RNA–Protein interactions for RNA: ENST00000560845.1

CPNE6-218, Transcript of copine 6, humanhuman

TSL 5

Gene CPNE6, Length 580 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-218ENST00000560845 NALCNQ8IZF0 1738 aa11.49□□□□□ -0.57
CPNE6-218ENST00000560845 QTRT2Q9H974 415 aaKnown RBP11.49□□□□□ -0.57
CPNE6-218ENST00000560845 C1orf167Q5SNV9 1468 aa11.49□□□□□ -0.57
CPNE6-218ENST00000560845 PTCH1Q13635 1447 aa11.48□□□□□ -0.57
CPNE6-218ENST00000560845 SRCAPQ6ZRS2 3230 aa11.48□□□□□ -0.57
CPNE6-218ENST00000560845 ADAMTS2O95450 1211 aa11.47□□□□□ -0.57
CPNE6-218ENST00000560845 SPATA31E1Q6ZUB1 1445 aa11.46□□□□□ -0.57
CPNE6-218ENST00000560845 ROBO2Q9HCK4 1378 aa11.46□□□□□ -0.57
CPNE6-218ENST00000560845 ZNF316A6NFI3 1004 aaPredicted RBP11.46□□□□□ -0.57
CPNE6-218ENST00000560845 NGLY1Q96IV0 654 aa11.46□□□□□ -0.57
CPNE6-218ENST00000560845 LAMC1P11047 1609 aa11.46□□□□□ -0.58
CPNE6-218ENST00000560845 PRAG1Q86YV5 1406 aa11.45□□□□□ -0.58
CPNE6-218ENST00000560845 SOS2Q07890 1332 aaPredicted RBP11.45□□□□□ -0.58
CPNE6-218ENST00000560845 ATAD2Q6PL18 1390 aa11.44□□□□□ -0.58
CPNE6-218ENST00000560845 ORAI2Q96SN7 254 aa11.44□□□□□ -0.58
CPNE6-218ENST00000560845 DIEXFQ68CQ4 756 aaKnown RBP11.43□□□□□ -0.58
CPNE6-218ENST00000560845 USP21Q9UK80 565 aa11.43□□□□□ -0.58
CPNE6-218ENST00000560845 RALGAPBQ86X10 1494 aa11.43□□□□□ -0.58
CPNE6-218ENST00000560845 VGFO15240 615 aaPredicted RBP11.42□□□□□ -0.58
CPNE6-218ENST00000560845 TRPC5Q9UL62 973 aaPredicted RBP11.42□□□□□ -0.58
CPNE6-218ENST00000560845 ATRNO75882 1429 aa11.42□□□□□ -0.58
CPNE6-218ENST00000560845 MYOM2P54296 1465 aa11.41□□□□□ -0.58
CPNE6-218ENST00000560845 NBPF8Q3BBV2 869 aa11.41□□□□□ -0.58
CPNE6-218ENST00000560845 RGL3Q3MIN7 710 aa11.41□□□□□ -0.58
CPNE6-218ENST00000560845 FNBP4Q8N3X1 1017 aaPredicted RBP11.41□□□□□ -0.58
CPNE6-218ENST00000560845 KIF1BO60333 1816 aa11.4□□□□□ -0.58
CPNE6-218ENST00000560845 COL22A1Q8NFW1 1626 aaPredicted RBP11.4□□□□□ -0.58
CPNE6-218ENST00000560845 DCAF11Q8TEB1 546 aa11.4□□□□□ -0.58
CPNE6-218ENST00000560845 RPGRIP1LQ68CZ1 1315 aa11.39□□□□□ -0.59
CPNE6-218ENST00000560845 CDC42BPGQ6DT37 1551 aa11.39□□□□□ -0.59
CPNE6-218ENST00000560845 PXDNQ92626 1479 aa11.38□□□□□ -0.59
CPNE6-218ENST00000560845 NPHP3Q7Z494 1330 aa11.38□□□□□ -0.59
CPNE6-218ENST00000560845 EP400Q96L91 3159 aa11.38□□□□□ -0.59
CPNE6-218ENST00000560845 KDM2AQ9Y2K7 1162 aa11.38□□□□□ -0.59
CPNE6-218ENST00000560845 BCL9LQ86UU0 1499 aa11.38□□□□□ -0.59
CPNE6-218ENST00000560845 ESCO1Q5FWF5 840 aa11.37□□□□□ -0.59
CPNE6-218ENST00000560845 TRPM1Q7Z4N2 1603 aa11.37□□□□□ -0.59
CPNE6-218ENST00000560845 IFT172Q9UG01 1749 aa11.37□□□□□ -0.59
CPNE6-218ENST00000560845 STAC3Q96MF2 364 aa11.36□□□□□ -0.59
CPNE6-218ENST00000560845 ZRANB1Q9UGI0 708 aa11.36□□□□□ -0.59
CPNE6-218ENST00000560845 XPCQ01831 940 aaPredicted RBP11.35□□□□□ -0.59
CPNE6-218ENST00000560845 ROCK2O75116 1388 aaKnown RBP11.35□□□□□ -0.59
CPNE6-218ENST00000560845 PPLO60437 1756 aa11.34□□□□□ -0.59
CPNE6-218ENST00000560845 LRPPRCP42704 1394 aaKnown RBP11.34□□□□□ -0.59
CPNE6-218ENST00000560845 FOXO3O43524 673 aa11.34□□□□□ -0.59
CPNE6-218ENST00000560845 EIF4G2P78344 907 aaKnown RBP eCLIP11.34□□□□□ -0.59
CPNE6-218ENST00000560845 TECPR2O15040 1411 aa11.34□□□□□ -0.59
CPNE6-218ENST00000560845 NRXN1Q9ULB1 1477 aa11.33□□□□□ -0.6
CPNE6-218ENST00000560845 GPRASP1Q5JY77 1395 aa11.33□□□□□ -0.6
CPNE6-218ENST00000560845 USP47Q96K76 1375 aa11.33□□□□□ -0.6
CPNE6-218ENST00000560845 CCDC125Q86Z20 511 aa11.33□□□□□ -0.6
CPNE6-218ENST00000560845 GJD4Q96KN9 370 aaPredicted RBP11.33□□□□□ -0.6
CPNE6-218ENST00000560845 ADGRF5Q8IZF2 1346 aa11.33□□□□□ -0.6
CPNE6-218ENST00000560845 NUTM2FA1L443 756 aa11.32□□□□□ -0.6
CPNE6-218ENST00000560845 HSPA5P11021 654 aaKnown RBP11.32□□□□□ -0.6
CPNE6-218ENST00000560845 SLIT2O94813 1529 aa11.31□□□□□ -0.6
CPNE6-218ENST00000560845 WAPLQ7Z5K2 1190 aa11.31□□□□□ -0.6
CPNE6-218ENST00000560845 UNC5CLQ8IV45 518 aa11.31□□□□□ -0.6
CPNE6-218ENST00000560845 CARD11Q9BXL7 1154 aa11.31□□□□□ -0.6
CPNE6-218ENST00000560845 STK26Q9P289 416 aa11.31□□□□□ -0.6
CPNE6-218ENST00000560845 KIAA1210Q9ULL0 1709 aa11.31□□□□□ -0.6
CPNE6-218ENST00000560845 MARF1Q9Y4F3 1742 aaKnown RBP11.31□□□□□ -0.6
CPNE6-218ENST00000560845 ABCC11Q96J66 1382 aa11.3□□□□□ -0.6
CPNE6-218ENST00000560845 PLEKHH1Q9ULM0 1364 aa11.3□□□□□ -0.6
CPNE6-218ENST00000560845 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.3□□□□□ -0.6
CPNE6-218ENST00000560845 GLI3P10071 1580 aa11.3□□□□□ -0.6
CPNE6-218ENST00000560845 PIK3C2GO75747 1445 aa11.3□□□□□ -0.6
CPNE6-218ENST00000560845 BLMP54132 1417 aaPredicted RBP11.3□□□□□ -0.6
CPNE6-218ENST00000560845 SPATA31A3Q5VYP0 1347 aa11.3□□□□□ -0.6
CPNE6-218ENST00000560845 HIRIP3Q9BW71 556 aaPredicted RBP11.29□□□□□ -0.6
CPNE6-218ENST00000560845 USP32Q8NFA0 1604 aa11.28□□□□□ -0.6
CPNE6-218ENST00000560845 KIF1AQ12756 1690 aa11.28□□□□□ -0.6
CPNE6-218ENST00000560845 TMEM132EQ6IEE7 984 aa11.28□□□□□ -0.6
CPNE6-218ENST00000560845 KNDC1Q76NI1 1749 aa11.28□□□□□ -0.6
CPNE6-218ENST00000560845 TNS3Q68CZ2 1445 aa11.27□□□□□ -0.6
CPNE6-218ENST00000560845 YTHDC2Q9H6S0 1430 aaKnown RBP11.27□□□□□ -0.6
CPNE6-218ENST00000560845 FMN2Q9NZ56 1722 aa11.27□□□□□ -0.61
CPNE6-218ENST00000560845 NBPF1Q3BBV0 1214 aa11.27□□□□□ -0.61
CPNE6-218ENST00000560845 KRT28Q7Z3Y7 464 aa11.26□□□□□ -0.61
CPNE6-218ENST00000560845 HAP1P54257 671 aaPredicted RBP11.25□□□□□ -0.61
CPNE6-218ENST00000560845 DEFB132Q7Z7B7 95 aa11.25□□□□□ -0.61
CPNE6-218ENST00000560845 SEPT12Q8IYM1 358 aa11.25□□□□□ -0.61
CPNE6-218ENST00000560845 MIER1Q8N108 512 aa11.25□□□□□ -0.61
CPNE6-218ENST00000560845 SF3B2Q13435 895 aaKnown RBP11.24□□□□□ -0.61
CPNE6-218ENST00000560845 VPS72Q15906 364 aa11.24□□□□□ -0.61
CPNE6-218ENST00000560845 PHF8Q9UPP1 1060 aa11.24□□□□□ -0.61
CPNE6-218ENST00000560845 SBNO1A3KN83 1393 aa11.24□□□□□ -0.61
CPNE6-218ENST00000560845 EIF3AQ14152 1382 aaKnown RBP11.24□□□□□ -0.61
CPNE6-218ENST00000560845 PSME1Q06323 249 aa11.23□□□□□ -0.61
CPNE6-218ENST00000560845 CFAP70Q5T0N1 1121 aa11.23□□□□□ -0.61
CPNE6-218ENST00000560845 CABLES1Q8TDN4 633 aa11.23□□□□□ -0.61
CPNE6-218ENST00000560845 SIRT1Q96EB6 747 aa11.23□□□□□ -0.61
CPNE6-218ENST00000560845 ARHGEF10O15013 1369 aa11.23□□□□□ -0.61
CPNE6-218ENST00000560845 CCDC7Q96M83 1385 aa11.23□□□□□ -0.61
CPNE6-218ENST00000560845 ADGRB1O14514 1584 aa11.23□□□□□ -0.61
CPNE6-218ENST00000560845 PLEKHG5O94827 1062 aa11.22□□□□□ -0.61
CPNE6-218ENST00000560845 WASHC2AQ641Q2 1341 aa11.22□□□□□ -0.61
CPNE6-218ENST00000560845 CCDC9Q9Y3X0 531 aaKnown RBP11.22□□□□□ -0.61
CPNE6-218ENST00000560845 BRWD3Q6RI45 1802 aa11.21□□□□□ -0.61
CPNE6-218ENST00000560845 PLCH1Q4KWH8 1693 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms