RNA–Protein interactions for RNA: ENST00000561393.5

AP4E1-205, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,024 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-205ENST00000561393 CCDC61Q9Y6R9 512 aa20.79■□□□□ 0.92
AP4E1-205ENST00000561393 TSR2Q969E8 191 aaKnown RBP20.79■□□□□ 0.92
AP4E1-205ENST00000561393 CARD14Q9BXL6 1004 aa20.79■□□□□ 0.92
AP4E1-205ENST00000561393 ATP10AO60312 1499 aa20.78■□□□□ 0.92
AP4E1-205ENST00000561393 COL17A1Q9UMD9 1497 aaPredicted RBP20.78■□□□□ 0.92
AP4E1-205ENST00000561393 PPP6R1Q9UPN7 881 aa20.78■□□□□ 0.92
AP4E1-205ENST00000561393 EIF2AK4Q9P2K8 1649 aaKnown RBP20.78■□□□□ 0.92
AP4E1-205ENST00000561393 NLRP6P59044 892 aa20.77■□□□□ 0.92
AP4E1-205ENST00000561393 PDE4AP27815 886 aa20.77■□□□□ 0.92
AP4E1-205ENST00000561393 BECN1Q14457 450 aa20.77■□□□□ 0.92
AP4E1-205ENST00000561393 RRS1Q15050 365 aaKnown RBP20.76■□□□□ 0.91
AP4E1-205ENST00000561393 WWC1Q8IX03 1113 aa20.76■□□□□ 0.91
AP4E1-205ENST00000561393 NPATQ14207 1427 aa20.75■□□□□ 0.91
AP4E1-205ENST00000561393 SLFN5Q08AF3 891 aa20.75■□□□□ 0.91
AP4E1-205ENST00000561393 CDC42BPBQ9Y5S2 1711 aa20.75■□□□□ 0.91
AP4E1-205ENST00000561393 YEATS2Q9ULM3 1422 aa20.74■□□□□ 0.91
AP4E1-205ENST00000561393 FBLN1P23142 703 aa20.74■□□□□ 0.91
AP4E1-205ENST00000561393 EXOSC9Q06265 439 aaKnown RBP20.74■□□□□ 0.91
AP4E1-205ENST00000561393 PSME1Q06323 249 aa20.74■□□□□ 0.91
AP4E1-205ENST00000561393 CSB-PGBD3P0DP91 1061 aa20.73■□□□□ 0.91
AP4E1-205ENST00000561393 SLC4A10Q6U841 1118 aa20.73■□□□□ 0.91
AP4E1-205ENST00000561393 DZIP1LQ8IYY4 767 aaKnown RBP20.73■□□□□ 0.91
AP4E1-205ENST00000561393 NME9Q86XW9 330 aa20.72■□□□□ 0.91
AP4E1-205ENST00000561393 ARXQ96QS3 562 aa20.71■□□□□ 0.91
AP4E1-205ENST00000561393 UGGT1Q9NYU2 1555 aa20.71■□□□□ 0.91
AP4E1-205ENST00000561393 ZNF692Q9BU19 519 aaPredicted RBP20.71■□□□□ 0.91
AP4E1-205ENST00000561393 WASLO00401 505 aaPredicted RBP20.71■□□□□ 0.91
AP4E1-205ENST00000561393 C20orf194Q5TEA3 1177 aa20.71■□□□□ 0.91
AP4E1-205ENST00000561393 CLASP1Q7Z460 1538 aa20.71■□□□□ 0.91
AP4E1-205ENST00000561393 STK31Q9BXU1 1019 aa20.7■□□□□ 0.9
AP4E1-205ENST00000561393 NEO1Q92859 1461 aa20.7■□□□□ 0.9
AP4E1-205ENST00000561393 KDM5DQ9BY66 1539 aa20.69■□□□□ 0.9
AP4E1-205ENST00000561393 ASXL1Q8IXJ9 1541 aa20.69■□□□□ 0.9
AP4E1-205ENST00000561393 DUSP27Q5VZP5 1158 aa20.68■□□□□ 0.9
AP4E1-205ENST00000561393 ABTB2Q8N961 1025 aa20.68■□□□□ 0.9
AP4E1-205ENST00000561393 RBM33Q96EV2 1170 aaKnown RBP20.68■□□□□ 0.9
AP4E1-205ENST00000561393 SULT6B1Q6IMI4 303 aa20.68■□□□□ 0.9
AP4E1-205ENST00000561393 ZFYVE16Q7Z3T8 1539 aa20.67■□□□□ 0.9
AP4E1-205ENST00000561393 IPO9Q96P70 1041 aaKnown RBP20.67■□□□□ 0.9
AP4E1-205ENST00000561393 EMILIN1Q9Y6C2 1016 aa20.67■□□□□ 0.9
AP4E1-205ENST00000561393 AMOTL2Q9Y2J4 779 aa20.67■□□□□ 0.9
AP4E1-205ENST00000561393 KDM5CP41229 1560 aa20.67■□□□□ 0.9
AP4E1-205ENST00000561393 TNRQ92752 1358 aa20.66■□□□□ 0.9
AP4E1-205ENST00000561393 TMPOP42166 694 aaKnown RBP20.66■□□□□ 0.9
AP4E1-205ENST00000561393 GNAI1P63096 354 aa20.66■□□□□ 0.9
AP4E1-205ENST00000561393 WDR63Q8IWG1 891 aa20.66■□□□□ 0.9
AP4E1-205ENST00000561393 FYB1O15117 783 aa20.65■□□□□ 0.9
AP4E1-205ENST00000561393 CROCC2H7BZ55 1655 aa20.65■□□□□ 0.9
AP4E1-205ENST00000561393 ESCO1Q5FWF5 840 aa20.65■□□□□ 0.9
AP4E1-205ENST00000561393 ANKLE2Q86XL3 938 aa20.64■□□□□ 0.89
AP4E1-205ENST00000561393 NECTIN2Q92692 538 aa20.64■□□□□ 0.89
AP4E1-205ENST00000561393 THUMPD2Q9BTF0 503 aaKnown RBP20.64■□□□□ 0.89
AP4E1-205ENST00000561393 RIMS2Q9UQ26 1411 aa20.63■□□□□ 0.89
AP4E1-205ENST00000561393 DDX19BQ9UMR2 479 aa20.63■□□□□ 0.89
AP4E1-205ENST00000561393 ZMYM3Q14202 1370 aa20.63■□□□□ 0.89
AP4E1-205ENST00000561393 PLXNC1O60486 1568 aa20.62■□□□□ 0.89
AP4E1-205ENST00000561393 ANKRD36BQ8N2N9 1353 aa20.62■□□□□ 0.89
AP4E1-205ENST00000561393 FAM161AQ3B820 660 aa20.62■□□□□ 0.89
AP4E1-205ENST00000561393 SKAP1Q86WV1 359 aa20.62■□□□□ 0.89
AP4E1-205ENST00000561393 MLH3Q9UHC1 1453 aa20.61■□□□□ 0.89
AP4E1-205ENST00000561393 OS9Q13438 667 aaPredicted RBP20.61■□□□□ 0.89
AP4E1-205ENST00000561393 SPRYD3Q8NCJ5 442 aa20.61■□□□□ 0.89
AP4E1-205ENST00000561393 PTPRTO14522 1441 aa20.61■□□□□ 0.89
AP4E1-205ENST00000561393 FCHSD2O94868 740 aa20.61■□□□□ 0.89
AP4E1-205ENST00000561393 PDE3AQ14432 1141 aa20.6■□□□□ 0.89
AP4E1-205ENST00000561393 KIF16BQ96L93 1317 aa20.6■□□□□ 0.89
AP4E1-205ENST00000561393 LRPPRCP42704 1394 aaKnown RBP20.59■□□□□ 0.89
AP4E1-205ENST00000561393 SHROOM2Q13796 1616 aa20.59■□□□□ 0.89
AP4E1-205ENST00000561393 TRPM2O94759 1503 aa20.59■□□□□ 0.89
AP4E1-205ENST00000561393 MFAP1P55081 439 aaKnown RBP20.59■□□□□ 0.89
AP4E1-205ENST00000561393 NCKAP5LQ9HCH0 1330 aa20.59■□□□□ 0.89
AP4E1-205ENST00000561393 CASC1Q6TDU7 716 aa20.58■□□□□ 0.89
AP4E1-205ENST00000561393 PROSER2Q86WR7 435 aaPredicted RBP20.58■□□□□ 0.89
AP4E1-205ENST00000561393 FANCIQ9NVI1 1328 aa20.58■□□□□ 0.89
AP4E1-205ENST00000561393 TSPYL4Q9UJ04 414 aa20.58■□□□□ 0.88
AP4E1-205ENST00000561393 SLC4A3P48751 1232 aa20.57■□□□□ 0.88
AP4E1-205ENST00000561393 ANKRD45Q5TZF3 282 aa20.57■□□□□ 0.88
AP4E1-205ENST00000561393 PRDM15P57071 1507 aaPredicted RBP20.57■□□□□ 0.88
AP4E1-205ENST00000561393 PLEKHH1Q9ULM0 1364 aa20.57■□□□□ 0.88
AP4E1-205ENST00000561393 IQGAP3Q86VI3 1631 aa20.56■□□□□ 0.88
AP4E1-205ENST00000561393 TEFQ10587 303 aa20.56■□□□□ 0.88
AP4E1-205ENST00000561393 YTHDC2Q9H6S0 1430 aaKnown RBP20.56■□□□□ 0.88
AP4E1-205ENST00000561393 ZRANB1Q9UGI0 708 aa20.56■□□□□ 0.88
AP4E1-205ENST00000561393 ARAP3Q8WWN8 1544 aa20.56■□□□□ 0.88
AP4E1-205ENST00000561393 XPCQ01831 940 aaPredicted RBP20.56■□□□□ 0.88
AP4E1-205ENST00000561393 NOB1Q9ULX3 412 aaKnown RBP20.56■□□□□ 0.88
AP4E1-205ENST00000561393 NSD2O96028 1365 aa20.55■□□□□ 0.88
AP4E1-205ENST00000561393 EIF2S2P20042 333 aaKnown RBP20.55■□□□□ 0.88
AP4E1-205ENST00000561393 A0A1W2PP64 1363 aa20.55■□□□□ 0.88
AP4E1-205ENST00000561393 TWISTNBQ3B726 338 aaPredicted RBP20.55■□□□□ 0.88
AP4E1-205ENST00000561393 DCTN1Q14203 1278 aa20.54■□□□□ 0.88
AP4E1-205ENST00000561393 MAGI2Q86UL8 1455 aa20.54■□□□□ 0.88
AP4E1-205ENST00000561393 API5Q9BZZ5 524 aaKnown RBP20.54■□□□□ 0.88
AP4E1-205ENST00000561393 RARSP54136 660 aaKnown RBP20.53■□□□□ 0.88
AP4E1-205ENST00000561393 SLKQ9H2G2 1235 aaPredicted RBP20.53■□□□□ 0.88
AP4E1-205ENST00000561393 NFE2L2Q16236 605 aa20.53■□□□□ 0.88
AP4E1-205ENST00000561393 ATF3P18847 181 aa20.53■□□□□ 0.88
AP4E1-205ENST00000561393 NINLQ9Y2I6 1382 aa20.53■□□□□ 0.88
AP4E1-205ENST00000561393 UNC13BO14795 1591 aa20.52■□□□□ 0.88
AP4E1-205ENST00000561393 PIK3C2GO75747 1445 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms