RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 PIK3C2GO75747 1445 aa40.16■■■■■ 4.02
SNRPA1-215ENST00000561187 NUTM2FA1L443 756 aa40.14■■■■■ 4.02
SNRPA1-215ENST00000561187 LRPPRCP42704 1394 aaKnown RBP40.13■■■■■ 4.02
SNRPA1-215ENST00000561187 PLEKHH1Q9ULM0 1364 aa40.13■■■■■ 4.02
SNRPA1-215ENST00000561187 ADAMTS2O95450 1211 aa40.13■■■■■ 4.01
SNRPA1-215ENST00000561187 RAB3GAP2Q9H2M9 1393 aa40.12■■■■■ 4.01
SNRPA1-215ENST00000561187 RXRBP28702 533 aa40.11■■■■■ 4.01
SNRPA1-215ENST00000561187 ESCO1Q5FWF5 840 aa40.11■■■■■ 4.01
SNRPA1-215ENST00000561187 SOS2Q07890 1332 aaPredicted RBP40.11■■■■■ 4.01
SNRPA1-215ENST00000561187 TECPR2O15040 1411 aa40.1■■■■■ 4.01
SNRPA1-215ENST00000561187 KNDC1Q76NI1 1749 aa40.09■■■■■ 4.01
SNRPA1-215ENST00000561187 XPCQ01831 940 aaPredicted RBP40.06■■■■■ 4
SNRPA1-215ENST00000561187 YTHDC2Q9H6S0 1430 aaKnown RBP40.05■■■■■ 4
SNRPA1-215ENST00000561187 ABCC11Q96J66 1382 aa40.03■■■■■ 4
SNRPA1-215ENST00000561187 NGLY1Q96IV0 654 aa40.01■■■■■ 4
SNRPA1-215ENST00000561187 NPHP3Q7Z494 1330 aa39.99■■■■□ 3.99
SNRPA1-215ENST00000561187 FOXO3O43524 673 aa39.98■■■■□ 3.99
SNRPA1-215ENST00000561187 CFAP70Q5T0N1 1121 aa39.98■■■■□ 3.99
SNRPA1-215ENST00000561187 MYOM2P54296 1465 aa39.97■■■■□ 3.99
SNRPA1-215ENST00000561187 PXDNQ92626 1479 aa39.97■■■■□ 3.99
SNRPA1-215ENST00000561187 QTRT2Q9H974 415 aaKnown RBP39.97■■■■□ 3.99
SNRPA1-215ENST00000561187 FMN2Q9NZ56 1722 aa39.96■■■■□ 3.99
SNRPA1-215ENST00000561187 ACIN1Q9UKV3 1341 aaKnown RBP39.95■■■■□ 3.99
SNRPA1-215ENST00000561187 NRXN1Q9ULB1 1477 aa39.95■■■■□ 3.99
SNRPA1-215ENST00000561187 RGS12O14924 1447 aa39.94■■■■□ 3.98
SNRPA1-215ENST00000561187 COL22A1Q8NFW1 1626 aaPredicted RBP39.94■■■■□ 3.98
SNRPA1-215ENST00000561187 CDK12Q9NYV4 1490 aaPredicted RBP39.94■■■■□ 3.98
SNRPA1-215ENST00000561187 UPF1Q92900 1129 aaKnown RBP eCLIP39.93■■■■□ 3.98
SNRPA1-215ENST00000561187 C14orf93Q9H972 538 aaKnown RBP39.93■■■■□ 3.98
SNRPA1-215ENST00000561187 SAFB2Q14151 953 aaKnown RBP eCLIP39.92■■■■□ 3.98
SNRPA1-215ENST00000561187 RBM6P78332 1123 aaKnown RBP39.88■■■■□ 3.97
SNRPA1-215ENST00000561187 DHX57Q6P158 1386 aaKnown RBP39.87■■■■□ 3.97
SNRPA1-215ENST00000561187 USP21Q9UK80 565 aa39.87■■■■□ 3.97
SNRPA1-215ENST00000561187 PRAM1Q96QH2 718 aa39.83■■■■□ 3.97
SNRPA1-215ENST00000561187 KIF1AQ12756 1690 aa39.83■■■■□ 3.97
SNRPA1-215ENST00000561187 RGPD8O14715 1765 aaPredicted RBP39.82■■■■□ 3.97
SNRPA1-215ENST00000561187 KDM2AQ9Y2K7 1162 aa39.8■■■■□ 3.96
SNRPA1-215ENST00000561187 PLEKHG5O94827 1062 aa39.76■■■■□ 3.96
SNRPA1-215ENST00000561187 SIRT1Q96EB6 747 aa39.76■■■■□ 3.96
SNRPA1-215ENST00000561187 MARF1Q9Y4F3 1742 aaKnown RBP39.75■■■■□ 3.95
SNRPA1-215ENST00000561187 POGKQ9P215 609 aa39.75■■■■□ 3.95
SNRPA1-215ENST00000561187 TRPC5Q9UL62 973 aaPredicted RBP39.75■■■■□ 3.95
SNRPA1-215ENST00000561187 FNBP4Q8N3X1 1017 aaPredicted RBP39.74■■■■□ 3.95
SNRPA1-215ENST00000561187 ADGRB1O14514 1584 aa39.74■■■■□ 3.95
SNRPA1-215ENST00000561187 KRT28Q7Z3Y7 464 aa39.73■■■■□ 3.95
SNRPA1-215ENST00000561187 DCAF11Q8TEB1 546 aa39.72■■■■□ 3.95
SNRPA1-215ENST00000561187 PHF8Q9UPP1 1060 aa39.72■■■■□ 3.95
SNRPA1-215ENST00000561187 ATRNO75882 1429 aa39.72■■■■□ 3.95
SNRPA1-215ENST00000561187 DLC1Q96QB1 1528 aa39.71■■■■□ 3.95
SNRPA1-215ENST00000561187 SPATA31A3Q5VYP0 1347 aa39.71■■■■□ 3.95
SNRPA1-215ENST00000561187 TRAK1Q9UPV9 953 aa39.71■■■■□ 3.95
SNRPA1-215ENST00000561187 HIRIP3Q9BW71 556 aaPredicted RBP39.69■■■■□ 3.94
SNRPA1-215ENST00000561187 BCL9LQ86UU0 1499 aa39.66■■■■□ 3.94
SNRPA1-215ENST00000561187 USP32Q8NFA0 1604 aa39.65■■■■□ 3.94
SNRPA1-215ENST00000561187 TNS3Q68CZ2 1445 aa39.65■■■■□ 3.94
SNRPA1-215ENST00000561187 PMFBP1Q8TBY8 1022 aa39.64■■■■□ 3.94
SNRPA1-215ENST00000561187 MINK1Q8N4C8 1332 aaPredicted RBP39.64■■■■□ 3.94
SNRPA1-215ENST00000561187 LMOD2Q6P5Q4 547 aa39.63■■■■□ 3.93
SNRPA1-215ENST00000561187 ADGRB2O60241 1585 aa39.63■■■■□ 3.93
SNRPA1-215ENST00000561187 HAP1P54257 671 aaPredicted RBP39.61■■■■□ 3.93
SNRPA1-215ENST00000561187 CABLES1Q8TDN4 633 aa39.61■■■■□ 3.93
SNRPA1-215ENST00000561187 PSME1Q06323 249 aa39.57■■■■□ 3.93
SNRPA1-215ENST00000561187 ATAD2Q6PL18 1390 aa39.57■■■■□ 3.92
SNRPA1-215ENST00000561187 ANKARQ7Z5J8 1434 aa39.57■■■■□ 3.92
SNRPA1-215ENST00000561187 ABCA3Q99758 1704 aa39.52■■■■□ 3.92
SNRPA1-215ENST00000561187 TNKS1BP1Q9C0C2 1729 aaKnown RBP39.52■■■■□ 3.92
SNRPA1-215ENST00000561187 SLIT2O94813 1529 aa39.52■■■■□ 3.92
SNRPA1-215ENST00000561187 HRCP23327 699 aa39.52■■■■□ 3.92
SNRPA1-215ENST00000561187 SBNO1A3KN83 1393 aa39.51■■■■□ 3.92
SNRPA1-215ENST00000561187 PRR36Q9H6K5 1346 aa39.51■■■■□ 3.92
SNRPA1-215ENST00000561187 GJD4Q96KN9 370 aaPredicted RBP39.51■■■■□ 3.92
SNRPA1-215ENST00000561187 UNC5CLQ8IV45 518 aa39.49■■■■□ 3.91
SNRPA1-215ENST00000561187 ARHGEF28Q8N1W1 1705 aaKnown RBP39.48■■■■□ 3.91
SNRPA1-215ENST00000561187 TULP4Q9NRJ4 1543 aa39.48■■■■□ 3.91
SNRPA1-215ENST00000561187 EP400Q96L91 3159 aa39.48■■■■□ 3.91
SNRPA1-215ENST00000561187 GLI3P10071 1580 aa39.47■■■■□ 3.91
SNRPA1-215ENST00000561187 RALGAPBQ86X10 1494 aa39.47■■■■□ 3.91
SNRPA1-215ENST00000561187 ARHGEF10O15013 1369 aa39.46■■■■□ 3.91
SNRPA1-215ENST00000561187 PLCH1Q4KWH8 1693 aa39.46■■■■□ 3.91
SNRPA1-215ENST00000561187 WASLO00401 505 aaPredicted RBP39.44■■■■□ 3.9
SNRPA1-215ENST00000561187 TRPM3Q9HCF6 1732 aaPredicted RBP39.44■■■■□ 3.9
SNRPA1-215ENST00000561187 EIF3AQ14152 1382 aaKnown RBP39.43■■■■□ 3.9
SNRPA1-215ENST00000561187 GPRASP1Q5JY77 1395 aa39.39■■■■□ 3.9
SNRPA1-215ENST00000561187 STAC3Q96MF2 364 aa39.39■■■■□ 3.9
SNRPA1-215ENST00000561187 CCDC9Q9Y3X0 531 aaKnown RBP39.38■■■■□ 3.89
SNRPA1-215ENST00000561187 NGDNQ8NEJ9 315 aaKnown RBP39.36■■■■□ 3.89
SNRPA1-215ENST00000561187 ALS2Q96Q42 1657 aa39.35■■■■□ 3.89
SNRPA1-215ENST00000561187 ATP7BP35670 1465 aa39.33■■■■□ 3.89
SNRPA1-215ENST00000561187 NWD2Q9ULI1 1742 aa39.33■■■■□ 3.89
SNRPA1-215ENST00000561187 PAK3O75914 559 aaPredicted RBP39.32■■■■□ 3.89
SNRPA1-215ENST00000561187 FAM83GA6ND36 823 aa39.3■■■■□ 3.88
SNRPA1-215ENST00000561187 ITSN1Q15811 1721 aa39.3■■■■□ 3.88
SNRPA1-215ENST00000561187 BRWD3Q6RI45 1802 aa39.3■■■■□ 3.88
SNRPA1-215ENST00000561187 VPS72Q15906 364 aa39.29■■■■□ 3.88
SNRPA1-215ENST00000561187 NUDT16Q96DE0 195 aaKnown RBP39.27■■■■□ 3.88
SNRPA1-215ENST00000561187 SEPT12Q8IYM1 358 aa39.26■■■■□ 3.88
SNRPA1-215ENST00000561187 NBPF1Q3BBV0 1214 aa39.25■■■■□ 3.87
SNRPA1-215ENST00000561187 NRAPQ86VF7 1730 aa39.25■■■■□ 3.87
SNRPA1-215ENST00000561187 KIAA1210Q9ULL0 1709 aa39.25■■■■□ 3.87
SNRPA1-215ENST00000561187 CDK19Q9BWU1 502 aa39.24■■■■□ 3.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms