RNA–Protein interactions for RNA: ENST00000561081.5

LRRC49-227, Transcript of leucine rich repeat containing 49, humanhuman

TSL 2

Gene LRRC49, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-227ENST00000561081 RRP1P56182 461 aaKnown RBP14.09□□□□□ -0.15
LRRC49-227ENST00000561081 POLR3AO14802 1390 aaPredicted RBP14.09□□□□□ -0.15
LRRC49-227ENST00000561081 PLEKHH1Q9ULM0 1364 aa14.09□□□□□ -0.15
LRRC49-227ENST00000561081 SAFB2Q14151 953 aaKnown RBP eCLIP14.09□□□□□ -0.15
LRRC49-227ENST00000561081 CABP2Q9NPB3 220 aa14.09□□□□□ -0.15
LRRC49-227ENST00000561081 MORC1Q86VD1 984 aa14.08□□□□□ -0.16
LRRC49-227ENST00000561081 CGNL1Q0VF96 1302 aa14.08□□□□□ -0.16
LRRC49-227ENST00000561081 ZNF521Q96K83 1311 aa14.08□□□□□ -0.16
LRRC49-227ENST00000561081 RIMS2Q9UQ26 1411 aa14.08□□□□□ -0.16
LRRC49-227ENST00000561081 PRAM1Q96QH2 718 aa14.07□□□□□ -0.16
LRRC49-227ENST00000561081 NINLQ9Y2I6 1382 aa14.07□□□□□ -0.16
LRRC49-227ENST00000561081 ZMYM3Q14202 1370 aa14.07□□□□□ -0.16
LRRC49-227ENST00000561081 SETD1AO15047 1707 aaKnown RBP14.06□□□□□ -0.16
LRRC49-227ENST00000561081 NSD2O96028 1365 aa14.05□□□□□ -0.16
LRRC49-227ENST00000561081 SHPRHQ149N8 1683 aa14.05□□□□□ -0.16
LRRC49-227ENST00000561081 ESF1Q9H501 851 aaKnown RBP14.05□□□□□ -0.16
LRRC49-227ENST00000561081 POGKQ9P215 609 aa14.05□□□□□ -0.16
LRRC49-227ENST00000561081 SRPK2P78362 688 aaKnown RBP14.04□□□□□ -0.16
LRRC49-227ENST00000561081 CCDC146Q8IYE0 955 aa14.04□□□□□ -0.16
LRRC49-227ENST00000561081 MINK1Q8N4C8 1332 aaPredicted RBP14.04□□□□□ -0.16
LRRC49-227ENST00000561081 DLC1Q96QB1 1528 aa14.04□□□□□ -0.16
LRRC49-227ENST00000561081 ATAD2Q6PL18 1390 aa14.04□□□□□ -0.16
LRRC49-227ENST00000561081 RBM19Q9Y4C8 960 aaKnown RBP14.04□□□□□ -0.16
LRRC49-227ENST00000561081 A0A1W2PP64 1363 aa14.03□□□□□ -0.16
LRRC49-227ENST00000561081 TNNT2P45379 298 aaPredicted RBP14.03□□□□□ -0.16
LRRC49-227ENST00000561081 NRXN3Q9Y4C0 1643 aa14.02□□□□□ -0.16
LRRC49-227ENST00000561081 GOLGA2Q08379 1002 aa14.02□□□□□ -0.16
LRRC49-227ENST00000561081 CCDC136Q96JN2 1154 aa14.02□□□□□ -0.16
LRRC49-227ENST00000561081 APAF1O14727 1248 aa14.02□□□□□ -0.17
LRRC49-227ENST00000561081 DUSP27Q5VZP5 1158 aa14.02□□□□□ -0.17
LRRC49-227ENST00000561081 ABCC11Q96J66 1382 aa14.02□□□□□ -0.17
LRRC49-227ENST00000561081 CD163L1Q9NR16 1453 aa14.01□□□□□ -0.17
LRRC49-227ENST00000561081 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.01□□□□□ -0.17
LRRC49-227ENST00000561081 NGEFQ8N5V2 710 aa14□□□□□ -0.17
LRRC49-227ENST00000561081 TNRQ92752 1358 aa14□□□□□ -0.17
LRRC49-227ENST00000561081 MTHFSP49914 203 aa13.99□□□□□ -0.17
LRRC49-227ENST00000561081 SLFN5Q08AF3 891 aa13.99□□□□□ -0.17
LRRC49-227ENST00000561081 TRMT2AQ8IZ69 625 aaKnown RBP13.99□□□□□ -0.17
LRRC49-227ENST00000561081 EXOC6Q8TAG9 804 aa13.99□□□□□ -0.17
LRRC49-227ENST00000561081 CDK19Q9BWU1 502 aa13.99□□□□□ -0.17
LRRC49-227ENST00000561081 TERF2IPQ9NYB0 399 aa13.99□□□□□ -0.17
LRRC49-227ENST00000561081 UBR1Q8IWV7 1749 aa13.97□□□□□ -0.17
LRRC49-227ENST00000561081 ANKRD26Q9UPS8 1709 aa13.97□□□□□ -0.17
LRRC49-227ENST00000561081 WAPLQ7Z5K2 1190 aa13.97□□□□□ -0.17
LRRC49-227ENST00000561081 CFAP53Q96M91 514 aa13.97□□□□□ -0.17
LRRC49-227ENST00000561081 MED14O60244 1454 aa13.97□□□□□ -0.17
LRRC49-227ENST00000561081 PLIN1O60240 522 aa13.96□□□□□ -0.17
LRRC49-227ENST00000561081 METP08581 1390 aa13.96□□□□□ -0.17
LRRC49-227ENST00000561081 NLRP1Q9C000 1473 aa13.96□□□□□ -0.17
LRRC49-227ENST00000561081 HDGFP51858 240 aaKnown RBP13.96□□□□□ -0.18
LRRC49-227ENST00000561081 SPINK5Q9NQ38 1064 aaPredicted RBP13.96□□□□□ -0.18
LRRC49-227ENST00000561081 IQSEC2Q5JU85 1478 aa13.95□□□□□ -0.18
LRRC49-227ENST00000561081 RUNDC1Q96C34 613 aa13.95□□□□□ -0.18
LRRC49-227ENST00000561081 KNDC1Q76NI1 1749 aa13.95□□□□□ -0.18
LRRC49-227ENST00000561081 TMEM2Q9UHN6 1383 aa13.95□□□□□ -0.18
LRRC49-227ENST00000561081 E9PSI1 815 aa13.94□□□□□ -0.18
LRRC49-227ENST00000561081 FYB1O15117 783 aa13.94□□□□□ -0.18
LRRC49-227ENST00000561081 HDGFL2Q7Z4V5 671 aaPredicted RBP13.94□□□□□ -0.18
LRRC49-227ENST00000561081 CABP1Q9NZU7 370 aa13.94□□□□□ -0.18
LRRC49-227ENST00000561081 GGNBP2Q9H3C7 697 aa13.94□□□□□ -0.18
LRRC49-227ENST00000561081 NKTRP30414 1462 aaKnown RBP13.94□□□□□ -0.18
LRRC49-227ENST00000561081 TECPR2O15040 1411 aa13.93□□□□□ -0.18
LRRC49-227ENST00000561081 KIF20BQ96Q89 1820 aa13.93□□□□□ -0.18
LRRC49-227ENST00000561081 WWC1Q8IX03 1113 aa13.93□□□□□ -0.18
LRRC49-227ENST00000561081 DMRT2Q9Y5R5 561 aa13.93□□□□□ -0.18
LRRC49-227ENST00000561081 ATP7BP35670 1465 aa13.92□□□□□ -0.18
LRRC49-227ENST00000561081 FAM135BQ49AJ0 1406 aa13.92□□□□□ -0.18
LRRC49-227ENST00000561081 SIRT1Q96EB6 747 aa13.92□□□□□ -0.18
LRRC49-227ENST00000561081 CPS1P31327 1500 aa13.91□□□□□ -0.18
LRRC49-227ENST00000561081 CRBNQ96SW2 442 aa13.91□□□□□ -0.18
LRRC49-227ENST00000561081 COL3A1P02461 1466 aaPredicted RBP13.91□□□□□ -0.18
LRRC49-227ENST00000561081 TCP11L2Q8N4U5 519 aa13.91□□□□□ -0.18
LRRC49-227ENST00000561081 PHF23Q9BUL5 403 aaPredicted RBP13.91□□□□□ -0.18
LRRC49-227ENST00000561081 WASLO00401 505 aaPredicted RBP13.9□□□□□ -0.18
LRRC49-227ENST00000561081 C20orf194Q5TEA3 1177 aa13.9□□□□□ -0.18
LRRC49-227ENST00000561081 TXNDC2Q86VQ3 553 aa13.9□□□□□ -0.18
LRRC49-227ENST00000561081 U2AF1L5P0DN76 240 aaPredicted RBP13.89□□□□□ -0.19
LRRC49-227ENST00000561081 U2AF1Q01081 240 aaKnown RBP eCLIP13.89□□□□□ -0.19
LRRC49-227ENST00000561081 NCBP3Q53F19 620 aaKnown RBP13.89□□□□□ -0.19
LRRC49-227ENST00000561081 ADAMTS13Q76LX8 1427 aa13.89□□□□□ -0.19
LRRC49-227ENST00000561081 ADGRB2O60241 1585 aa13.88□□□□□ -0.19
LRRC49-227ENST00000561081 CCDC27Q2M243 656 aa13.88□□□□□ -0.19
LRRC49-227ENST00000561081 RRP7AQ9Y3A4 280 aaKnown RBP13.88□□□□□ -0.19
LRRC49-227ENST00000561081 C3P01024 1663 aa13.88□□□□□ -0.19
LRRC49-227ENST00000561081 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.88□□□□□ -0.19
LRRC49-227ENST00000561081 CPSF1Q10570 1443 aaKnown RBP13.88□□□□□ -0.19
LRRC49-227ENST00000561081 PPIP5K1Q6PFW1 1433 aa13.88□□□□□ -0.19
LRRC49-227ENST00000561081 NEUROD2Q15784 382 aa13.87□□□□□ -0.19
LRRC49-227ENST00000561081 PLEKHG1Q9ULL1 1385 aa13.87□□□□□ -0.19
LRRC49-227ENST00000561081 CEBPAP49715 358 aaPredicted RBP13.87□□□□□ -0.19
LRRC49-227ENST00000561081 LTKP29376 864 aa13.87□□□□□ -0.19
LRRC49-227ENST00000561081 WDR63Q8IWG1 891 aa13.87□□□□□ -0.19
LRRC49-227ENST00000561081 PNPLA6Q8IY17 1366 aa13.86□□□□□ -0.19
LRRC49-227ENST00000561081 FANCIQ9NVI1 1328 aa13.86□□□□□ -0.19
LRRC49-227ENST00000561081 FER1L4A9Z1Z3 1794 aa13.86□□□□□ -0.19
LRRC49-227ENST00000561081 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.85□□□□□ -0.19
LRRC49-227ENST00000561081 ROBO2Q9HCK4 1378 aa13.85□□□□□ -0.19
LRRC49-227ENST00000561081 EDC4Q6P2E9 1401 aaKnown RBP13.85□□□□□ -0.19
LRRC49-227ENST00000561081 CDC42BPGQ6DT37 1551 aa13.85□□□□□ -0.19
LRRC49-227ENST00000561081 NUDT16Q96DE0 195 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms