00000562785 JUNDP17535 347 aa10.73□□□□□ -0.69
CHD9-205ENST00000562785 IRF5Q13568 498 aa10.73□□□□□ -0.69
CHD9-205ENST00000562785 EPS8L1Q8TE68 723 aa10.73□□□□□ -0.69
CHD9-205ENST00000562785 ZNF777Q9ULD5 760 aaPredicted RBP10.73□□□□□ -0.69
CHD9-205ENST00000562785 SPSB2Q99619 263 aa10.72□□□□□ -0.69
CHD9-205ENST00000562785 PTPN5P54829 565 aa10.71□□□□□ -0.69
CHD9-205ENST00000562785 NR6A1Q15406 480 aa10.71□□□□□ -0.69
CHD9-205ENST00000562785 PTPRNQ16849 979 aa10.71□□□□□ -0.69
CHD9-205ENST00000562785 MTRQ99707 1265 aa10.71□□□□□ -0.69
CHD9-205ENST00000562785 MYT1LQ9UL68 1186 aa10.71□□□□□ -0.69
CHD9-205ENST00000562785 ZPR1O75312 459 aa10.7□□□□□ -0.7
CHD9-205ENST00000562785 CCDC82Q8N4S0 544 aa10.7□□□□□ -0.7
CHD9-205ENST00000562785 FAM160A2Q8N612 972 aaPredicted RBP10.7□□□□□ -0.7
CHD9-205ENST00000562785 PLSCR2Q9NRY7 297 aa10.7□□□□□ -0.7
CHD9-205ENST00000562785 DXOO77932 396 aaKnown RBP10.69□□□□□ -0.7
CHD9-205ENST00000562785 F12P00748 615 aaPredicted RBP10.69□□□□□ -0.7
CHD9-205ENST00000562785 MMP16P51512 607 aa10.69□□□□□ -0.7
CHD9-205ENST00000562785 TLL1O43897 1013 aa10.68□□□□□ -0.7
CHD9-205ENST00000562785 ADH1BP00325 375 aa10.68□□□□□ -0.7
CHD9-205ENST00000562785 WASHC4Q2M389 1173 aa10.68□□□□□ -0.7
CHD9-205ENST00000562785 TJAP1Q5JTD0 557 aa10.67□□□□□ -0.7
CHD9-205ENST00000562785 HOMEZQ8IX15 550 aa10.67□□□□□ -0.7
CHD9-205ENST00000562785 ARID3AQ99856 593 aa10.67□□□□□ -0.7
CHD9-205ENST00000562785 IL21Q9HBE4 155 aa10.67□□□□□ -0.7
CHD9-205ENST00000562785 POM121CA8CG34 1229 aa10.66□□□□□ -0.7
CHD9-205ENST00000562785 PNMA1Q8ND90 353 aa10.66□□□□□ -0.7
CHD9-205ENST00000562785 PRDM9Q9NQV7 894 aa10.66□□□□□ -0.7
CHD9-205ENST00000562785 CCNYL3P0C7X3 344 aa10.65□□□□□ -0.7
CHD9-205ENST00000562785 MAP10Q9P2G4 905 aa10.64□□□□□ -0.71
CHD9-205ENST00000562785 SERPINA10Q9UK55 444 aa10.64□□□□□ -0.71
CHD9-205ENST00000562785 ZNF516Q92618 1163 aa10.63□□□□□ -0.71
CHD9-205ENST00000562785 CCDC97Q96F63 343 aaPredicted RBP10.63□□□□□ -0.71
CHD9-205ENST00000562785 NUDT12Q9BQG2 462 aa10.63□□□□□ -0.71
CHD9-205ENST00000562785 ZC3H4Q9UPT8 1303 aaKnown RBP10.62□□□□□ -0.71
CHD9-205ENST00000562785 VAC14Q08AM6 782 aa10.62□□□□□ -0.71
CHD9-205ENST00000562785 GLMNQ92990 594 aa10.62□□□□□ -0.71
CHD9-205ENST00000562785 PCDH10Q9P2E7 1040 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms