RNA–Protein interactions for RNA: ENST00000561225.1

MARK3-225, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-225ENST00000561225 LMTK2Q8IWU2 1503 aa12.4□□□□□ -0.42
MARK3-225ENST00000561225 KANK1Q14678 1352 aa12.4□□□□□ -0.42
MARK3-225ENST00000561225 SHPRHQ149N8 1683 aa12.39□□□□□ -0.43
MARK3-225ENST00000561225 NCOA3Q9Y6Q9 1424 aa12.39□□□□□ -0.43
MARK3-225ENST00000561225 PLEKHG1Q9ULL1 1385 aa12.38□□□□□ -0.43
MARK3-225ENST00000561225 ZFYVE9O95405 1425 aa12.37□□□□□ -0.43
MARK3-225ENST00000561225 SLC52A1Q9NWF4 448 aa12.37□□□□□ -0.43
MARK3-225ENST00000561225 CHD2O14647 1828 aaKnown RBP12.37□□□□□ -0.43
MARK3-225ENST00000561225 ABCC5O15440 1437 aa12.37□□□□□ -0.43
MARK3-225ENST00000561225 AFF2P51816 1311 aa12.37□□□□□ -0.43
MARK3-225ENST00000561225 DIP2AQ14689 1571 aa12.36□□□□□ -0.43
MARK3-225ENST00000561225 NUTM2BA6NNL0 878 aaPredicted RBP12.36□□□□□ -0.43
MARK3-225ENST00000561225 NUTM2EB1AL46 878 aaPredicted RBP12.36□□□□□ -0.43
MARK3-225ENST00000561225 CADPS2Q86UW7 1296 aa12.36□□□□□ -0.43
MARK3-225ENST00000561225 NUTM2AQ8IVF1 878 aaPredicted RBP12.36□□□□□ -0.43
MARK3-225ENST00000561225 ZBTB47Q9UFB7 747 aaPredicted RBP12.36□□□□□ -0.43
MARK3-225ENST00000561225 RGS12O14924 1447 aa12.36□□□□□ -0.43
MARK3-225ENST00000561225 KANK4Q5T7N3 995 aaPredicted RBP12.35□□□□□ -0.43
MARK3-225ENST00000561225 C14orf37Q86TY3 774 aa12.35□□□□□ -0.43
MARK3-225ENST00000561225 C19orf44Q9H6X5 657 aa12.35□□□□□ -0.43
MARK3-225ENST00000561225 TBX22Q9Y458 520 aa12.35□□□□□ -0.43
MARK3-225ENST00000561225 ATF3P18847 181 aa12.34□□□□□ -0.43
MARK3-225ENST00000561225 ATN1P54259 1190 aaPredicted RBP12.34□□□□□ -0.43
MARK3-225ENST00000561225 BRINP3Q76B58 766 aa12.34□□□□□ -0.43
MARK3-225ENST00000561225 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.34□□□□□ -0.43
MARK3-225ENST00000561225 CROCC2H7BZ55 1655 aa12.33□□□□□ -0.44
MARK3-225ENST00000561225 PPP1R15AO75807 674 aaPredicted RBP12.33□□□□□ -0.44
MARK3-225ENST00000561225 RIMS2Q9UQ26 1411 aa12.33□□□□□ -0.44
MARK3-225ENST00000561225 EP400Q96L91 3159 aa12.32□□□□□ -0.44
MARK3-225ENST00000561225 DAPK1P53355 1430 aa12.31□□□□□ -0.44
MARK3-225ENST00000561225 ADAMTS13Q76LX8 1427 aa12.31□□□□□ -0.44
MARK3-225ENST00000561225 SETD5Q9C0A6 1442 aa12.31□□□□□ -0.44
MARK3-225ENST00000561225 HDGFP51858 240 aaKnown RBP12.31□□□□□ -0.44
MARK3-225ENST00000561225 RBM6P78332 1123 aaKnown RBP12.31□□□□□ -0.44
MARK3-225ENST00000561225 TSPYL2Q9H2G4 693 aaPredicted RBP12.31□□□□□ -0.44
MARK3-225ENST00000561225 QTRT2Q9H974 415 aaKnown RBP12.31□□□□□ -0.44
MARK3-225ENST00000561225 VPS8Q8N3P4 1428 aa12.3□□□□□ -0.44
MARK3-225ENST00000561225 RPRD2Q5VT52 1461 aaKnown RBP12.3□□□□□ -0.44
MARK3-225ENST00000561225 NUTM2DQ5VT03 806 aaPredicted RBP12.3□□□□□ -0.44
MARK3-225ENST00000561225 PIK3R4Q99570 1358 aa12.3□□□□□ -0.44
MARK3-225ENST00000561225 ASXL1Q8IXJ9 1541 aa12.29□□□□□ -0.44
MARK3-225ENST00000561225 C8orf37Q96NL8 207 aa12.29□□□□□ -0.44
MARK3-225ENST00000561225 TMEM131LA2VDJ0 1609 aa12.29□□□□□ -0.44
MARK3-225ENST00000561225 ANKRD30AQ9BXX3 1397 aa12.29□□□□□ -0.44
MARK3-225ENST00000561225 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.28□□□□□ -0.44
MARK3-225ENST00000561225 CHIC2Q9UKJ5 165 aa12.28□□□□□ -0.44
MARK3-225ENST00000561225 PTPN23Q9H3S7 1636 aa12.28□□□□□ -0.44
MARK3-225ENST00000561225 GCC2Q8IWJ2 1684 aa12.28□□□□□ -0.44
MARK3-225ENST00000561225 DCCP43146 1447 aa12.28□□□□□ -0.44
MARK3-225ENST00000561225 MYO5BQ9ULV0 1848 aa12.27□□□□□ -0.44
MARK3-225ENST00000561225 LRRC59Q96AG4 307 aaKnown RBP12.27□□□□□ -0.45
MARK3-225ENST00000561225 ATAD2Q6PL18 1390 aa12.27□□□□□ -0.45
MARK3-225ENST00000561225 PTPRUQ92729 1446 aa12.27□□□□□ -0.45
MARK3-225ENST00000561225 AMOTL2Q9Y2J4 779 aa12.26□□□□□ -0.45
MARK3-225ENST00000561225 CCDC61Q9Y6R9 512 aa12.26□□□□□ -0.45
MARK3-225ENST00000561225 PNPLA6Q8IY17 1366 aa12.26□□□□□ -0.45
MARK3-225ENST00000561225 MST1RQ04912 1400 aa12.26□□□□□ -0.45
MARK3-225ENST00000561225 NHSL1Q5SYE7 1610 aa12.26□□□□□ -0.45
MARK3-225ENST00000561225 POTEFA5A3E0 1075 aa12.24□□□□□ -0.45
MARK3-225ENST00000561225 TRPM2O94759 1503 aa12.24□□□□□ -0.45
MARK3-225ENST00000561225 CHGAP10645 457 aaKnown RBP12.24□□□□□ -0.45
MARK3-225ENST00000561225 DDX17Q92841 729 aaKnown RBP12.24□□□□□ -0.45
MARK3-225ENST00000561225 NGLY1Q96IV0 654 aa12.24□□□□□ -0.45
MARK3-225ENST00000561225 SETBP1Q9Y6X0 1596 aa12.24□□□□□ -0.45
MARK3-225ENST00000561225 KIF12Q96FN5 646 aa12.23□□□□□ -0.45
MARK3-225ENST00000561225 ADAMTS2O95450 1211 aa12.22□□□□□ -0.45
MARK3-225ENST00000561225 BMP2KQ9NSY1 1161 aaPredicted RBP12.22□□□□□ -0.45
MARK3-225ENST00000561225 ADGRL2O95490 1459 aa12.21□□□□□ -0.45
MARK3-225ENST00000561225 ANKRD50Q9ULJ7 1429 aa12.2□□□□□ -0.46
MARK3-225ENST00000561225 UNC13BO14795 1591 aa12.2□□□□□ -0.46
MARK3-225ENST00000561225 XRN1Q8IZH2 1706 aaKnown RBP12.2□□□□□ -0.46
MARK3-225ENST00000561225 USP21Q9UK80 565 aa12.19□□□□□ -0.46
MARK3-225ENST00000561225 TRPC5Q9UL62 973 aaPredicted RBP12.19□□□□□ -0.46
MARK3-225ENST00000561225 CDAN1Q8IWY9 1227 aa12.18□□□□□ -0.46
MARK3-225ENST00000561225 FNBP4Q8N3X1 1017 aaPredicted RBP12.18□□□□□ -0.46
MARK3-225ENST00000561225 ADGRL3Q9HAR2 1447 aa12.18□□□□□ -0.46
MARK3-225ENST00000561225 CCDC125Q86Z20 511 aa12.17□□□□□ -0.46
MARK3-225ENST00000561225 KLHL34Q8N239 644 aa12.17□□□□□ -0.46
MARK3-225ENST00000561225 TRPC6Q9Y210 931 aa12.17□□□□□ -0.46
MARK3-225ENST00000561225 NRXN3Q9Y4C0 1643 aa12.17□□□□□ -0.46
MARK3-225ENST00000561225 ATRNO75882 1429 aa12.17□□□□□ -0.46
MARK3-225ENST00000561225 TIE1P35590 1138 aa12.16□□□□□ -0.46
MARK3-225ENST00000561225 METP08581 1390 aa12.16□□□□□ -0.46
MARK3-225ENST00000561225 C1orf167Q5SNV9 1468 aa12.15□□□□□ -0.46
MARK3-225ENST00000561225 SOS2Q07890 1332 aaPredicted RBP12.15□□□□□ -0.46
MARK3-225ENST00000561225 PTCH1Q13635 1447 aa12.15□□□□□ -0.46
MARK3-225ENST00000561225 SEC24BO95487 1268 aa12.15□□□□□ -0.46
MARK3-225ENST00000561225 E9PCH4 1651 aa12.15□□□□□ -0.46
MARK3-225ENST00000561225 LAMC1P11047 1609 aa12.14□□□□□ -0.47
MARK3-225ENST00000561225 MAP3K13O43283 966 aa12.13□□□□□ -0.47
MARK3-225ENST00000561225 VASPP50552 380 aaPredicted RBP12.13□□□□□ -0.47
MARK3-225ENST00000561225 NALCNQ8IZF0 1738 aa12.13□□□□□ -0.47
MARK3-225ENST00000561225 ORAI2Q96SN7 254 aa12.12□□□□□ -0.47
MARK3-225ENST00000561225 BCL9LQ86UU0 1499 aa12.12□□□□□ -0.47
MARK3-225ENST00000561225 COLQQ9Y215 455 aaPredicted RBP12.11□□□□□ -0.47
MARK3-225ENST00000561225 MYOM2P54296 1465 aa12.1□□□□□ -0.47
MARK3-225ENST00000561225 LOC105371045A0A1W2PR82 267 aa12.1□□□□□ -0.47
MARK3-225ENST00000561225 COL22A1Q8NFW1 1626 aaPredicted RBP12.1□□□□□ -0.47
MARK3-225ENST00000561225 BLMP54132 1417 aaPredicted RBP12.1□□□□□ -0.47
MARK3-225ENST00000561225 IQGAP3Q86VI3 1631 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms