RNA–Protein interactions for RNA: ENST00000561954.1

IFT140-205, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-205ENST00000561954 TRAK1Q9UPV9 953 aa19.94■□□□□ 0.78
IFT140-205ENST00000561954 ADGRB2O60241 1585 aa19.94■□□□□ 0.78
IFT140-205ENST00000561954 NBPF1Q3BBV0 1214 aa19.93■□□□□ 0.78
IFT140-205ENST00000561954 NBPF8Q3BBV2 869 aa19.93■□□□□ 0.78
IFT140-205ENST00000561954 PRAM1Q96QH2 718 aa19.93■□□□□ 0.78
IFT140-205ENST00000561954 POGKQ9P215 609 aa19.93■□□□□ 0.78
IFT140-205ENST00000561954 PLEKHH1Q9ULM0 1364 aa19.92■□□□□ 0.78
IFT140-205ENST00000561954 WAPLQ7Z5K2 1190 aa19.9■□□□□ 0.78
IFT140-205ENST00000561954 CARD11Q9BXL7 1154 aa19.89■□□□□ 0.77
IFT140-205ENST00000561954 MST1RQ04912 1400 aa19.87■□□□□ 0.77
IFT140-205ENST00000561954 SCAF1Q9H7N4 1312 aaKnown RBP19.86■□□□□ 0.77
IFT140-205ENST00000561954 CENPJQ9HC77 1338 aaPredicted RBP19.86■□□□□ 0.77
IFT140-205ENST00000561954 QRICH2Q9H0J4 1663 aa19.86■□□□□ 0.77
IFT140-205ENST00000561954 FMN2Q9NZ56 1722 aa19.85■□□□□ 0.77
IFT140-205ENST00000561954 PIP4K2BP78356 416 aa19.84■□□□□ 0.77
IFT140-205ENST00000561954 SAFB2Q14151 953 aaKnown RBP eCLIP19.84■□□□□ 0.77
IFT140-205ENST00000561954 SLAIN2Q9P270 581 aa19.84■□□□□ 0.77
IFT140-205ENST00000561954 ROBO1Q9Y6N7 1651 aa19.84■□□□□ 0.77
IFT140-205ENST00000561954 C1orf167Q5SNV9 1468 aa19.83■□□□□ 0.76
IFT140-205ENST00000561954 ANKARQ7Z5J8 1434 aa19.82■□□□□ 0.76
IFT140-205ENST00000561954 SBNO2Q9Y2G9 1366 aa19.82■□□□□ 0.76
IFT140-205ENST00000561954 TULP4Q9NRJ4 1543 aa19.81■□□□□ 0.76
IFT140-205ENST00000561954 MINK1Q8N4C8 1332 aaPredicted RBP19.8■□□□□ 0.76
IFT140-205ENST00000561954 USP47Q96K76 1375 aa19.79■□□□□ 0.76
IFT140-205ENST00000561954 KIF1AQ12756 1690 aa19.78■□□□□ 0.76
IFT140-205ENST00000561954 HIRIP3Q9BW71 556 aaPredicted RBP19.77■□□□□ 0.76
IFT140-205ENST00000561954 AHDC1Q5TGY3 1603 aaPredicted RBP19.76■□□□□ 0.75
IFT140-205ENST00000561954 WASLO00401 505 aaPredicted RBP19.76■□□□□ 0.75
IFT140-205ENST00000561954 SLC24A1O60721 1099 aa19.75■□□□□ 0.75
IFT140-205ENST00000561954 BRINP3Q76B58 766 aa19.75■□□□□ 0.75
IFT140-205ENST00000561954 ITSN1Q15811 1721 aa19.75■□□□□ 0.75
IFT140-205ENST00000561954 ATP7BP35670 1465 aa19.74■□□□□ 0.75
IFT140-205ENST00000561954 ILDR1Q86SU0 546 aaPredicted RBP19.74■□□□□ 0.75
IFT140-205ENST00000561954 EVC2Q86UK5 1308 aa19.74■□□□□ 0.75
IFT140-205ENST00000561954 NHSL1Q5SYE7 1610 aa19.73■□□□□ 0.75
IFT140-205ENST00000561954 USP32Q8NFA0 1604 aa19.73■□□□□ 0.75
IFT140-205ENST00000561954 TOPAZ1Q8N9V7 1692 aa19.71■□□□□ 0.75
IFT140-205ENST00000561954 PHLPP1O60346 1717 aa19.71■□□□□ 0.75
IFT140-205ENST00000561954 ESCO1Q5FWF5 840 aa19.7■□□□□ 0.74
IFT140-205ENST00000561954 NUTM2FA1L443 756 aa19.69■□□□□ 0.74
IFT140-205ENST00000561954 SRPK2P78362 688 aaKnown RBP19.69■□□□□ 0.74
IFT140-205ENST00000561954 CDK19Q9BWU1 502 aa19.69■□□□□ 0.74
IFT140-205ENST00000561954 NPHP3Q7Z494 1330 aa19.69■□□□□ 0.74
IFT140-205ENST00000561954 COL16A1Q07092 1604 aaPredicted RBP19.69■□□□□ 0.74
IFT140-205ENST00000561954 ATAD2Q6PL18 1390 aa19.68■□□□□ 0.74
IFT140-205ENST00000561954 ST20-MTHFSA0A0A6YYL1 179 aa19.67■□□□□ 0.74
IFT140-205ENST00000561954 HSPA1LP34931 641 aa19.67■□□□□ 0.74
IFT140-205ENST00000561954 ORAI2Q96SN7 254 aa19.67■□□□□ 0.74
IFT140-205ENST00000561954 EIF4G2P78344 907 aaKnown RBP eCLIP19.66■□□□□ 0.74
IFT140-205ENST00000561954 PRR36Q9H6K5 1346 aa19.66■□□□□ 0.74
IFT140-205ENST00000561954 NUDT16Q96DE0 195 aaKnown RBP19.65■□□□□ 0.74
IFT140-205ENST00000561954 PHF8Q9UPP1 1060 aa19.65■□□□□ 0.74
IFT140-205ENST00000561954 PXDNQ92626 1479 aa19.63■□□□□ 0.73
IFT140-205ENST00000561954 PPIP5K1Q6PFW1 1433 aa19.63■□□□□ 0.73
IFT140-205ENST00000561954 TESK2Q96S53 571 aa19.63■□□□□ 0.73
IFT140-205ENST00000561954 CCDC61Q9Y6R9 512 aa19.63■□□□□ 0.73
IFT140-205ENST00000561954 RGPD8O14715 1765 aaPredicted RBP19.62■□□□□ 0.73
IFT140-205ENST00000561954 TMF1P82094 1093 aa19.62■□□□□ 0.73
IFT140-205ENST00000561954 CABP2Q9NPB3 220 aa19.62■□□□□ 0.73
IFT140-205ENST00000561954 CDCA8Q53HL2 280 aa19.61■□□□□ 0.73
IFT140-205ENST00000561954 PUS7Q96PZ0 661 aaKnown RBP19.61■□□□□ 0.73
IFT140-205ENST00000561954 JCADQ9P266 1359 aa19.6■□□□□ 0.73
IFT140-205ENST00000561954 NINLQ9Y2I6 1382 aa19.6■□□□□ 0.73
IFT140-205ENST00000561954 SOS2Q07890 1332 aaPredicted RBP19.6■□□□□ 0.73
IFT140-205ENST00000561954 ZEB1P37275 1124 aaPredicted RBP19.6■□□□□ 0.73
IFT140-205ENST00000561954 POLR3AO14802 1390 aaPredicted RBP19.59■□□□□ 0.73
IFT140-205ENST00000561954 SHPRHQ149N8 1683 aa19.59■□□□□ 0.73
IFT140-205ENST00000561954 FOXO3O43524 673 aa19.58■□□□□ 0.72
IFT140-205ENST00000561954 NGDNQ8NEJ9 315 aaKnown RBP19.58■□□□□ 0.72
IFT140-205ENST00000561954 DISP3Q9P2K9 1392 aa19.57■□□□□ 0.72
IFT140-205ENST00000561954 PLEKHG3A1L390 1219 aa19.57■□□□□ 0.72
IFT140-205ENST00000561954 HSPA5P11021 654 aaKnown RBP19.57■□□□□ 0.72
IFT140-205ENST00000561954 PSME1Q06323 249 aa19.57■□□□□ 0.72
IFT140-205ENST00000561954 PMFBP1Q8TBY8 1022 aa19.57■□□□□ 0.72
IFT140-205ENST00000561954 LRRC59Q96AG4 307 aaKnown RBP19.57■□□□□ 0.72
IFT140-205ENST00000561954 TNS3Q68CZ2 1445 aa19.56■□□□□ 0.72
IFT140-205ENST00000561954 SBNO1A3KN83 1393 aa19.56■□□□□ 0.72
IFT140-205ENST00000561954 DDX17Q92841 729 aaKnown RBP19.55■□□□□ 0.72
IFT140-205ENST00000561954 BRD4O60885 1362 aaPredicted RBP19.55■□□□□ 0.72
IFT140-205ENST00000561954 ARHGEF10O15013 1369 aa19.54■□□□□ 0.72
IFT140-205ENST00000561954 TRPM3Q9HCF6 1732 aaPredicted RBP19.54■□□□□ 0.72
IFT140-205ENST00000561954 ACEP12821 1306 aa19.53■□□□□ 0.72
IFT140-205ENST00000561954 KRT28Q7Z3Y7 464 aa19.53■□□□□ 0.72
IFT140-205ENST00000561954 COL22A1Q8NFW1 1626 aaPredicted RBP19.53■□□□□ 0.72
IFT140-205ENST00000561954 SPATA31A6Q5VVP1 1343 aa19.52■□□□□ 0.72
IFT140-205ENST00000561954 CABP1Q9NZU7 370 aa19.52■□□□□ 0.72
IFT140-205ENST00000561954 PNPLA6Q8IY17 1366 aa19.52■□□□□ 0.72
IFT140-205ENST00000561954 XPCQ01831 940 aaPredicted RBP19.51■□□□□ 0.71
IFT140-205ENST00000561954 USP6P35125 1406 aa19.51■□□□□ 0.71
IFT140-205ENST00000561954 SPATA31A3Q5VYP0 1347 aa19.5■□□□□ 0.71
IFT140-205ENST00000561954 TMC1Q8TDI8 760 aa19.49■□□□□ 0.71
IFT140-205ENST00000561954 AKAP12Q02952 1782 aa19.49■□□□□ 0.71
IFT140-205ENST00000561954 CPSF1Q10570 1443 aaKnown RBP19.49■□□□□ 0.71
IFT140-205ENST00000561954 ALS2Q96Q42 1657 aa19.49■□□□□ 0.71
IFT140-205ENST00000561954 MED1Q15648 1581 aaPredicted RBP19.49■□□□□ 0.71
IFT140-205ENST00000561954 NRKQ7Z2Y5 1582 aa19.49■□□□□ 0.71
IFT140-205ENST00000561954 MON2Q7Z3U7 1717 aa19.48■□□□□ 0.71
IFT140-205ENST00000561954 HDGFL2Q7Z4V5 671 aaPredicted RBP19.48■□□□□ 0.71
IFT140-205ENST00000561954 ZNF692Q9BU19 519 aaPredicted RBP19.48■□□□□ 0.71
IFT140-205ENST00000561954 TERF2IPQ9NYB0 399 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms