RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 ACIN1Q9UKV3 1341 aaKnown RBP21.8■■□□□ 1.08
SPG7-205ENST00000561945 PIK3C2GO75747 1445 aa21.8■■□□□ 1.08
SPG7-205ENST00000561945 ORAI2Q96SN7 254 aa21.8■■□□□ 1.08
SPG7-205ENST00000561945 LRPPRCP42704 1394 aaKnown RBP21.78■■□□□ 1.08
SPG7-205ENST00000561945 ABCC11Q96J66 1382 aa21.78■■□□□ 1.08
SPG7-205ENST00000561945 UPF1Q92900 1129 aaKnown RBP eCLIP21.78■■□□□ 1.083e-6■■■■□ 23.1
SPG7-205ENST00000561945 PXDNQ92626 1479 aa21.77■■□□□ 1.07
SPG7-205ENST00000561945 NRXN1Q9ULB1 1477 aa21.76■■□□□ 1.07
SPG7-205ENST00000561945 FMN2Q9NZ56 1722 aa21.74■■□□□ 1.07
SPG7-205ENST00000561945 RGS12O14924 1447 aa21.73■■□□□ 1.07
SPG7-205ENST00000561945 MYOM2P54296 1465 aa21.73■■□□□ 1.07
SPG7-205ENST00000561945 MARF1Q9Y4F3 1742 aaKnown RBP21.73■■□□□ 1.07
SPG7-205ENST00000561945 C8orf37Q96NL8 207 aa21.73■■□□□ 1.07
SPG7-205ENST00000561945 RBM6P78332 1123 aaKnown RBP21.72■■□□□ 1.07
SPG7-205ENST00000561945 SIRT1Q96EB6 747 aa21.72■■□□□ 1.07
SPG7-205ENST00000561945 RGL3Q3MIN7 710 aa21.71■■□□□ 1.07
SPG7-205ENST00000561945 QTRT2Q9H974 415 aaKnown RBP21.71■■□□□ 1.07
SPG7-205ENST00000561945 NPHP3Q7Z494 1330 aa21.71■■□□□ 1.07
SPG7-205ENST00000561945 YTHDC2Q9H6S0 1430 aaKnown RBP21.71■■□□□ 1.07
SPG7-205ENST00000561945 KIF1AQ12756 1690 aa21.7■■□□□ 1.06
SPG7-205ENST00000561945 FNBP4Q8N3X1 1017 aaPredicted RBP21.7■■□□□ 1.06
SPG7-205ENST00000561945 SRCAPQ6ZRS2 3230 aa21.68■■□□□ 1.06
SPG7-205ENST00000561945 WAPLQ7Z5K2 1190 aa21.68■■□□□ 1.06
SPG7-205ENST00000561945 PLEKHH1Q9ULM0 1364 aa21.68■■□□□ 1.06
SPG7-205ENST00000561945 ESCO1Q5FWF5 840 aa21.67■■□□□ 1.06
SPG7-205ENST00000561945 NGLY1Q96IV0 654 aa21.67■■□□□ 1.06
SPG7-205ENST00000561945 C14orf93Q9H972 538 aaKnown RBP21.67■■□□□ 1.06
SPG7-205ENST00000561945 ADAMTS2O95450 1211 aa21.66■■□□□ 1.06
SPG7-205ENST00000561945 TMEM132EQ6IEE7 984 aa21.66■■□□□ 1.06
SPG7-205ENST00000561945 ATRNO75882 1429 aa21.64■■□□□ 1.06
SPG7-205ENST00000561945 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.64■■□□□ 1.06
SPG7-205ENST00000561945 STK26Q9P289 416 aa21.64■■□□□ 1.05
SPG7-205ENST00000561945 USP21Q9UK80 565 aa21.63■■□□□ 1.05
SPG7-205ENST00000561945 BCL9LQ86UU0 1499 aa21.63■■□□□ 1.05
SPG7-205ENST00000561945 DLC1Q96QB1 1528 aa21.62■■□□□ 1.05
SPG7-205ENST00000561945 FOXO3O43524 673 aa21.62■■□□□ 1.05
SPG7-205ENST00000561945 TRPC5Q9UL62 973 aaPredicted RBP21.62■■□□□ 1.05
SPG7-205ENST00000561945 RGPD8O14715 1765 aaPredicted RBP21.61■■□□□ 1.05
SPG7-205ENST00000561945 ADGRB1O14514 1584 aa21.59■■□□□ 1.05
SPG7-205ENST00000561945 ADGRB2O60241 1585 aa21.59■■□□□ 1.05
SPG7-205ENST00000561945 DHX57Q6P158 1386 aaKnown RBP21.59■■□□□ 1.05
SPG7-205ENST00000561945 RAB3GAP2Q9H2M9 1393 aa21.59■■□□□ 1.05
SPG7-205ENST00000561945 EP400Q96L91 3159 aa21.58■■□□□ 1.05
SPG7-205ENST00000561945 SPATA31A3Q5VYP0 1347 aa21.58■■□□□ 1.05
SPG7-205ENST00000561945 CFAP70Q5T0N1 1121 aa21.57■■□□□ 1.04
SPG7-205ENST00000561945 SLIT2O94813 1529 aa21.56■■□□□ 1.04
SPG7-205ENST00000561945 USP32Q8NFA0 1604 aa21.56■■□□□ 1.04
SPG7-205ENST00000561945 XPCQ01831 940 aaPredicted RBP21.55■■□□□ 1.04
SPG7-205ENST00000561945 ATAD2Q6PL18 1390 aa21.55■■□□□ 1.04
SPG7-205ENST00000561945 NUTM2FA1L443 756 aa21.54■■□□□ 1.04
SPG7-205ENST00000561945 ANKARQ7Z5J8 1434 aa21.54■■□□□ 1.04
SPG7-205ENST00000561945 ABCA3Q99758 1704 aa21.53■■□□□ 1.04
SPG7-205ENST00000561945 TNS3Q68CZ2 1445 aa21.52■■□□□ 1.04
SPG7-205ENST00000561945 SBNO1A3KN83 1393 aa21.51■■□□□ 1.03
SPG7-205ENST00000561945 KRT28Q7Z3Y7 464 aa21.51■■□□□ 1.03
SPG7-205ENST00000561945 NWD2Q9ULI1 1742 aa21.5■■□□□ 1.03
SPG7-205ENST00000561945 GLI3P10071 1580 aa21.5■■□□□ 1.03
SPG7-205ENST00000561945 HRCP23327 699 aa21.5■■□□□ 1.03
SPG7-205ENST00000561945 PRAM1Q96QH2 718 aa21.5■■□□□ 1.03
SPG7-205ENST00000561945 PHF8Q9UPP1 1060 aa21.5■■□□□ 1.03
SPG7-205ENST00000561945 GJD4Q96KN9 370 aaPredicted RBP21.49■■□□□ 1.03
SPG7-205ENST00000561945 STAC3Q96MF2 364 aa21.49■■□□□ 1.03
SPG7-205ENST00000561945 TRPM3Q9HCF6 1732 aaPredicted RBP21.49■■□□□ 1.03
SPG7-205ENST00000561945 PSME1Q06323 249 aa21.47■■□□□ 1.03
SPG7-205ENST00000561945 UNC5CLQ8IV45 518 aa21.47■■□□□ 1.03
SPG7-205ENST00000561945 PLCH1Q4KWH8 1693 aa21.47■■□□□ 1.03
SPG7-205ENST00000561945 RALGAPBQ86X10 1494 aa21.45■■□□□ 1.03
SPG7-205ENST00000561945 ALS2Q96Q42 1657 aa21.45■■□□□ 1.02
SPG7-205ENST00000561945 ARHGEF10O15013 1369 aa21.45■■□□□ 1.02
SPG7-205ENST00000561945 TULP4Q9NRJ4 1543 aa21.44■■□□□ 1.02
SPG7-205ENST00000561945 CCDC125Q86Z20 511 aa21.43■■□□□ 1.02
SPG7-205ENST00000561945 EIF3AQ14152 1382 aaKnown RBP21.42■■□□□ 1.02
SPG7-205ENST00000561945 BRWD3Q6RI45 1802 aa21.42■■□□□ 1.02
SPG7-205ENST00000561945 ARHGEF28Q8N1W1 1705 aaKnown RBP21.42■■□□□ 1.02
SPG7-205ENST00000561945 CRYBG1Q9Y4K1 1723 aa21.41■■□□□ 1.02
SPG7-205ENST00000561945 POGKQ9P215 609 aa21.41■■□□□ 1.02
SPG7-205ENST00000561945 SAFB2Q14151 953 aaKnown RBP eCLIP21.4■■□□□ 1.02
SPG7-205ENST00000561945 NRAPQ86VF7 1730 aa21.4■■□□□ 1.02
SPG7-205ENST00000561945 ONECUT3O60422 494 aaPredicted RBP21.39■■□□□ 1.01
SPG7-205ENST00000561945 VPS72Q15906 364 aa21.39■■□□□ 1.01
SPG7-205ENST00000561945 DCAF11Q8TEB1 546 aa21.39■■□□□ 1.01
SPG7-205ENST00000561945 KIAA1210Q9ULL0 1709 aa21.38■■□□□ 1.01
SPG7-205ENST00000561945 PRR36Q9H6K5 1346 aa21.38■■□□□ 1.01
SPG7-205ENST00000561945 TRAK1Q9UPV9 953 aa21.38■■□□□ 1.01
SPG7-205ENST00000561945 ITSN1Q15811 1721 aa21.38■■□□□ 1.01
SPG7-205ENST00000561945 CABLES1Q8TDN4 633 aa21.37■■□□□ 1.01
SPG7-205ENST00000561945 WASLO00401 505 aaPredicted RBP21.36■■□□□ 1.01
SPG7-205ENST00000561945 COL14A1Q05707 1796 aaKnown RBP21.36■■□□□ 1.01
SPG7-205ENST00000561945 PMFBP1Q8TBY8 1022 aa21.35■■□□□ 1.01
SPG7-205ENST00000561945 BLMP54132 1417 aaPredicted RBP21.34■■□□□ 1.01
SPG7-205ENST00000561945 ATP7BP35670 1465 aa21.33■■□□□ 1.01
SPG7-205ENST00000561945 MINK1Q8N4C8 1332 aaPredicted RBP21.33■■□□□ 1.01
SPG7-205ENST00000561945 KDM2AQ9Y2K7 1162 aa21.33■■□□□ 1.01
SPG7-205ENST00000561945 GPRASP1Q5JY77 1395 aa21.33■■□□□ 1
SPG7-205ENST00000561945 TOPAZ1Q8N9V7 1692 aa21.32■■□□□ 1
SPG7-205ENST00000561945 FAM83GA6ND36 823 aa21.32■■□□□ 1
SPG7-205ENST00000561945 HAP1P54257 671 aaPredicted RBP21.32■■□□□ 1
SPG7-205ENST00000561945 HIRIP3Q9BW71 556 aaPredicted RBP21.32■■□□□ 1
SPG7-205ENST00000561945 SEPT12Q8IYM1 358 aa21.29■■□□□ 1
SPG7-205ENST00000561945 LMOD2Q6P5Q4 547 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms