RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 NGEFQ8N5V2 710 aa14.23□□□□□ -0.13
NEIL1-202ENST00000561643 MYO3AQ8NEV4 1616 aa14.23□□□□□ -0.13
NEIL1-202ENST00000561643 SETBP1Q9Y6X0 1596 aa14.23□□□□□ -0.13
NEIL1-202ENST00000561643 FAM69CQ0P6D2 419 aa14.23□□□□□ -0.13
NEIL1-202ENST00000561643 USP35Q9P2H5 1018 aa14.23□□□□□ -0.13
NEIL1-202ENST00000561643 POLR3AO14802 1390 aaPredicted RBP14.22□□□□□ -0.13
NEIL1-202ENST00000561643 BCAR3O75815 825 aa14.22□□□□□ -0.13
NEIL1-202ENST00000561643 ZMYND15Q9H091 742 aa14.22□□□□□ -0.13
NEIL1-202ENST00000561643 DMRT2Q9Y5R5 561 aa14.22□□□□□ -0.13
NEIL1-202ENST00000561643 MLH3Q9UHC1 1453 aa14.21□□□□□ -0.13
NEIL1-202ENST00000561643 RPGRIP1LQ68CZ1 1315 aa14.21□□□□□ -0.13
NEIL1-202ENST00000561643 NUTM2DQ5VT03 806 aaPredicted RBP14.21□□□□□ -0.14
NEIL1-202ENST00000561643 NEUROD2Q15784 382 aa14.2□□□□□ -0.14
NEIL1-202ENST00000561643 FRMPD1Q5SYB0 1578 aa14.2□□□□□ -0.14
NEIL1-202ENST00000561643 CFAP74Q9C0B2 1584 aa14.19□□□□□ -0.14
NEIL1-202ENST00000561643 WWC1Q8IX03 1113 aa14.19□□□□□ -0.14
NEIL1-202ENST00000561643 HECW2Q9P2P5 1572 aa14.19□□□□□ -0.14
NEIL1-202ENST00000561643 CANXP27824 592 aaKnown RBP14.19□□□□□ -0.14
NEIL1-202ENST00000561643 DDRGK1Q96HY6 314 aa14.18□□□□□ -0.14
NEIL1-202ENST00000561643 PPLO60437 1756 aa14.18□□□□□ -0.14
NEIL1-202ENST00000561643 CGNL1Q0VF96 1302 aa14.18□□□□□ -0.14
NEIL1-202ENST00000561643 ADGRB1O14514 1584 aa14.18□□□□□ -0.14
NEIL1-202ENST00000561643 RGS3P49796 1198 aa14.18□□□□□ -0.14
NEIL1-202ENST00000561643 QRICH2Q9H0J4 1663 aa14.18□□□□□ -0.14
NEIL1-202ENST00000561643 RAPGEF3O95398 923 aa14.17□□□□□ -0.14
NEIL1-202ENST00000561643 RRP7AQ9Y3A4 280 aaKnown RBP14.17□□□□□ -0.14
NEIL1-202ENST00000561643 ABCC3O15438 1527 aa14.17□□□□□ -0.14
NEIL1-202ENST00000561643 PPM1GO15355 546 aaPredicted RBP14.17□□□□□ -0.14
NEIL1-202ENST00000561643 GSE1Q14687 1217 aa14.17□□□□□ -0.14
NEIL1-202ENST00000561643 RUNDC1Q96C34 613 aa14.17□□□□□ -0.14
NEIL1-202ENST00000561643 VGFO15240 615 aaPredicted RBP14.16□□□□□ -0.14
NEIL1-202ENST00000561643 FAM161AQ3B820 660 aa14.16□□□□□ -0.14
NEIL1-202ENST00000561643 CFAP53Q96M91 514 aa14.16□□□□□ -0.14
NEIL1-202ENST00000561643 EVC2Q86UK5 1308 aa14.16□□□□□ -0.14
NEIL1-202ENST00000561643 MTHFSP49914 203 aa14.16□□□□□ -0.14
NEIL1-202ENST00000561643 TCP11L2Q8N4U5 519 aa14.15□□□□□ -0.14
NEIL1-202ENST00000561643 SAFB2Q14151 953 aaKnown RBP eCLIP14.14□□□□□ -0.15
NEIL1-202ENST00000561643 SENP3Q9H4L4 574 aaPredicted RBP14.14□□□□□ -0.15
NEIL1-202ENST00000561643 RIMBP3CA6NJZ7 1639 aa14.14□□□□□ -0.15
NEIL1-202ENST00000561643 RIMBP3BA6NNM3 1639 aa14.14□□□□□ -0.15
NEIL1-202ENST00000561643 RIMBP3Q9UFD9 1639 aa14.14□□□□□ -0.15
NEIL1-202ENST00000561643 ZC3H13Q5T200 1668 aaKnown RBP14.14□□□□□ -0.15
NEIL1-202ENST00000561643 PDE3AQ14432 1141 aa14.14□□□□□ -0.15
NEIL1-202ENST00000561643 FRAT1Q92837 279 aaPredicted RBP14.14□□□□□ -0.15
NEIL1-202ENST00000561643 PANK1Q8TE04 598 aa14.13□□□□□ -0.15
NEIL1-202ENST00000561643 CABP2Q9NPB3 220 aa14.13□□□□□ -0.15
NEIL1-202ENST00000561643 C8orf34Q49A92 452 aa14.12□□□□□ -0.15
NEIL1-202ENST00000561643 DAXXQ9UER7 740 aaPredicted RBP14.12□□□□□ -0.15
NEIL1-202ENST00000561643 COG6Q9Y2V7 657 aa14.12□□□□□ -0.15
NEIL1-202ENST00000561643 GLI2P10070 1586 aa14.12□□□□□ -0.15
NEIL1-202ENST00000561643 CAMSAP1Q5T5Y3 1602 aa14.12□□□□□ -0.15
NEIL1-202ENST00000561643 PLPPR3Q6T4P5 718 aa14.12□□□□□ -0.15
NEIL1-202ENST00000561643 NINLQ9Y2I6 1382 aa14.12□□□□□ -0.15
NEIL1-202ENST00000561643 SHPRHQ149N8 1683 aa14.11□□□□□ -0.15
NEIL1-202ENST00000561643 ANKRD36BQ8N2N9 1353 aa14.11□□□□□ -0.15
NEIL1-202ENST00000561643 CLUAP1Q96AJ1 413 aa14.11□□□□□ -0.15
NEIL1-202ENST00000561643 STK26Q9P289 416 aa14.11□□□□□ -0.15
NEIL1-202ENST00000561643 IDI1Q13907 227 aa14.1□□□□□ -0.15
NEIL1-202ENST00000561643 PUS7Q96PZ0 661 aaKnown RBP14.1□□□□□ -0.15
NEIL1-202ENST00000561643 NEO1Q92859 1461 aa14.1□□□□□ -0.15
NEIL1-202ENST00000561643 IGHDP01880 384 aa14.1□□□□□ -0.15
NEIL1-202ENST00000561643 U2AF1L5P0DN76 240 aaPredicted RBP14.1□□□□□ -0.15
NEIL1-202ENST00000561643 U2AF1Q01081 240 aaKnown RBP eCLIP14.1□□□□□ -0.15
NEIL1-202ENST00000561643 NFKBIBQ15653 356 aa14.1□□□□□ -0.15
NEIL1-202ENST00000561643 WDR63Q8IWG1 891 aa14.1□□□□□ -0.15
NEIL1-202ENST00000561643 SRPK2P78362 688 aaKnown RBP14.09□□□□□ -0.15
NEIL1-202ENST00000561643 SIGLEC1Q9BZZ2 1709 aa14.09□□□□□ -0.15
NEIL1-202ENST00000561643 NEXMIFQ5QGS0 1516 aa14.09□□□□□ -0.15
NEIL1-202ENST00000561643 TULP4Q9NRJ4 1543 aa14.09□□□□□ -0.15
NEIL1-202ENST00000561643 NSD2O96028 1365 aa14.09□□□□□ -0.15
NEIL1-202ENST00000561643 SLC4A3P48751 1232 aa14.09□□□□□ -0.15
NEIL1-202ENST00000561643 RARSP54136 660 aaKnown RBP14.09□□□□□ -0.15
NEIL1-202ENST00000561643 USP32Q8NFA0 1604 aa14.09□□□□□ -0.15
NEIL1-202ENST00000561643 IQSEC2Q5JU85 1478 aa14.08□□□□□ -0.15
NEIL1-202ENST00000561643 RSPH6AQ9H0K4 717 aa14.08□□□□□ -0.16
NEIL1-202ENST00000561643 PHF23Q9BUL5 403 aaPredicted RBP14.08□□□□□ -0.16
NEIL1-202ENST00000561643 BCL2L13Q9BXK5 485 aa14.08□□□□□ -0.16
NEIL1-202ENST00000561643 SLC52A1Q9NWF4 448 aa14.07□□□□□ -0.16
NEIL1-202ENST00000561643 DIP2CQ9Y2E4 1556 aa14.07□□□□□ -0.16
NEIL1-202ENST00000561643 PIK3C2BO00750 1634 aa14.07□□□□□ -0.16
NEIL1-202ENST00000561643 ARHGEF28Q8N1W1 1705 aaKnown RBP14.07□□□□□ -0.16
NEIL1-202ENST00000561643 CCDC27Q2M243 656 aa14.07□□□□□ -0.16
NEIL1-202ENST00000561643 MYH16Q9H6N6 1097 aa14.07□□□□□ -0.16
NEIL1-202ENST00000561643 ARHGAP31Q2M1Z3 1444 aa14.06□□□□□ -0.16
NEIL1-202ENST00000561643 U2SURPO15042 1029 aaKnown RBP14.05□□□□□ -0.16
NEIL1-202ENST00000561643 A0A1W2PP64 1363 aa14.05□□□□□ -0.16
NEIL1-202ENST00000561643 AEBP2Q6ZN18 517 aaPredicted RBP14.05□□□□□ -0.16
NEIL1-202ENST00000561643 GGNBP2Q9H3C7 697 aa14.05□□□□□ -0.16
NEIL1-202ENST00000561643 MLECQ14165 292 aa14.04□□□□□ -0.16
NEIL1-202ENST00000561643 POGKQ9P215 609 aa14.04□□□□□ -0.16
NEIL1-202ENST00000561643 MINK1Q8N4C8 1332 aaPredicted RBP14.04□□□□□ -0.16
NEIL1-202ENST00000561643 MAPK8IP3Q9UPT6 1336 aa14.04□□□□□ -0.16
NEIL1-202ENST00000561643 DNAJC5Q9H3Z4 198 aa14.03□□□□□ -0.16
NEIL1-202ENST00000561643 TNNQ9UQP3 1299 aa14.03□□□□□ -0.16
NEIL1-202ENST00000561643 YEATS2Q9ULM3 1422 aa14.03□□□□□ -0.16
NEIL1-202ENST00000561643 RLBP1P12271 317 aa14.03□□□□□ -0.16
NEIL1-202ENST00000561643 GLIPR1L2Q4G1C9 344 aa14.03□□□□□ -0.16
NEIL1-202ENST00000561643 PMFBP1Q8TBY8 1022 aa14.03□□□□□ -0.16
NEIL1-202ENST00000561643 ZFYVE9O95405 1425 aa14.03□□□□□ -0.16
NEIL1-202ENST00000561643 PRAM1Q96QH2 718 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms