RNA–Protein interactions for RNA: ENST00000561174.1

AC009558.1-201, humanhuman

TSL 4 BASIC

Gene AC009558.1, Length 581 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009558.1-201ENST00000561174 KDM4AO75164 1064 aa11.88□□□□□ -0.51
AC009558.1-201ENST00000561174 MDM2Q00987 491 aaPredicted RBP11.87□□□□□ -0.51
AC009558.1-201ENST00000561174 MINK1Q8N4C8 1332 aaPredicted RBP11.86□□□□□ -0.51
AC009558.1-201ENST00000561174 MMP16P51512 607 aa11.85□□□□□ -0.51
AC009558.1-201ENST00000561174 CRIPAKQ8N1N5 446 aa11.85□□□□□ -0.51
AC009558.1-201ENST00000561174 USB1Q9BQ65 265 aaKnown RBP11.85□□□□□ -0.51
AC009558.1-201ENST00000561174 TTC24A2A3L6 582 aaPredicted RBP11.84□□□□□ -0.51
AC009558.1-201ENST00000561174 AVPP01185 164 aa11.84□□□□□ -0.51
AC009558.1-201ENST00000561174 VSIG10Q8N0Z9 540 aa11.84□□□□□ -0.51
AC009558.1-201ENST00000561174 USP46P62068 366 aa11.83□□□□□ -0.52
AC009558.1-201ENST00000561174 AXIN1O15169 862 aa11.81□□□□□ -0.52
AC009558.1-201ENST00000561174 CTC1Q2NKJ3 1217 aa11.81□□□□□ -0.52
AC009558.1-201ENST00000561174 CCDC102AQ96A19 550 aa11.81□□□□□ -0.52
AC009558.1-201ENST00000561174 DACH1Q9UI36 760 aa11.81□□□□□ -0.52
AC009558.1-201ENST00000561174 WNT7AO00755 349 aa11.8□□□□□ -0.52
AC009558.1-201ENST00000561174 DXOO77932 396 aaKnown RBP11.8□□□□□ -0.52
AC009558.1-201ENST00000561174 TRIM32Q13049 653 aa11.8□□□□□ -0.52
AC009558.1-201ENST00000561174 HLA-CQ95604 372 aa11.8□□□□□ -0.52
AC009558.1-201ENST00000561174 HOXA2O43364 376 aa11.79□□□□□ -0.52
AC009558.1-201ENST00000561174 SNIP1Q8TAD8 396 aaKnown RBP11.79□□□□□ -0.52
AC009558.1-201ENST00000561174 GPCPD1Q9NPB8 672 aa11.79□□□□□ -0.52
AC009558.1-201ENST00000561174 SMCPP49901 116 aaPredicted RBP11.78□□□□□ -0.52
AC009558.1-201ENST00000561174 CCDC24Q8N4L8 307 aa11.78□□□□□ -0.52
AC009558.1-201ENST00000561174 CLCN1P35523 988 aa11.77□□□□□ -0.53
AC009558.1-201ENST00000561174 KRI1Q8N9T8 703 aaKnown RBP11.76□□□□□ -0.53
AC009558.1-201ENST00000561174 GMPR2Q9P2T1 348 aaKnown RBP11.76□□□□□ -0.53
AC009558.1-201ENST00000561174 GUCA2AQ02747 115 aa11.75□□□□□ -0.53
AC009558.1-201ENST00000561174 MRGPRX2Q96LB1 330 aa11.75□□□□□ -0.53
AC009558.1-201ENST00000561174 FAM217BQ9NTX9 383 aaPredicted RBP11.75□□□□□ -0.53
AC009558.1-201ENST00000561174 SMPD1P17405 629 aa11.74□□□□□ -0.53
AC009558.1-201ENST00000561174 NUTM1Q86Y26 1132 aa11.74□□□□□ -0.53
AC009558.1-201ENST00000561174 C11orf95C9JLR9 678 aaPredicted RBP11.73□□□□□ -0.53
AC009558.1-201ENST00000561174 TREML4Q6UXN2 200 aa11.73□□□□□ -0.53
AC009558.1-201ENST00000561174 REPIN1Q9BWE0 567 aaKnown RBP11.73□□□□□ -0.53
AC009558.1-201ENST00000561174 J3QL48 77 aa11.71□□□□□ -0.53
AC009558.1-201ENST00000561174 SYMPKQ92797 1274 aaKnown RBP11.71□□□□□ -0.53
AC009558.1-201ENST00000561174 JUNDP17535 347 aa11.7□□□□□ -0.54
AC009558.1-201ENST00000561174 RC3H1Q5TC82 1133 aaKnown RBP11.7□□□□□ -0.54
AC009558.1-201ENST00000561174 SKOR1P84550 965 aa11.69□□□□□ -0.54
AC009558.1-201ENST00000561174 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.69□□□□□ -0.54
AC009558.1-201ENST00000561174 WNT7BP56706 349 aa11.68□□□□□ -0.54
AC009558.1-201ENST00000561174 RETREG3Q86VR2 466 aa11.68□□□□□ -0.54
AC009558.1-201ENST00000561174 ATP13A2Q9NQ11 1180 aa11.66□□□□□ -0.54
AC009558.1-201ENST00000561174 FDX1P10109 184 aa11.65□□□□□ -0.54
AC009558.1-201ENST00000561174 LCE2AQ5TA79 106 aaPredicted RBP11.65□□□□□ -0.54
AC009558.1-201ENST00000561174 HPS1Q92902 700 aa11.65□□□□□ -0.54
AC009558.1-201ENST00000561174 NUDT12Q9BQG2 462 aa11.65□□□□□ -0.54
AC009558.1-201ENST00000561174 SSTR3P32745 418 aaPredicted RBP11.64□□□□□ -0.55
AC009558.1-201ENST00000561174 C6orf229H3BNL8 230 aa11.63□□□□□ -0.55
AC009558.1-201ENST00000561174 WFS1O76024 890 aa11.63□□□□□ -0.55
AC009558.1-201ENST00000561174 PCDHGC3Q9UN70 934 aa11.63□□□□□ -0.55
AC009558.1-201ENST00000561174 PTCRAQ6ISU1 281 aaPredicted RBP11.62□□□□□ -0.55
AC009558.1-201ENST00000561174 ALDH1A1P00352 501 aa11.61□□□□□ -0.55
AC009558.1-201ENST00000561174 SENP2Q9HC62 589 aa11.61□□□□□ -0.55
AC009558.1-201ENST00000561174 SPIRE2Q8WWL2 714 aa11.6□□□□□ -0.55
AC009558.1-201ENST00000561174 MS4A1P11836 297 aa11.59□□□□□ -0.55
AC009558.1-201ENST00000561174 SNRPBP14678 240 aaKnown RBP11.59□□□□□ -0.55
AC009558.1-201ENST00000561174 TTLL12Q14166 644 aaPredicted RBP11.59□□□□□ -0.55
AC009558.1-201ENST00000561174 EHBP1Q8NDI1 1231 aa11.59□□□□□ -0.55
AC009558.1-201ENST00000561174 NDUFV2P19404 249 aa11.58□□□□□ -0.56
AC009558.1-201ENST00000561174 TRIM47Q96LD4 638 aa11.58□□□□□ -0.56
AC009558.1-201ENST00000561174 CCNYL3P0C7X3 344 aa11.57□□□□□ -0.56
AC009558.1-201ENST00000561174 BARGINQ6ZT62 677 aa11.57□□□□□ -0.56
AC009558.1-201ENST00000561174 SIAH2O43255 324 aa11.56□□□□□ -0.56
AC009558.1-201ENST00000561174 ZMYND10O75800 440 aa11.56□□□□□ -0.56
AC009558.1-201ENST00000561174 NFX1Q12986 1120 aaKnown RBP11.56□□□□□ -0.56
AC009558.1-201ENST00000561174 KIFC2Q96AC6 838 aa11.56□□□□□ -0.56
AC009558.1-201ENST00000561174 MOXD2PA6NHM9 499 aa11.55□□□□□ -0.56
AC009558.1-201ENST00000561174 SH3BP2P78314 561 aa11.54□□□□□ -0.56
AC009558.1-201ENST00000561174 AMHR2Q16671 573 aa11.54□□□□□ -0.56
AC009558.1-201ENST00000561174 PTPRNQ16849 979 aa11.54□□□□□ -0.56
AC009558.1-201ENST00000561174 WASF2Q9Y6W5 498 aa11.54□□□□□ -0.56
AC009558.1-201ENST00000561174 PRR7Q8TB68 274 aa11.53□□□□□ -0.56
AC009558.1-201ENST00000561174 UNC93B1Q9H1C4 597 aa11.53□□□□□ -0.56
AC009558.1-201ENST00000561174 EVA1BQ9NVM1 165 aa11.53□□□□□ -0.56
AC009558.1-201ENST00000561174 GIGYF2Q6Y7W6 1299 aaKnown RBP11.52□□□□□ -0.57
AC009558.1-201ENST00000561174 MTMR2Q13614 643 aa11.51□□□□□ -0.57
AC009558.1-201ENST00000561174 ZC3H15Q8WU90 426 aaKnown RBP11.51□□□□□ -0.57
AC009558.1-201ENST00000561174 TERTO14746 1132 aaKnown RBP11.5□□□□□ -0.57
AC009558.1-201ENST00000561174 KCNH2Q12809 1159 aa11.5□□□□□ -0.57
AC009558.1-201ENST00000561174 BAP1Q92560 729 aa11.5□□□□□ -0.57
AC009558.1-201ENST00000561174 BEGAINQ9BUH8 593 aa11.5□□□□□ -0.57
AC009558.1-201ENST00000561174 SPDYE5A6NIY4 337 aa11.49□□□□□ -0.57
AC009558.1-201ENST00000561174 LINC01559Q495D7 138 aa11.49□□□□□ -0.57
AC009558.1-201ENST00000561174 CAPN5O15484 640 aaPredicted RBP11.48□□□□□ -0.57
AC009558.1-201ENST00000561174 DESI1Q6ICB0 168 aa11.48□□□□□ -0.57
AC009558.1-201ENST00000561174 WIPF1O43516 503 aa11.47□□□□□ -0.57
AC009558.1-201ENST00000561174 TBC1D2Q9BYX2 928 aa11.47□□□□□ -0.57
AC009558.1-201ENST00000561174 INSM1Q01101 510 aaPredicted RBP11.46□□□□□ -0.57
AC009558.1-201ENST00000561174 DIXDC1Q155Q3 683 aa11.46□□□□□ -0.57
AC009558.1-201ENST00000561174 ZNF511Q8NB15 262 aa11.45□□□□□ -0.58
AC009558.1-201ENST00000561174 BMP1P13497 986 aa11.44□□□□□ -0.58
AC009558.1-201ENST00000561174 VARSP26640 1264 aaKnown RBP11.44□□□□□ -0.58
AC009558.1-201ENST00000561174 GJA5P36382 358 aa11.44□□□□□ -0.58
AC009558.1-201ENST00000561174 PLEKHG3A1L390 1219 aa11.43□□□□□ -0.58
AC009558.1-201ENST00000561174 RSBN1LQ6PCB5 846 aaPredicted RBP11.43□□□□□ -0.58
AC009558.1-201ENST00000561174 TRIM46Q7Z4K8 759 aa11.43□□□□□ -0.58
AC009558.1-201ENST00000561174 TLL2Q9Y6L7 1015 aa11.43□□□□□ -0.58
AC009558.1-201ENST00000561174 CTHP32929 405 aa11.42□□□□□ -0.58
AC009558.1-201ENST00000561174 LCE2CQ5TA81 110 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms