RNA–Protein interactions for RNA: ENST00000562136.1

HERC2-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 2

Gene HERC2, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-202ENST00000562136 NUTM2BA6NNL0 878 aaPredicted RBP18.75■□□□□ 0.59
HERC2-202ENST00000562136 NUTM2EB1AL46 878 aaPredicted RBP18.75■□□□□ 0.59
HERC2-202ENST00000562136 NUTM2AQ8IVF1 878 aaPredicted RBP18.75■□□□□ 0.59
HERC2-202ENST00000562136 LRPPRCP42704 1394 aaKnown RBP18.75■□□□□ 0.59
HERC2-202ENST00000562136 NRXN1Q9ULB1 1477 aa18.74■□□□□ 0.59
HERC2-202ENST00000562136 RXRBP28702 533 aa18.74■□□□□ 0.59
HERC2-202ENST00000562136 PXDNQ92626 1479 aa18.71■□□□□ 0.59
HERC2-202ENST00000562136 RGL3Q3MIN7 710 aa18.71■□□□□ 0.59
HERC2-202ENST00000562136 UPF1Q92900 1129 aaKnown RBP eCLIP18.71■□□□□ 0.59
HERC2-202ENST00000562136 SIRT1Q96EB6 747 aa18.71■□□□□ 0.59
HERC2-202ENST00000562136 FMN2Q9NZ56 1722 aa18.71■□□□□ 0.59
HERC2-202ENST00000562136 MARF1Q9Y4F3 1742 aaKnown RBP18.69■□□□□ 0.58
HERC2-202ENST00000562136 YTHDC2Q9H6S0 1430 aaKnown RBP18.69■□□□□ 0.58
HERC2-202ENST00000562136 MYOM2P54296 1465 aa18.69■□□□□ 0.58
HERC2-202ENST00000562136 C14orf93Q9H972 538 aaKnown RBP18.68■□□□□ 0.58
HERC2-202ENST00000562136 NPHP3Q7Z494 1330 aa18.68■□□□□ 0.58
HERC2-202ENST00000562136 RBM6P78332 1123 aaKnown RBP18.67■□□□□ 0.58
HERC2-202ENST00000562136 WAPLQ7Z5K2 1190 aa18.67■□□□□ 0.58
HERC2-202ENST00000562136 C8orf37Q96NL8 207 aa18.67■□□□□ 0.58
HERC2-202ENST00000562136 PLEKHH1Q9ULM0 1364 aa18.67■□□□□ 0.58
HERC2-202ENST00000562136 TMEM132EQ6IEE7 984 aa18.66■□□□□ 0.58
HERC2-202ENST00000562136 FNBP4Q8N3X1 1017 aaPredicted RBP18.66■□□□□ 0.58
HERC2-202ENST00000562136 QTRT2Q9H974 415 aaKnown RBP18.66■□□□□ 0.58
HERC2-202ENST00000562136 KIF1AQ12756 1690 aa18.66■□□□□ 0.58
HERC2-202ENST00000562136 RGS12O14924 1447 aa18.66■□□□□ 0.58
HERC2-202ENST00000562136 ESCO1Q5FWF5 840 aa18.64■□□□□ 0.57
HERC2-202ENST00000562136 STK26Q9P289 416 aa18.64■□□□□ 0.57
HERC2-202ENST00000562136 RGPD8O14715 1765 aaPredicted RBP18.63■□□□□ 0.57
HERC2-202ENST00000562136 NGLY1Q96IV0 654 aa18.63■□□□□ 0.57
HERC2-202ENST00000562136 ADAMTS2O95450 1211 aa18.62■□□□□ 0.57
HERC2-202ENST00000562136 RAB3GAP2Q9H2M9 1393 aa18.62■□□□□ 0.57
HERC2-202ENST00000562136 DLC1Q96QB1 1528 aa18.61■□□□□ 0.57
HERC2-202ENST00000562136 ATRNO75882 1429 aa18.61■□□□□ 0.57
HERC2-202ENST00000562136 FOXO3O43524 673 aa18.6■□□□□ 0.57
HERC2-202ENST00000562136 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.6■□□□□ 0.57
HERC2-202ENST00000562136 ADGRB1O14514 1584 aa18.59■□□□□ 0.57
HERC2-202ENST00000562136 BCL9LQ86UU0 1499 aa18.59■□□□□ 0.57
HERC2-202ENST00000562136 DHX57Q6P158 1386 aaKnown RBP18.58■□□□□ 0.57
HERC2-202ENST00000562136 CFAP70Q5T0N1 1121 aa18.58■□□□□ 0.56
HERC2-202ENST00000562136 USP21Q9UK80 565 aa18.58■□□□□ 0.56
HERC2-202ENST00000562136 TRPC5Q9UL62 973 aaPredicted RBP18.58■□□□□ 0.56
HERC2-202ENST00000562136 ADGRB2O60241 1585 aa18.58■□□□□ 0.56
HERC2-202ENST00000562136 EP400Q96L91 3159 aa18.57■□□□□ 0.56
HERC2-202ENST00000562136 SPATA31A3Q5VYP0 1347 aa18.57■□□□□ 0.56
HERC2-202ENST00000562136 HRCP23327 699 aa18.57■□□□□ 0.56
HERC2-202ENST00000562136 USP32Q8NFA0 1604 aa18.56■□□□□ 0.56
HERC2-202ENST00000562136 XPCQ01831 940 aaPredicted RBP18.54■□□□□ 0.56
HERC2-202ENST00000562136 SLIT2O94813 1529 aa18.54■□□□□ 0.56
HERC2-202ENST00000562136 NUTM2FA1L443 756 aa18.53■□□□□ 0.56
HERC2-202ENST00000562136 STAC3Q96MF2 364 aa18.53■□□□□ 0.56
HERC2-202ENST00000562136 ANKARQ7Z5J8 1434 aa18.52■□□□□ 0.56
HERC2-202ENST00000562136 ABCA3Q99758 1704 aa18.52■□□□□ 0.55
HERC2-202ENST00000562136 KRT28Q7Z3Y7 464 aa18.51■□□□□ 0.55
HERC2-202ENST00000562136 PRAM1Q96QH2 718 aa18.51■□□□□ 0.55
HERC2-202ENST00000562136 PHF8Q9UPP1 1060 aa18.51■□□□□ 0.55
HERC2-202ENST00000562136 SBNO1A3KN83 1393 aa18.51■□□□□ 0.55
HERC2-202ENST00000562136 TNS3Q68CZ2 1445 aa18.5■□□□□ 0.55
HERC2-202ENST00000562136 ATAD2Q6PL18 1390 aa18.5■□□□□ 0.55
HERC2-202ENST00000562136 TRPM3Q9HCF6 1732 aaPredicted RBP18.49■□□□□ 0.55
HERC2-202ENST00000562136 NWD2Q9ULI1 1742 aa18.49■□□□□ 0.55
HERC2-202ENST00000562136 GLI3P10071 1580 aa18.48■□□□□ 0.55
HERC2-202ENST00000562136 PSME1Q06323 249 aa18.47■□□□□ 0.55
HERC2-202ENST00000562136 GJD4Q96KN9 370 aaPredicted RBP18.47■□□□□ 0.55
HERC2-202ENST00000562136 UNC5CLQ8IV45 518 aa18.46■□□□□ 0.55
HERC2-202ENST00000562136 ALS2Q96Q42 1657 aa18.46■□□□□ 0.55
HERC2-202ENST00000562136 PLCH1Q4KWH8 1693 aa18.45■□□□□ 0.54
HERC2-202ENST00000562136 ARHGEF28Q8N1W1 1705 aaKnown RBP18.45■□□□□ 0.54
HERC2-202ENST00000562136 RALGAPBQ86X10 1494 aa18.45■□□□□ 0.54
HERC2-202ENST00000562136 TULP4Q9NRJ4 1543 aa18.44■□□□□ 0.54
HERC2-202ENST00000562136 ARHGEF10O15013 1369 aa18.44■□□□□ 0.54
HERC2-202ENST00000562136 POGKQ9P215 609 aa18.44■□□□□ 0.54
HERC2-202ENST00000562136 BRWD3Q6RI45 1802 aa18.44■□□□□ 0.54
HERC2-202ENST00000562136 SRCAPQ6ZRS2 3230 aa18.44■□□□□ 0.54
HERC2-202ENST00000562136 SAFB2Q14151 953 aaKnown RBP eCLIP18.43■□□□□ 0.54
HERC2-202ENST00000562136 KIAA1210Q9ULL0 1709 aa18.43■□□□□ 0.54
HERC2-202ENST00000562136 EIF3AQ14152 1382 aaKnown RBP18.42■□□□□ 0.54
HERC2-202ENST00000562136 DCAF11Q8TEB1 546 aa18.42■□□□□ 0.54
HERC2-202ENST00000562136 CRYBG1Q9Y4K1 1723 aa18.42■□□□□ 0.54
HERC2-202ENST00000562136 PRR36Q9H6K5 1346 aa18.42■□□□□ 0.54
HERC2-202ENST00000562136 ONECUT3O60422 494 aaPredicted RBP18.41■□□□□ 0.54
HERC2-202ENST00000562136 CCDC125Q86Z20 511 aa18.41■□□□□ 0.54
HERC2-202ENST00000562136 TRAK1Q9UPV9 953 aa18.41■□□□□ 0.54
HERC2-202ENST00000562136 NRAPQ86VF7 1730 aa18.4■□□□□ 0.54
HERC2-202ENST00000562136 WASLO00401 505 aaPredicted RBP18.39■□□□□ 0.53
HERC2-202ENST00000562136 VPS72Q15906 364 aa18.39■□□□□ 0.53
HERC2-202ENST00000562136 ITSN1Q15811 1721 aa18.39■□□□□ 0.53
HERC2-202ENST00000562136 PMFBP1Q8TBY8 1022 aa18.38■□□□□ 0.53
HERC2-202ENST00000562136 CABLES1Q8TDN4 633 aa18.38■□□□□ 0.53
HERC2-202ENST00000562136 KDM2AQ9Y2K7 1162 aa18.38■□□□□ 0.53
HERC2-202ENST00000562136 ATP7BP35670 1465 aa18.36■□□□□ 0.53
HERC2-202ENST00000562136 COL14A1Q05707 1796 aaKnown RBP18.36■□□□□ 0.53
HERC2-202ENST00000562136 MINK1Q8N4C8 1332 aaPredicted RBP18.36■□□□□ 0.53
HERC2-202ENST00000562136 HIRIP3Q9BW71 556 aaPredicted RBP18.36■□□□□ 0.53
HERC2-202ENST00000562136 FAM83GA6ND36 823 aa18.35■□□□□ 0.53
HERC2-202ENST00000562136 TOPAZ1Q8N9V7 1692 aa18.34■□□□□ 0.53
HERC2-202ENST00000562136 GPRASP1Q5JY77 1395 aa18.34■□□□□ 0.53
HERC2-202ENST00000562136 BLMP54132 1417 aaPredicted RBP18.32■□□□□ 0.52
HERC2-202ENST00000562136 HAP1P54257 671 aaPredicted RBP18.31■□□□□ 0.52
HERC2-202ENST00000562136 SEPT12Q8IYM1 358 aa18.31■□□□□ 0.52
HERC2-202ENST00000562136 LMOD2Q6P5Q4 547 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms