RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 SOS2Q07890 1332 aaPredicted RBP37.61■■■■□ 3.61
NME3-202ENST00000561637 ADGRF5Q8IZF2 1346 aa37.59■■■■□ 3.61
NME3-202ENST00000561637 ROBO2Q9HCK4 1378 aa37.58■■■■□ 3.61
NME3-202ENST00000561637 USP21Q9UK80 565 aa37.58■■■■□ 3.61
NME3-202ENST00000561637 PTCH1Q13635 1447 aa37.56■■■■□ 3.6
NME3-202ENST00000561637 ATAD2Q6PL18 1390 aa37.55■■■■□ 3.6
NME3-202ENST00000561637 COL22A1Q8NFW1 1626 aaPredicted RBP37.52■■■■□ 3.6
NME3-202ENST00000561637 IFT172Q9UG01 1749 aa37.52■■■■□ 3.6
NME3-202ENST00000561637 FNBP4Q8N3X1 1017 aaPredicted RBP37.51■■■■□ 3.6
NME3-202ENST00000561637 TRPC5Q9UL62 973 aaPredicted RBP37.51■■■■□ 3.6
NME3-202ENST00000561637 EP400Q96L91 3159 aa37.5■■■■□ 3.59
NME3-202ENST00000561637 ATRNO75882 1429 aa37.49■■■■□ 3.59
NME3-202ENST00000561637 MARF1Q9Y4F3 1742 aaKnown RBP37.44■■■■□ 3.58
NME3-202ENST00000561637 PRAG1Q86YV5 1406 aa37.44■■■■□ 3.58
NME3-202ENST00000561637 ANKRD30BQ9BXX2 1392 aa37.42■■■■□ 3.58
NME3-202ENST00000561637 MYOM2P54296 1465 aa37.41■■■■□ 3.58
NME3-202ENST00000561637 BCL9LQ86UU0 1499 aa37.39■■■■□ 3.58
NME3-202ENST00000561637 ACIN1Q9UKV3 1341 aaKnown RBP37.38■■■■□ 3.58
NME3-202ENST00000561637 PIK3C2GO75747 1445 aa37.38■■■■□ 3.57
NME3-202ENST00000561637 TMEM132EQ6IEE7 984 aa37.36■■■■□ 3.57
NME3-202ENST00000561637 STK26Q9P289 416 aa37.36■■■■□ 3.57
NME3-202ENST00000561637 PXDNQ92626 1479 aa37.36■■■■□ 3.57
NME3-202ENST00000561637 ESCO1Q5FWF5 840 aa37.35■■■■□ 3.57
NME3-202ENST00000561637 ZRANB1Q9UGI0 708 aa37.35■■■■□ 3.57
NME3-202ENST00000561637 XPCQ01831 940 aaPredicted RBP37.33■■■■□ 3.57
NME3-202ENST00000561637 CDC42BPGQ6DT37 1551 aa37.33■■■■□ 3.57
NME3-202ENST00000561637 NPHP3Q7Z494 1330 aa37.33■■■■□ 3.57
NME3-202ENST00000561637 FOXO3O43524 673 aa37.29■■■■□ 3.56
NME3-202ENST00000561637 LRPPRCP42704 1394 aaKnown RBP37.29■■■■□ 3.56
NME3-202ENST00000561637 WAPLQ7Z5K2 1190 aa37.28■■■■□ 3.56
NME3-202ENST00000561637 PLEKHH1Q9ULM0 1364 aa37.28■■■■□ 3.56
NME3-202ENST00000561637 NRXN1Q9ULB1 1477 aa37.27■■■■□ 3.56
NME3-202ENST00000561637 GJD4Q96KN9 370 aaPredicted RBP37.27■■■■□ 3.56
NME3-202ENST00000561637 TECPR2O15040 1411 aa37.26■■■■□ 3.55
NME3-202ENST00000561637 TNKS1BP1Q9C0C2 1729 aaKnown RBP37.24■■■■□ 3.55
NME3-202ENST00000561637 CCDC125Q86Z20 511 aa37.24■■■■□ 3.55
NME3-202ENST00000561637 NUTM2FA1L443 756 aa37.23■■■■□ 3.55
NME3-202ENST00000561637 CFAP70Q5T0N1 1121 aa37.23■■■■□ 3.55
NME3-202ENST00000561637 YTHDC2Q9H6S0 1430 aaKnown RBP37.21■■■■□ 3.55
NME3-202ENST00000561637 BRWD3Q6RI45 1802 aa37.21■■■■□ 3.55
NME3-202ENST00000561637 GLI3P10071 1580 aa37.21■■■■□ 3.55
NME3-202ENST00000561637 ABCC11Q96J66 1382 aa37.2■■■■□ 3.55
NME3-202ENST00000561637 KNDC1Q76NI1 1749 aa37.2■■■■□ 3.55
NME3-202ENST00000561637 HRCP23327 699 aa37.2■■■■□ 3.55
NME3-202ENST00000561637 C14orf93Q9H972 538 aaKnown RBP37.2■■■■□ 3.55
NME3-202ENST00000561637 RALGAPBQ86X10 1494 aa37.16■■■■□ 3.54
NME3-202ENST00000561637 SLIT2O94813 1529 aa37.15■■■■□ 3.54
NME3-202ENST00000561637 UNC5CLQ8IV45 518 aa37.14■■■■□ 3.54
NME3-202ENST00000561637 FMN2Q9NZ56 1722 aa37.13■■■■□ 3.54
NME3-202ENST00000561637 KDM2AQ9Y2K7 1162 aa37.11■■■■□ 3.53
NME3-202ENST00000561637 SPATA31A3Q5VYP0 1347 aa37.1■■■■□ 3.53
NME3-202ENST00000561637 RGPD8O14715 1765 aaPredicted RBP37.09■■■■□ 3.53
NME3-202ENST00000561637 USP32Q8NFA0 1604 aa37.09■■■■□ 3.53
NME3-202ENST00000561637 BLMP54132 1417 aaPredicted RBP37.09■■■■□ 3.53
NME3-202ENST00000561637 DHX57Q6P158 1386 aaKnown RBP37.06■■■■□ 3.52
NME3-202ENST00000561637 KIF1AQ12756 1690 aa37.06■■■■□ 3.52
NME3-202ENST00000561637 DEFB132Q7Z7B7 95 aa37.06■■■■□ 3.52
NME3-202ENST00000561637 DCAF11Q8TEB1 546 aa37.06■■■■□ 3.52
NME3-202ENST00000561637 ADGRB1O14514 1584 aa37.04■■■■□ 3.52
NME3-202ENST00000561637 SAFB2Q14151 953 aaKnown RBP eCLIP37.03■■■■□ 3.52
NME3-202ENST00000561637 KRT28Q7Z3Y7 464 aa37.02■■■■□ 3.52
NME3-202ENST00000561637 PRAM1Q96QH2 718 aa37■■■■□ 3.51
NME3-202ENST00000561637 PLCH1Q4KWH8 1693 aa36.99■■■■□ 3.51
NME3-202ENST00000561637 SEPT12Q8IYM1 358 aa36.98■■■■□ 3.51
NME3-202ENST00000561637 CABLES1Q8TDN4 633 aa36.98■■■■□ 3.51
NME3-202ENST00000561637 SIRT1Q96EB6 747 aa36.98■■■■□ 3.51
NME3-202ENST00000561637 ABCA3Q99758 1704 aa36.95■■■■□ 3.51
NME3-202ENST00000561637 NWD2Q9ULI1 1742 aa36.94■■■■□ 3.5
NME3-202ENST00000561637 PLEKHG5O94827 1062 aa36.94■■■■□ 3.5
NME3-202ENST00000561637 DLC1Q96QB1 1528 aa36.94■■■■□ 3.5
NME3-202ENST00000561637 TNS3Q68CZ2 1445 aa36.93■■■■□ 3.5
NME3-202ENST00000561637 VPS72Q15906 364 aa36.93■■■■□ 3.5
NME3-202ENST00000561637 TRAK1Q9UPV9 953 aa36.93■■■■□ 3.5
NME3-202ENST00000561637 HAP1P54257 671 aaPredicted RBP36.9■■■■□ 3.5
NME3-202ENST00000561637 PHF8Q9UPP1 1060 aa36.9■■■■□ 3.5
NME3-202ENST00000561637 SF3B2Q13435 895 aaKnown RBP36.89■■■■□ 3.5
NME3-202ENST00000561637 ONECUT3O60422 494 aaPredicted RBP36.88■■■■□ 3.49
NME3-202ENST00000561637 POGKQ9P215 609 aa36.88■■■■□ 3.49
NME3-202ENST00000561637 CCDC9Q9Y3X0 531 aaKnown RBP36.87■■■■□ 3.49
NME3-202ENST00000561637 LRP5O75197 1615 aa36.87■■■■□ 3.49
NME3-202ENST00000561637 PSME1Q06323 249 aa36.84■■■■□ 3.49
NME3-202ENST00000561637 KRT27Q7Z3Y8 459 aa36.84■■■■□ 3.49
NME3-202ENST00000561637 HIRIP3Q9BW71 556 aaPredicted RBP36.84■■■■□ 3.49
NME3-202ENST00000561637 LMOD2Q6P5Q4 547 aa36.82■■■■□ 3.48
NME3-202ENST00000561637 SBNO1A3KN83 1393 aa36.81■■■■□ 3.48
NME3-202ENST00000561637 MINK1Q8N4C8 1332 aaPredicted RBP36.81■■■■□ 3.48
NME3-202ENST00000561637 NRAPQ86VF7 1730 aa36.8■■■■□ 3.48
NME3-202ENST00000561637 FAM83GA6ND36 823 aa36.8■■■■□ 3.48
NME3-202ENST00000561637 ADGRB2O60241 1585 aa36.79■■■■□ 3.48
NME3-202ENST00000561637 STAC3Q96MF2 364 aa36.78■■■■□ 3.48
NME3-202ENST00000561637 PSDA5PKW4 1024 aaPredicted RBP36.77■■■■□ 3.48
NME3-202ENST00000561637 ARHGEF28Q8N1W1 1705 aaKnown RBP36.75■■■■□ 3.47
NME3-202ENST00000561637 ARHGEF10O15013 1369 aa36.75■■■■□ 3.47
NME3-202ENST00000561637 PMFBP1Q8TBY8 1022 aa36.73■■■■□ 3.47
NME3-202ENST00000561637 PRR36Q9H6K5 1346 aa36.73■■■■□ 3.47
NME3-202ENST00000561637 A0A0G2JS52 829 aa36.72■■■■□ 3.47
NME3-202ENST00000561637 MYT1Q01538 1121 aa36.72■■■■□ 3.47
NME3-202ENST00000561637 TRPM3Q9HCF6 1732 aaPredicted RBP36.72■■■■□ 3.47
NME3-202ENST00000561637 FAM98CQ17RN3 349 aaKnown RBP36.71■■■■□ 3.47
NME3-202ENST00000561637 SIN3AQ96ST3 1273 aa36.71■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 173.3 ms