RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 ARHGEF28Q8N1W1 1705 aaKnown RBP10.15□□□□□ -0.78
CTDSPL2-210ENST00000560834 SPDYE4A6NLX3 237 aa10.14□□□□□ -0.79
CTDSPL2-210ENST00000560834 ANKLE2Q86XL3 938 aa10.14□□□□□ -0.79
CTDSPL2-210ENST00000560834 TIMELESSQ9UNS1 1208 aa10.14□□□□□ -0.79
CTDSPL2-210ENST00000560834 EID1Q9Y6B2 187 aa10.14□□□□□ -0.79
CTDSPL2-210ENST00000560834 CPS1P31327 1500 aa10.13□□□□□ -0.79
CTDSPL2-210ENST00000560834 VGFO15240 615 aaPredicted RBP10.13□□□□□ -0.79
CTDSPL2-210ENST00000560834 PPP1R15AO75807 674 aaPredicted RBP10.13□□□□□ -0.79
CTDSPL2-210ENST00000560834 STAC3Q96MF2 364 aa10.13□□□□□ -0.79
CTDSPL2-210ENST00000560834 NBPF8Q3BBV2 869 aa10.12□□□□□ -0.79
CTDSPL2-210ENST00000560834 KDM2AQ9Y2K7 1162 aa10.12□□□□□ -0.79
CTDSPL2-210ENST00000560834 PTPRUQ92729 1446 aa10.11□□□□□ -0.79
CTDSPL2-210ENST00000560834 HDGFP51858 240 aaKnown RBP10.11□□□□□ -0.79
CTDSPL2-210ENST00000560834 METP08581 1390 aa10.11□□□□□ -0.79
CTDSPL2-210ENST00000560834 GPRASP1Q5JY77 1395 aa10.11□□□□□ -0.79
CTDSPL2-210ENST00000560834 TECPR2O15040 1411 aa10.1□□□□□ -0.79
CTDSPL2-210ENST00000560834 FBXO3Q9UK99 471 aa10.1□□□□□ -0.79
CTDSPL2-210ENST00000560834 DLC1Q96QB1 1528 aa10.1□□□□□ -0.79
CTDSPL2-210ENST00000560834 NKTRP30414 1462 aaKnown RBP10.1□□□□□ -0.79
CTDSPL2-210ENST00000560834 XIRP1Q702N8 1843 aaKnown RBP10.1□□□□□ -0.79
CTDSPL2-210ENST00000560834 CFAP70Q5T0N1 1121 aa10.09□□□□□ -0.79
CTDSPL2-210ENST00000560834 PROM2Q8N271 834 aa10.09□□□□□ -0.79
CTDSPL2-210ENST00000560834 PIK3R4Q99570 1358 aa10.09□□□□□ -0.79
CTDSPL2-210ENST00000560834 QRICH2Q9H0J4 1663 aa10.09□□□□□ -0.79
CTDSPL2-210ENST00000560834 PTCH1Q13635 1447 aa10.08□□□□□ -0.8
CTDSPL2-210ENST00000560834 YTHDC2Q9H6S0 1430 aaKnown RBP10.08□□□□□ -0.8
CTDSPL2-210ENST00000560834 LTBP4Q8N2S1 1624 aa10.08□□□□□ -0.8
CTDSPL2-210ENST00000560834 NALCNQ8IZF0 1738 aa10.08□□□□□ -0.8
CTDSPL2-210ENST00000560834 OTUD5Q96G74 571 aa10.08□□□□□ -0.8
CTDSPL2-210ENST00000560834 SLC26A8Q96RN1 970 aa10.08□□□□□ -0.8
CTDSPL2-210ENST00000560834 C14orf93Q9H972 538 aaKnown RBP10.08□□□□□ -0.8
CTDSPL2-210ENST00000560834 ROCK2O75116 1388 aaKnown RBP10.07□□□□□ -0.8
CTDSPL2-210ENST00000560834 LRPPRCP42704 1394 aaKnown RBP10.07□□□□□ -0.8
CTDSPL2-210ENST00000560834 TBX22Q9Y458 520 aa10.07□□□□□ -0.8
CTDSPL2-210ENST00000560834 NBPF1Q3BBV0 1214 aa10.06□□□□□ -0.8
CTDSPL2-210ENST00000560834 ADGRB2O60241 1585 aa10.05□□□□□ -0.8
CTDSPL2-210ENST00000560834 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.05□□□□□ -0.8
CTDSPL2-210ENST00000560834 CLCN6P51797 869 aa10.05□□□□□ -0.8
CTDSPL2-210ENST00000560834 BCANQ96GW7 911 aa10.05□□□□□ -0.8
CTDSPL2-210ENST00000560834 DCBLD2Q96PD2 775 aa10.05□□□□□ -0.8
CTDSPL2-210ENST00000560834 ABCC11Q96J66 1382 aa10.04□□□□□ -0.8
CTDSPL2-210ENST00000560834 ROBO2Q9HCK4 1378 aa10.04□□□□□ -0.8
CTDSPL2-210ENST00000560834 TMEM132EQ6IEE7 984 aa10.04□□□□□ -0.8
CTDSPL2-210ENST00000560834 ZNF335Q9H4Z2 1342 aaPredicted RBP10.04□□□□□ -0.8
CTDSPL2-210ENST00000560834 LRRC7Q96NW7 1537 aa10.03□□□□□ -0.8
CTDSPL2-210ENST00000560834 FAM135BQ49AJ0 1406 aa10.03□□□□□ -0.8
CTDSPL2-210ENST00000560834 CDC42BPGQ6DT37 1551 aa10.02□□□□□ -0.81
CTDSPL2-210ENST00000560834 ZEB1P37275 1124 aaPredicted RBP10.02□□□□□ -0.81
CTDSPL2-210ENST00000560834 USP47Q96K76 1375 aa10.01□□□□□ -0.81
CTDSPL2-210ENST00000560834 PLEKHH1Q9ULM0 1364 aa10.01□□□□□ -0.81
CTDSPL2-210ENST00000560834 KCNA6P17658 529 aa10.01□□□□□ -0.81
CTDSPL2-210ENST00000560834 CLEC11AQ9Y240 323 aa10.01□□□□□ -0.81
CTDSPL2-210ENST00000560834 AMOTL2Q9Y2J4 779 aa10.01□□□□□ -0.81
CTDSPL2-210ENST00000560834 FMN2Q9NZ56 1722 aa10.01□□□□□ -0.81
CTDSPL2-210ENST00000560834 TULP4Q9NRJ4 1543 aa10.01□□□□□ -0.81
CTDSPL2-210ENST00000560834 CARD11Q9BXL7 1154 aa10□□□□□ -0.81
CTDSPL2-210ENST00000560834 EIF3AQ14152 1382 aaKnown RBP10□□□□□ -0.81
CTDSPL2-210ENST00000560834 ADGRL3Q9HAR2 1447 aa9.99□□□□□ -0.81
CTDSPL2-210ENST00000560834 STK26Q9P289 416 aa9.99□□□□□ -0.81
CTDSPL2-210ENST00000560834 TRAK1Q9UPV9 953 aa9.99□□□□□ -0.81
CTDSPL2-210ENST00000560834 USP32Q8NFA0 1604 aa9.99□□□□□ -0.81
CTDSPL2-210ENST00000560834 TOPAZ1Q8N9V7 1692 aa9.99□□□□□ -0.81
CTDSPL2-210ENST00000560834 SBNO2Q9Y2G9 1366 aa9.99□□□□□ -0.81
CTDSPL2-210ENST00000560834 SPDYE1Q8NFV5 336 aaPredicted RBP9.98□□□□□ -0.81
CTDSPL2-210ENST00000560834 TMEM94Q12767 1356 aa9.98□□□□□ -0.81
CTDSPL2-210ENST00000560834 MYOM1P52179 1685 aa9.97□□□□□ -0.81
CTDSPL2-210ENST00000560834 SIRT1Q96EB6 747 aa9.97□□□□□ -0.81
CTDSPL2-210ENST00000560834 NCOA3Q9Y6Q9 1424 aa9.97□□□□□ -0.81
CTDSPL2-210ENST00000560834 IQSEC2Q5JU85 1478 aa9.97□□□□□ -0.81
CTDSPL2-210ENST00000560834 PRAM1Q96QH2 718 aa9.96□□□□□ -0.82
CTDSPL2-210ENST00000560834 CENPJQ9HC77 1338 aaPredicted RBP9.96□□□□□ -0.82
CTDSPL2-210ENST00000560834 DCCP43146 1447 aa9.96□□□□□ -0.82
CTDSPL2-210ENST00000560834 ITSN1Q15811 1721 aa9.96□□□□□ -0.82
CTDSPL2-210ENST00000560834 VASPP50552 380 aaPredicted RBP9.95□□□□□ -0.82
CTDSPL2-210ENST00000560834 WAPLQ7Z5K2 1190 aa9.95□□□□□ -0.82
CTDSPL2-210ENST00000560834 RGPD8O14715 1765 aaPredicted RBP9.94□□□□□ -0.82
CTDSPL2-210ENST00000560834 ATP7BP35670 1465 aa9.94□□□□□ -0.82
CTDSPL2-210ENST00000560834 RBM33Q96EV2 1170 aaKnown RBP9.94□□□□□ -0.82
CTDSPL2-210ENST00000560834 TESK2Q96S53 571 aa9.94□□□□□ -0.82
CTDSPL2-210ENST00000560834 ST20-MTHFSA0A0A6YYL1 179 aa9.93□□□□□ -0.82
CTDSPL2-210ENST00000560834 HSPA5P11021 654 aaKnown RBP9.93□□□□□ -0.82
CTDSPL2-210ENST00000560834 EIF4G2P78344 907 aaKnown RBP eCLIP9.93□□□□□ -0.82
CTDSPL2-210ENST00000560834 MST1RQ04912 1400 aa9.92□□□□□ -0.82
CTDSPL2-210ENST00000560834 DISP3Q9P2K9 1392 aa9.92□□□□□ -0.82
CTDSPL2-210ENST00000560834 SAFB2Q14151 953 aaKnown RBP eCLIP9.92□□□□□ -0.82
CTDSPL2-210ENST00000560834 PROSER2Q86WR7 435 aaPredicted RBP9.92□□□□□ -0.82
CTDSPL2-210ENST00000560834 MINK1Q8N4C8 1332 aaPredicted RBP9.91□□□□□ -0.82
CTDSPL2-210ENST00000560834 KIF1AQ12756 1690 aa9.91□□□□□ -0.82
CTDSPL2-210ENST00000560834 POGKQ9P215 609 aa9.91□□□□□ -0.82
CTDSPL2-210ENST00000560834 ANKARQ7Z5J8 1434 aa9.9□□□□□ -0.82
CTDSPL2-210ENST00000560834 MSH6P52701 1360 aa9.9□□□□□ -0.82
CTDSPL2-210ENST00000560834 HIRIP3Q9BW71 556 aaPredicted RBP9.9□□□□□ -0.82
CTDSPL2-210ENST00000560834 AKAP12Q02952 1782 aa9.9□□□□□ -0.82
CTDSPL2-210ENST00000560834 NHSL1Q5SYE7 1610 aa9.89□□□□□ -0.83
CTDSPL2-210ENST00000560834 NRKQ7Z2Y5 1582 aa9.89□□□□□ -0.83
CTDSPL2-210ENST00000560834 ROBO1Q9Y6N7 1651 aa9.89□□□□□ -0.83
CTDSPL2-210ENST00000560834 PRR36Q9H6K5 1346 aa9.88□□□□□ -0.83
CTDSPL2-210ENST00000560834 MON2Q7Z3U7 1717 aa9.88□□□□□ -0.83
CTDSPL2-210ENST00000560834 C1orf167Q5SNV9 1468 aa9.88□□□□□ -0.83
CTDSPL2-210ENST00000560834 CD44P16070 742 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms