RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 CCDC144AA2RUR9 1427 aa12.64□□□□□ -0.39
PALB2-202ENST00000561514 TRIM52Q96A61 297 aa12.64□□□□□ -0.39
PALB2-202ENST00000561514 ORAI2Q96SN7 254 aa12.64□□□□□ -0.39
PALB2-202ENST00000561514 LRPPRCP42704 1394 aaKnown RBP12.64□□□□□ -0.39
PALB2-202ENST00000561514 ABCC11Q96J66 1382 aa12.64□□□□□ -0.39
PALB2-202ENST00000561514 ADGRF5Q8IZF2 1346 aa12.63□□□□□ -0.39
PALB2-202ENST00000561514 PIK3C2GO75747 1445 aa12.63□□□□□ -0.39
PALB2-202ENST00000561514 COL22A1Q8NFW1 1626 aaPredicted RBP12.63□□□□□ -0.39
PALB2-202ENST00000561514 MSH5O43196 834 aa12.63□□□□□ -0.39
PALB2-202ENST00000561514 RBM6P78332 1123 aaKnown RBP12.63□□□□□ -0.39
PALB2-202ENST00000561514 PXDNQ92626 1479 aa12.63□□□□□ -0.39
PALB2-202ENST00000561514 FNBP4Q8N3X1 1017 aaPredicted RBP12.62□□□□□ -0.39
PALB2-202ENST00000561514 C8orf37Q96NL8 207 aa12.61□□□□□ -0.39
PALB2-202ENST00000561514 NPHP3Q7Z494 1330 aa12.61□□□□□ -0.39
PALB2-202ENST00000561514 NRXN1Q9ULB1 1477 aa12.6□□□□□ -0.39
PALB2-202ENST00000561514 QTRT2Q9H974 415 aaKnown RBP12.6□□□□□ -0.39
PALB2-202ENST00000561514 ATRNO75882 1429 aa12.6□□□□□ -0.39
PALB2-202ENST00000561514 ACIN1Q9UKV3 1341 aaKnown RBP12.6□□□□□ -0.39
PALB2-202ENST00000561514 SIRT1Q96EB6 747 aa12.59□□□□□ -0.39
PALB2-202ENST00000561514 MPHOSPH9Q99550 1183 aa12.59□□□□□ -0.39
PALB2-202ENST00000561514 KNDC1Q76NI1 1749 aa12.58□□□□□ -0.4
PALB2-202ENST00000561514 IFT172Q9UG01 1749 aa12.58□□□□□ -0.4
PALB2-202ENST00000561514 PLEKHH1Q9ULM0 1364 aa12.57□□□□□ -0.4
PALB2-202ENST00000561514 YTHDC2Q9H6S0 1430 aaKnown RBP12.57□□□□□ -0.4
PALB2-202ENST00000561514 ADAMTS2O95450 1211 aa12.57□□□□□ -0.4
PALB2-202ENST00000561514 NGLY1Q96IV0 654 aa12.57□□□□□ -0.4
PALB2-202ENST00000561514 BCL9LQ86UU0 1499 aa12.57□□□□□ -0.4
PALB2-202ENST00000561514 TRPC5Q9UL62 973 aaPredicted RBP12.56□□□□□ -0.4
PALB2-202ENST00000561514 ESCO1Q5FWF5 840 aa12.55□□□□□ -0.4
PALB2-202ENST00000561514 WAPLQ7Z5K2 1190 aa12.55□□□□□ -0.4
PALB2-202ENST00000561514 C14orf93Q9H972 538 aaKnown RBP12.55□□□□□ -0.4
PALB2-202ENST00000561514 USP21Q9UK80 565 aa12.55□□□□□ -0.4
PALB2-202ENST00000561514 ATAD2Q6PL18 1390 aa12.55□□□□□ -0.4
PALB2-202ENST00000561514 SLIT2O94813 1529 aa12.53□□□□□ -0.4
PALB2-202ENST00000561514 FOXO3O43524 673 aa12.53□□□□□ -0.4
PALB2-202ENST00000561514 RGL3Q3MIN7 710 aa12.53□□□□□ -0.4
PALB2-202ENST00000561514 TMEM132EQ6IEE7 984 aa12.53□□□□□ -0.4
PALB2-202ENST00000561514 SPATA31A3Q5VYP0 1347 aa12.53□□□□□ -0.4
PALB2-202ENST00000561514 KIF1AQ12756 1690 aa12.52□□□□□ -0.4
PALB2-202ENST00000561514 FMN2Q9NZ56 1722 aa12.52□□□□□ -0.41
PALB2-202ENST00000561514 DLC1Q96QB1 1528 aa12.52□□□□□ -0.41
PALB2-202ENST00000561514 STK26Q9P289 416 aa12.51□□□□□ -0.41
PALB2-202ENST00000561514 SRCAPQ6ZRS2 3230 aa12.51□□□□□ -0.41
PALB2-202ENST00000561514 SBNO1A3KN83 1393 aa12.5□□□□□ -0.41
PALB2-202ENST00000561514 TNS3Q68CZ2 1445 aa12.5□□□□□ -0.41
PALB2-202ENST00000561514 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.49□□□□□ -0.41
PALB2-202ENST00000561514 ADGRB1O14514 1584 aa12.49□□□□□ -0.41
PALB2-202ENST00000561514 ADGRB2O60241 1585 aa12.49□□□□□ -0.41
PALB2-202ENST00000561514 ANKARQ7Z5J8 1434 aa12.49□□□□□ -0.41
PALB2-202ENST00000561514 DHX57Q6P158 1386 aaKnown RBP12.49□□□□□ -0.41
PALB2-202ENST00000561514 XPCQ01831 940 aaPredicted RBP12.49□□□□□ -0.41
PALB2-202ENST00000561514 GJD4Q96KN9 370 aaPredicted RBP12.48□□□□□ -0.41
PALB2-202ENST00000561514 USP32Q8NFA0 1604 aa12.48□□□□□ -0.41
PALB2-202ENST00000561514 RALGAPBQ86X10 1494 aa12.47□□□□□ -0.41
PALB2-202ENST00000561514 EP400Q96L91 3159 aa12.47□□□□□ -0.41
PALB2-202ENST00000561514 CFAP70Q5T0N1 1121 aa12.47□□□□□ -0.41
PALB2-202ENST00000561514 UNC5CLQ8IV45 518 aa12.47□□□□□ -0.41
PALB2-202ENST00000561514 PHF8Q9UPP1 1060 aa12.47□□□□□ -0.41
PALB2-202ENST00000561514 RAB3GAP2Q9H2M9 1393 aa12.46□□□□□ -0.41
PALB2-202ENST00000561514 NUTM2FA1L443 756 aa12.46□□□□□ -0.41
PALB2-202ENST00000561514 KRT28Q7Z3Y7 464 aa12.46□□□□□ -0.41
PALB2-202ENST00000561514 CCDC125Q86Z20 511 aa12.46□□□□□ -0.41
PALB2-202ENST00000561514 GLI3P10071 1580 aa12.46□□□□□ -0.42
PALB2-202ENST00000561514 MARF1Q9Y4F3 1742 aaKnown RBP12.45□□□□□ -0.42
PALB2-202ENST00000561514 ARHGEF10O15013 1369 aa12.45□□□□□ -0.42
PALB2-202ENST00000561514 PRAM1Q96QH2 718 aa12.45□□□□□ -0.42
PALB2-202ENST00000561514 STAC3Q96MF2 364 aa12.44□□□□□ -0.42
PALB2-202ENST00000561514 ONECUT3O60422 494 aaPredicted RBP12.43□□□□□ -0.42
PALB2-202ENST00000561514 PSME1Q06323 249 aa12.43□□□□□ -0.42
PALB2-202ENST00000561514 VPS72Q15906 364 aa12.43□□□□□ -0.42
PALB2-202ENST00000561514 HRCP23327 699 aa12.42□□□□□ -0.42
PALB2-202ENST00000561514 BLMP54132 1417 aaPredicted RBP12.42□□□□□ -0.42
PALB2-202ENST00000561514 EIF3AQ14152 1382 aaKnown RBP12.42□□□□□ -0.42
PALB2-202ENST00000561514 TULP4Q9NRJ4 1543 aa12.41□□□□□ -0.42
PALB2-202ENST00000561514 PRR36Q9H6K5 1346 aa12.4□□□□□ -0.42
PALB2-202ENST00000561514 ABCA3Q99758 1704 aa12.4□□□□□ -0.43
PALB2-202ENST00000561514 NWD2Q9ULI1 1742 aa12.4□□□□□ -0.43
PALB2-202ENST00000561514 PPP4R3CPQ6ZMV5 832 aa12.39□□□□□ -0.43
PALB2-202ENST00000561514 TRPM3Q9HCF6 1732 aaPredicted RBP12.39□□□□□ -0.43
PALB2-202ENST00000561514 CABLES1Q8TDN4 633 aa12.38□□□□□ -0.43
PALB2-202ENST00000561514 POGKQ9P215 609 aa12.38□□□□□ -0.43
PALB2-202ENST00000561514 WASLO00401 505 aaPredicted RBP12.37□□□□□ -0.43
PALB2-202ENST00000561514 SAFB2Q14151 953 aaKnown RBP eCLIP12.37□□□□□ -0.43
PALB2-202ENST00000561514 SEPT12Q8IYM1 358 aa12.37□□□□□ -0.43
PALB2-202ENST00000561514 ZRANB1Q9UGI0 708 aa12.37□□□□□ -0.43
PALB2-202ENST00000561514 ALS2Q96Q42 1657 aa12.37□□□□□ -0.43
PALB2-202ENST00000561514 PLCH1Q4KWH8 1693 aa12.36□□□□□ -0.43
PALB2-202ENST00000561514 ATP7BP35670 1465 aa12.36□□□□□ -0.43
PALB2-202ENST00000561514 GPRASP1Q5JY77 1395 aa12.36□□□□□ -0.43
PALB2-202ENST00000561514 FAM83GA6ND36 823 aa12.36□□□□□ -0.43
PALB2-202ENST00000561514 TRAK1Q9UPV9 953 aa12.36□□□□□ -0.43
PALB2-202ENST00000561514 PMFBP1Q8TBY8 1022 aa12.35□□□□□ -0.43
PALB2-202ENST00000561514 NRAPQ86VF7 1730 aa12.34□□□□□ -0.43
PALB2-202ENST00000561514 HAP1P54257 671 aaPredicted RBP12.34□□□□□ -0.43
PALB2-202ENST00000561514 DCAF11Q8TEB1 546 aa12.34□□□□□ -0.43
PALB2-202ENST00000561514 HIRIP3Q9BW71 556 aaPredicted RBP12.34□□□□□ -0.43
PALB2-202ENST00000561514 MINK1Q8N4C8 1332 aaPredicted RBP12.34□□□□□ -0.43
PALB2-202ENST00000561514 RGPD8O14715 1765 aaPredicted RBP12.33□□□□□ -0.44
PALB2-202ENST00000561514 CRYBG1Q9Y4K1 1723 aa12.33□□□□□ -0.44
PALB2-202ENST00000561514 POLR3AO14802 1390 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms