RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 PRR20CP86479 221 aa12.23□□□□□ -0.45
HMBOX1-216ENST00000561377 PRR20DP86480 221 aa12.23□□□□□ -0.45
HMBOX1-216ENST00000561377 PRR20BP86481 221 aa12.23□□□□□ -0.45
HMBOX1-216ENST00000561377 PRR20AP86496 221 aa12.23□□□□□ -0.45
HMBOX1-216ENST00000561377 GIGYF2Q6Y7W6 1299 aaKnown RBP12.23□□□□□ -0.45
HMBOX1-216ENST00000561377 MMP16P51512 607 aa12.22□□□□□ -0.45
HMBOX1-216ENST00000561377 AK7Q96M32 723 aa12.22□□□□□ -0.45
HMBOX1-216ENST00000561377 CD2BP2O95400 341 aaKnown RBP12.21□□□□□ -0.45
HMBOX1-216ENST00000561377 GUCA2AQ02747 115 aa12.21□□□□□ -0.45
HMBOX1-216ENST00000561377 TRIM66O15016 1216 aa12.2□□□□□ -0.46
HMBOX1-216ENST00000561377 ZBTB24O43167 697 aaPredicted RBP12.2□□□□□ -0.46
HMBOX1-216ENST00000561377 GDF9O60383 454 aa12.19□□□□□ -0.46
HMBOX1-216ENST00000561377 DXOO77932 396 aaKnown RBP12.18□□□□□ -0.46
HMBOX1-216ENST00000561377 FDX1P10109 184 aa12.18□□□□□ -0.46
HMBOX1-216ENST00000561377 SPIRE2Q8WWL2 714 aa12.18□□□□□ -0.46
HMBOX1-216ENST00000561377 TNFRSF10AO00220 468 aa12.17□□□□□ -0.46
HMBOX1-216ENST00000561377 PARP9Q8IXQ6 854 aa12.17□□□□□ -0.46
HMBOX1-216ENST00000561377 LCE2BO14633 110 aa12.16□□□□□ -0.46
HMBOX1-216ENST00000561377 RETREG3Q86VR2 466 aa12.16□□□□□ -0.46
HMBOX1-216ENST00000561377 BEGAINQ9BUH8 593 aa12.16□□□□□ -0.46
HMBOX1-216ENST00000561377 PKDCCQ504Y2 493 aa12.15□□□□□ -0.46
HMBOX1-216ENST00000561377 DGAT1O75907 488 aa12.14□□□□□ -0.47
HMBOX1-216ENST00000561377 FOXC1Q12948 553 aa12.14□□□□□ -0.47
HMBOX1-216ENST00000561377 DIXDC1Q155Q3 683 aa12.14□□□□□ -0.47
HMBOX1-216ENST00000561377 SYMPKQ92797 1274 aaKnown RBP12.14□□□□□ -0.47
HMBOX1-216ENST00000561377 JUNDP17535 347 aa12.13□□□□□ -0.47
HMBOX1-216ENST00000561377 PKD2L1Q9P0L9 805 aa12.13□□□□□ -0.47
HMBOX1-216ENST00000561377 MOXD2PA6NHM9 499 aa12.12□□□□□ -0.47
HMBOX1-216ENST00000561377 C6orf229H3BNL8 230 aa12.12□□□□□ -0.47
HMBOX1-216ENST00000561377 CCDC24Q8N4L8 307 aa12.12□□□□□ -0.47
HMBOX1-216ENST00000561377 PCDHGC3Q9UN70 934 aa12.12□□□□□ -0.47
HMBOX1-216ENST00000561377 FAM187AA6NFU0 413 aa12.11□□□□□ -0.47
HMBOX1-216ENST00000561377 NDUFV2P19404 249 aa12.11□□□□□ -0.47
HMBOX1-216ENST00000561377 SLC24A1O60721 1099 aa12.1□□□□□ -0.47
HMBOX1-216ENST00000561377 SLC24A3Q9HC58 644 aa12.1□□□□□ -0.47
HMBOX1-216ENST00000561377 MS4A1P11836 297 aa12.09□□□□□ -0.47
HMBOX1-216ENST00000561377 PDE4DQ08499 809 aa12.09□□□□□ -0.47
HMBOX1-216ENST00000561377 TRIM32Q13049 653 aa12.09□□□□□ -0.47
HMBOX1-216ENST00000561377 BCANQ96GW7 911 aa12.09□□□□□ -0.47
HMBOX1-216ENST00000561377 TBC1D2Q9BYX2 928 aa12.09□□□□□ -0.47
HMBOX1-216ENST00000561377 GJA5P36382 358 aa12.07□□□□□ -0.48
HMBOX1-216ENST00000561377 CYP4X1Q8N118 509 aa12.07□□□□□ -0.48
HMBOX1-216ENST00000561377 NUDT12Q9BQG2 462 aa12.06□□□□□ -0.48
HMBOX1-216ENST00000561377 SPDYE5A6NIY4 337 aa12.05□□□□□ -0.48
HMBOX1-216ENST00000561377 MYT1Q01538 1121 aa12.05□□□□□ -0.48
HMBOX1-216ENST00000561377 MTMR2Q13614 643 aa12.05□□□□□ -0.48
HMBOX1-216ENST00000561377 WNT7AO00755 349 aa12.04□□□□□ -0.48
HMBOX1-216ENST00000561377 RSBN1LQ6PCB5 846 aaPredicted RBP12.04□□□□□ -0.48
HMBOX1-216ENST00000561377 TOR4AQ9NXH8 423 aa12.04□□□□□ -0.48
HMBOX1-216ENST00000561377 PRR7Q8TB68 274 aa12.02□□□□□ -0.49
HMBOX1-216ENST00000561377 SPTLC1O15269 473 aa12.01□□□□□ -0.49
HMBOX1-216ENST00000561377 TTC24A2A3L6 582 aaPredicted RBP12□□□□□ -0.49
HMBOX1-216ENST00000561377 CCNYL3P0C7X3 344 aa12□□□□□ -0.49
HMBOX1-216ENST00000561377 WNT7BP56706 349 aa12□□□□□ -0.49
HMBOX1-216ENST00000561377 PTPRNQ16849 979 aa12□□□□□ -0.49
HMBOX1-216ENST00000561377 ZNF787Q6DD87 383 aa11.99□□□□□ -0.49
HMBOX1-216ENST00000561377 DESI1Q6ICB0 168 aa11.99□□□□□ -0.49
HMBOX1-216ENST00000561377 RIC3Q7Z5B4 369 aa11.99□□□□□ -0.49
HMBOX1-216ENST00000561377 ZBTB3Q9H5J0 574 aa11.98□□□□□ -0.49
HMBOX1-216ENST00000561377 SNIP1Q8TAD8 396 aaKnown RBP11.97□□□□□ -0.49
HMBOX1-216ENST00000561377 MRGPRX2Q96LB1 330 aa11.97□□□□□ -0.49
HMBOX1-216ENST00000561377 PCDHB15Q9Y5E8 787 aa11.97□□□□□ -0.49
HMBOX1-216ENST00000561377 SKOR1P84550 965 aa11.96□□□□□ -0.49
HMBOX1-216ENST00000561377 RC3H1Q5TC82 1133 aaKnown RBP11.96□□□□□ -0.49
HMBOX1-216ENST00000561377 PRPF38BQ5VTL8 546 aaKnown RBP11.96□□□□□ -0.49
HMBOX1-216ENST00000561377 PTCRAQ6ISU1 281 aaPredicted RBP11.96□□□□□ -0.49
HMBOX1-216ENST00000561377 AVPP01185 164 aa11.95□□□□□ -0.5
HMBOX1-216ENST00000561377 HRCP23327 699 aa11.95□□□□□ -0.5
HMBOX1-216ENST00000561377 EVA1BQ9NVM1 165 aa11.95□□□□□ -0.5
HMBOX1-216ENST00000561377 MYSM1Q5VVJ2 828 aa11.94□□□□□ -0.5
HMBOX1-216ENST00000561377 AAASQ9NRG9 546 aa11.94□□□□□ -0.5
HMBOX1-216ENST00000561377 KCNH2Q12809 1159 aa11.93□□□□□ -0.5
HMBOX1-216ENST00000561377 CRIPAKQ8N1N5 446 aa11.93□□□□□ -0.5
HMBOX1-216ENST00000561377 ST8SIA5O15466 376 aa11.92□□□□□ -0.5
HMBOX1-216ENST00000561377 CSPP1Q1MSJ5 1256 aa11.92□□□□□ -0.5
HMBOX1-216ENST00000561377 CTC1Q2NKJ3 1217 aa11.92□□□□□ -0.5
HMBOX1-216ENST00000561377 TUSC1Q2TAM9 212 aa11.92□□□□□ -0.5
HMBOX1-216ENST00000561377 UNC93B1Q9H1C4 597 aa11.92□□□□□ -0.5
HMBOX1-216ENST00000561377 LYPD8Q6UX82 237 aa11.91□□□□□ -0.5
HMBOX1-216ENST00000561377 RSPH6AQ9H0K4 717 aa11.91□□□□□ -0.5
HMBOX1-216ENST00000561377 CFAP99D6REC4 459 aa11.9□□□□□ -0.5
HMBOX1-216ENST00000561377 AXIN1O15169 862 aa11.9□□□□□ -0.5
HMBOX1-216ENST00000561377 SMPD1P17405 629 aa11.9□□□□□ -0.5
HMBOX1-216ENST00000561377 CABLES1Q8TDN4 633 aa11.9□□□□□ -0.5
HMBOX1-216ENST00000561377 LIMD1Q9UGP4 676 aa11.9□□□□□ -0.5
HMBOX1-216ENST00000561377 NUTM2BA6NNL0 878 aaPredicted RBP11.89□□□□□ -0.51
HMBOX1-216ENST00000561377 NUTM2EB1AL46 878 aaPredicted RBP11.89□□□□□ -0.51
HMBOX1-216ENST00000561377 SMCPP49901 116 aaPredicted RBP11.89□□□□□ -0.51
HMBOX1-216ENST00000561377 NUTM2DQ5VT03 806 aaPredicted RBP11.89□□□□□ -0.51
HMBOX1-216ENST00000561377 NUTM2AQ8IVF1 878 aaPredicted RBP11.89□□□□□ -0.51
HMBOX1-216ENST00000561377 EHBP1Q8NDI1 1231 aa11.89□□□□□ -0.51
HMBOX1-216ENST00000561377 SH3BP2P78314 561 aa11.88□□□□□ -0.51
HMBOX1-216ENST00000561377 J3QL48 77 aa11.87□□□□□ -0.51
HMBOX1-216ENST00000561377 CTHP32929 405 aa11.87□□□□□ -0.51
HMBOX1-216ENST00000561377 CLK2P49760 499 aaKnown RBP11.87□□□□□ -0.51
HMBOX1-216ENST00000561377 LILRB3O75022 631 aa11.85□□□□□ -0.51
HMBOX1-216ENST00000561377 QPCTQ16769 361 aa11.85□□□□□ -0.51
HMBOX1-216ENST00000561377 LINC01559Q495D7 138 aa11.85□□□□□ -0.51
HMBOX1-216ENST00000561377 BAP1Q92560 729 aa11.85□□□□□ -0.51
HMBOX1-216ENST00000561377 TSC1Q92574 1164 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms