RNA–Protein interactions for RNA: ENST00000561000.1

LINC01220-202, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 5

Gene LINC01220, Length 159 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-202ENST00000561000 LRPPRCP42704 1394 aaKnown RBP27.6■■■□□ 2.01
LINC01220-202ENST00000561000 RAB3GAP2Q9H2M9 1393 aa27.59■■■□□ 2.01
LINC01220-202ENST00000561000 NUTM2FA1L443 756 aa27.58■■■□□ 2.01
LINC01220-202ENST00000561000 SOS2Q07890 1332 aaPredicted RBP27.58■■■□□ 2.01
LINC01220-202ENST00000561000 ADAMTS2O95450 1211 aa27.57■■■□□ 2
LINC01220-202ENST00000561000 ABCC11Q96J66 1382 aa27.56■■■□□ 2
LINC01220-202ENST00000561000 PIK3C2GO75747 1445 aa27.55■■■□□ 2
LINC01220-202ENST00000561000 C14orf93Q9H972 538 aaKnown RBP27.54■■■□□ 2
LINC01220-202ENST00000561000 PLEKHH1Q9ULM0 1364 aa27.54■■■□□ 2
LINC01220-202ENST00000561000 CFAP70Q5T0N1 1121 aa27.53■■■□□ 2
LINC01220-202ENST00000561000 NGLY1Q96IV0 654 aa27.53■■■□□ 2
LINC01220-202ENST00000561000 TECPR2O15040 1411 aa27.52■■■□□ 2
LINC01220-202ENST00000561000 FOXO3O43524 673 aa27.52■■■□□ 2
LINC01220-202ENST00000561000 QTRT2Q9H974 415 aaKnown RBP27.52■■■□□ 2
LINC01220-202ENST00000561000 NPHP3Q7Z494 1330 aa27.51■■□□□ 1.99
LINC01220-202ENST00000561000 YTHDC2Q9H6S0 1430 aaKnown RBP27.5■■□□□ 1.99
LINC01220-202ENST00000561000 XPCQ01831 940 aaPredicted RBP27.5■■□□□ 1.99
LINC01220-202ENST00000561000 CDC42BPGQ6DT37 1551 aa27.48■■□□□ 1.99
LINC01220-202ENST00000561000 DHX57Q6P158 1386 aaKnown RBP27.48■■□□□ 1.99
LINC01220-202ENST00000561000 IFT172Q9UG01 1749 aa27.47■■□□□ 1.99
LINC01220-202ENST00000561000 SIRT1Q96EB6 747 aa27.47■■□□□ 1.99
LINC01220-202ENST00000561000 RBM6P78332 1123 aaKnown RBP27.44■■□□□ 1.98
LINC01220-202ENST00000561000 SAFB2Q14151 953 aaKnown RBP eCLIP27.44■■□□□ 1.98
LINC01220-202ENST00000561000 KDM2AQ9Y2K7 1162 aa27.44■■□□□ 1.98
LINC01220-202ENST00000561000 LAMC1P11047 1609 aa27.44■■□□□ 1.98
LINC01220-202ENST00000561000 UPF1Q92900 1129 aaKnown RBP eCLIP27.43■■□□□ 1.98
LINC01220-202ENST00000561000 MYOM2P54296 1465 aa27.41■■□□□ 1.98
LINC01220-202ENST00000561000 NRXN1Q9ULB1 1477 aa27.41■■□□□ 1.98
LINC01220-202ENST00000561000 PRAM1Q96QH2 718 aa27.41■■□□□ 1.98
LINC01220-202ENST00000561000 USP21Q9UK80 565 aa27.41■■□□□ 1.98
LINC01220-202ENST00000561000 POGKQ9P215 609 aa27.4■■□□□ 1.98
LINC01220-202ENST00000561000 DCAF11Q8TEB1 546 aa27.39■■□□□ 1.98
LINC01220-202ENST00000561000 PXDNQ92626 1479 aa27.38■■□□□ 1.97
LINC01220-202ENST00000561000 HRCP23327 699 aa27.38■■□□□ 1.97
LINC01220-202ENST00000561000 CDK12Q9NYV4 1490 aaPredicted RBP27.38■■□□□ 1.97
LINC01220-202ENST00000561000 KNDC1Q76NI1 1749 aa27.36■■□□□ 1.97
LINC01220-202ENST00000561000 KRT28Q7Z3Y7 464 aa27.36■■□□□ 1.97
LINC01220-202ENST00000561000 FNBP4Q8N3X1 1017 aaPredicted RBP27.36■■□□□ 1.97
LINC01220-202ENST00000561000 TRPC5Q9UL62 973 aaPredicted RBP27.35■■□□□ 1.97
LINC01220-202ENST00000561000 PHF8Q9UPP1 1060 aa27.34■■□□□ 1.97
LINC01220-202ENST00000561000 TRAK1Q9UPV9 953 aa27.34■■□□□ 1.97
LINC01220-202ENST00000561000 SPATA31A3Q5VYP0 1347 aa27.32■■□□□ 1.96
LINC01220-202ENST00000561000 RGS12O14924 1447 aa27.31■■□□□ 1.96
LINC01220-202ENST00000561000 PSME1Q06323 249 aa27.3■■□□□ 1.96
LINC01220-202ENST00000561000 HIRIP3Q9BW71 556 aaPredicted RBP27.29■■□□□ 1.96
LINC01220-202ENST00000561000 FMN2Q9NZ56 1722 aa27.28■■□□□ 1.96
LINC01220-202ENST00000561000 COL22A1Q8NFW1 1626 aaPredicted RBP27.28■■□□□ 1.96
LINC01220-202ENST00000561000 PLEKHG5O94827 1062 aa27.28■■□□□ 1.96
LINC01220-202ENST00000561000 PMFBP1Q8TBY8 1022 aa27.27■■□□□ 1.96
LINC01220-202ENST00000561000 STAC3Q96MF2 364 aa27.27■■□□□ 1.96
LINC01220-202ENST00000561000 MINK1Q8N4C8 1332 aaPredicted RBP27.26■■□□□ 1.95
LINC01220-202ENST00000561000 LMOD2Q6P5Q4 547 aa27.26■■□□□ 1.95
LINC01220-202ENST00000561000 HAP1P54257 671 aaPredicted RBP27.25■■□□□ 1.95
LINC01220-202ENST00000561000 DLC1Q96QB1 1528 aa27.24■■□□□ 1.95
LINC01220-202ENST00000561000 ATRNO75882 1429 aa27.23■■□□□ 1.95
LINC01220-202ENST00000561000 ADGRB1O14514 1584 aa27.22■■□□□ 1.95
LINC01220-202ENST00000561000 CABLES1Q8TDN4 633 aa27.22■■□□□ 1.95
LINC01220-202ENST00000561000 KIF1AQ12756 1690 aa27.21■■□□□ 1.95
LINC01220-202ENST00000561000 BCL9LQ86UU0 1499 aa27.21■■□□□ 1.95
LINC01220-202ENST00000561000 GJD4Q96KN9 370 aaPredicted RBP27.19■■□□□ 1.94
LINC01220-202ENST00000561000 TNS3Q68CZ2 1445 aa27.18■■□□□ 1.94
LINC01220-202ENST00000561000 UNC5CLQ8IV45 518 aa27.18■■□□□ 1.94
LINC01220-202ENST00000561000 ANKARQ7Z5J8 1434 aa27.17■■□□□ 1.94
LINC01220-202ENST00000561000 WASLO00401 505 aaPredicted RBP27.17■■□□□ 1.94
LINC01220-202ENST00000561000 SBNO1A3KN83 1393 aa27.17■■□□□ 1.94
LINC01220-202ENST00000561000 ATAD2Q6PL18 1390 aa27.15■■□□□ 1.94
LINC01220-202ENST00000561000 RGPD8O14715 1765 aaPredicted RBP27.14■■□□□ 1.93
LINC01220-202ENST00000561000 PRR36Q9H6K5 1346 aa27.14■■□□□ 1.93
LINC01220-202ENST00000561000 ARHGEF10O15013 1369 aa27.13■■□□□ 1.93
LINC01220-202ENST00000561000 EIF3AQ14152 1382 aaKnown RBP27.12■■□□□ 1.93
LINC01220-202ENST00000561000 GPRASP1Q5JY77 1395 aa27.11■■□□□ 1.93
LINC01220-202ENST00000561000 NGDNQ8NEJ9 315 aaKnown RBP27.11■■□□□ 1.93
LINC01220-202ENST00000561000 SLIT2O94813 1529 aa27.1■■□□□ 1.93
LINC01220-202ENST00000561000 ADGRB2O60241 1585 aa27.09■■□□□ 1.93
LINC01220-202ENST00000561000 USP32Q8NFA0 1604 aa27.08■■□□□ 1.93
LINC01220-202ENST00000561000 PAK3O75914 559 aaPredicted RBP27.07■■□□□ 1.92
LINC01220-202ENST00000561000 CCDC9Q9Y3X0 531 aaKnown RBP27.07■■□□□ 1.92
LINC01220-202ENST00000561000 FAM83GA6ND36 823 aa27.06■■□□□ 1.92
LINC01220-202ENST00000561000 NUDT16Q96DE0 195 aaKnown RBP27.06■■□□□ 1.92
LINC01220-202ENST00000561000 MARF1Q9Y4F3 1742 aaKnown RBP27.06■■□□□ 1.92
LINC01220-202ENST00000561000 TULP4Q9NRJ4 1543 aa27.06■■□□□ 1.92
LINC01220-202ENST00000561000 RALGAPBQ86X10 1494 aa27.05■■□□□ 1.92
LINC01220-202ENST00000561000 VPS72Q15906 364 aa27.04■■□□□ 1.92
LINC01220-202ENST00000561000 NBPF1Q3BBV0 1214 aa27.04■■□□□ 1.92
LINC01220-202ENST00000561000 CDK19Q9BWU1 502 aa27.04■■□□□ 1.92
LINC01220-202ENST00000561000 SEPT12Q8IYM1 358 aa27■■□□□ 1.91
LINC01220-202ENST00000561000 CCDC125Q86Z20 511 aa26.97■■□□□ 1.91
LINC01220-202ENST00000561000 BTG4Q9NY30 223 aa26.97■■□□□ 1.91
LINC01220-202ENST00000561000 GLI3P10071 1580 aa26.97■■□□□ 1.91
LINC01220-202ENST00000561000 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.96■■□□□ 1.91
LINC01220-202ENST00000561000 ATP7BP35670 1465 aa26.94■■□□□ 1.9
LINC01220-202ENST00000561000 ARHGEF28Q8N1W1 1705 aaKnown RBP26.94■■□□□ 1.9
LINC01220-202ENST00000561000 CCDC61Q9Y6R9 512 aa26.94■■□□□ 1.9
LINC01220-202ENST00000561000 A0A0G2JS52 829 aa26.93■■□□□ 1.9
LINC01220-202ENST00000561000 MYT1Q01538 1121 aa26.93■■□□□ 1.9
LINC01220-202ENST00000561000 L3MBTL2Q969R5 705 aa26.93■■□□□ 1.9
LINC01220-202ENST00000561000 TRPM3Q9HCF6 1732 aaPredicted RBP26.93■■□□□ 1.9
LINC01220-202ENST00000561000 ACEP12821 1306 aa26.92■■□□□ 1.9
LINC01220-202ENST00000561000 ONECUT3O60422 494 aaPredicted RBP26.92■■□□□ 1.9
LINC01220-202ENST00000561000 NBPF8Q3BBV2 869 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms