RNA–Protein interactions for RNA: ENST00000560814.1

NDUFA3P4-201, Transcript of NADH:ubiquinone oxidoreductase subunit A3 pseudogene 4, humanhuman

BASIC

Gene NDUFA3P4, Length 250 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3P4-201ENST00000560814 USP32Q8NFA0 1604 aa10.35□□□□□ -0.75
NDUFA3P4-201ENST00000560814 MSH6P52701 1360 aa10.35□□□□□ -0.75
NDUFA3P4-201ENST00000560814 TOPAZ1Q8N9V7 1692 aa10.34□□□□□ -0.75
NDUFA3P4-201ENST00000560814 WAPLQ7Z5K2 1190 aa10.34□□□□□ -0.75
NDUFA3P4-201ENST00000560814 PIAS4Q8N2W9 510 aaPredicted RBP10.34□□□□□ -0.75
NDUFA3P4-201ENST00000560814 PRAM1Q96QH2 718 aa10.34□□□□□ -0.75
NDUFA3P4-201ENST00000560814 ROBO1Q9Y6N7 1651 aa10.34□□□□□ -0.75
NDUFA3P4-201ENST00000560814 EIF3AQ14152 1382 aaKnown RBP10.33□□□□□ -0.76
NDUFA3P4-201ENST00000560814 RGPD8O14715 1765 aaPredicted RBP10.33□□□□□ -0.76
NDUFA3P4-201ENST00000560814 ITSN1Q15811 1721 aa10.33□□□□□ -0.76
NDUFA3P4-201ENST00000560814 MST1RQ04912 1400 aa10.33□□□□□ -0.76
NDUFA3P4-201ENST00000560814 USP47Q96K76 1375 aa10.32□□□□□ -0.76
NDUFA3P4-201ENST00000560814 SAFB2Q14151 953 aaKnown RBP eCLIP10.32□□□□□ -0.76
NDUFA3P4-201ENST00000560814 C14orf37Q86TY3 774 aa10.32□□□□□ -0.76
NDUFA3P4-201ENST00000560814 CARD11Q9BXL7 1154 aa10.32□□□□□ -0.76
NDUFA3P4-201ENST00000560814 SIRT1Q96EB6 747 aa10.31□□□□□ -0.76
NDUFA3P4-201ENST00000560814 KIF1AQ12756 1690 aa10.31□□□□□ -0.76
NDUFA3P4-201ENST00000560814 CENPJQ9HC77 1338 aaPredicted RBP10.31□□□□□ -0.76
NDUFA3P4-201ENST00000560814 ATP7BP35670 1465 aa10.3□□□□□ -0.76
NDUFA3P4-201ENST00000560814 NHSL1Q5SYE7 1610 aa10.3□□□□□ -0.76
NDUFA3P4-201ENST00000560814 POGKQ9P215 609 aa10.3□□□□□ -0.76
NDUFA3P4-201ENST00000560814 MINK1Q8N4C8 1332 aaPredicted RBP10.3□□□□□ -0.76
NDUFA3P4-201ENST00000560814 SBNO2Q9Y2G9 1366 aa10.29□□□□□ -0.76
NDUFA3P4-201ENST00000560814 UBAP1LF5GYI3 381 aa10.29□□□□□ -0.76
NDUFA3P4-201ENST00000560814 C1orf167Q5SNV9 1468 aa10.29□□□□□ -0.76
NDUFA3P4-201ENST00000560814 ANKARQ7Z5J8 1434 aa10.28□□□□□ -0.76
NDUFA3P4-201ENST00000560814 HIRIP3Q9BW71 556 aaPredicted RBP10.28□□□□□ -0.76
NDUFA3P4-201ENST00000560814 C19orf44Q9H6X5 657 aa10.28□□□□□ -0.76
NDUFA3P4-201ENST00000560814 AHDC1Q5TGY3 1603 aaPredicted RBP10.28□□□□□ -0.76
NDUFA3P4-201ENST00000560814 MYOM1P52179 1685 aa10.27□□□□□ -0.77
NDUFA3P4-201ENST00000560814 PHLPP1O60346 1717 aa10.27□□□□□ -0.77
NDUFA3P4-201ENST00000560814 COL16A1Q07092 1604 aaPredicted RBP10.26□□□□□ -0.77
NDUFA3P4-201ENST00000560814 ATF3P18847 181 aa10.26□□□□□ -0.77
NDUFA3P4-201ENST00000560814 CADPS2Q86UW7 1296 aa10.26□□□□□ -0.77
NDUFA3P4-201ENST00000560814 PRR36Q9H6K5 1346 aa10.25□□□□□ -0.77
NDUFA3P4-201ENST00000560814 DISP3Q9P2K9 1392 aa10.25□□□□□ -0.77
NDUFA3P4-201ENST00000560814 TOM1O60784 492 aa10.24□□□□□ -0.77
NDUFA3P4-201ENST00000560814 PIP4K2BP78356 416 aa10.24□□□□□ -0.77
NDUFA3P4-201ENST00000560814 TESK2Q96S53 571 aa10.24□□□□□ -0.77
NDUFA3P4-201ENST00000560814 AKAP12Q02952 1782 aa10.24□□□□□ -0.77
NDUFA3P4-201ENST00000560814 NRKQ7Z2Y5 1582 aa10.23□□□□□ -0.77
NDUFA3P4-201ENST00000560814 ST20-MTHFSA0A0A6YYL1 179 aa10.23□□□□□ -0.77
NDUFA3P4-201ENST00000560814 NUTM2FA1L443 756 aa10.23□□□□□ -0.77
NDUFA3P4-201ENST00000560814 WASLO00401 505 aaPredicted RBP10.23□□□□□ -0.77
NDUFA3P4-201ENST00000560814 FBXO41Q8TF61 875 aa10.23□□□□□ -0.77
NDUFA3P4-201ENST00000560814 SLAIN2Q9P270 581 aa10.23□□□□□ -0.77
NDUFA3P4-201ENST00000560814 MON2Q7Z3U7 1717 aa10.23□□□□□ -0.77
NDUFA3P4-201ENST00000560814 TRPM3Q9HCF6 1732 aaPredicted RBP10.23□□□□□ -0.77
NDUFA3P4-201ENST00000560814 SCAF1Q9H7N4 1312 aaKnown RBP10.23□□□□□ -0.77
NDUFA3P4-201ENST00000560814 BRINP3Q76B58 766 aa10.22□□□□□ -0.77
NDUFA3P4-201ENST00000560814 PXDNQ92626 1479 aa10.22□□□□□ -0.77
NDUFA3P4-201ENST00000560814 HSPA5P11021 654 aaKnown RBP10.21□□□□□ -0.77
NDUFA3P4-201ENST00000560814 ORAI2Q96SN7 254 aa10.21□□□□□ -0.77
NDUFA3P4-201ENST00000560814 EIF4G2P78344 907 aaKnown RBP eCLIP10.2□□□□□ -0.78
NDUFA3P4-201ENST00000560814 SHPRHQ149N8 1683 aa10.2□□□□□ -0.78
NDUFA3P4-201ENST00000560814 PPIP5K1Q6PFW1 1433 aa10.2□□□□□ -0.78
NDUFA3P4-201ENST00000560814 EVC2Q86UK5 1308 aa10.2□□□□□ -0.78
NDUFA3P4-201ENST00000560814 ABCA3Q99758 1704 aa10.2□□□□□ -0.78
NDUFA3P4-201ENST00000560814 CDK19Q9BWU1 502 aa10.2□□□□□ -0.78
NDUFA3P4-201ENST00000560814 ALS2Q96Q42 1657 aa10.19□□□□□ -0.78
NDUFA3P4-201ENST00000560814 SRPK2P78362 688 aaKnown RBP10.19□□□□□ -0.78
NDUFA3P4-201ENST00000560814 CABP2Q9NPB3 220 aa10.19□□□□□ -0.78
NDUFA3P4-201ENST00000560814 CD163L1Q9NR16 1453 aa10.18□□□□□ -0.78
NDUFA3P4-201ENST00000560814 ATAD2Q6PL18 1390 aa10.18□□□□□ -0.78
NDUFA3P4-201ENST00000560814 ESCO1Q5FWF5 840 aa10.18□□□□□ -0.78
NDUFA3P4-201ENST00000560814 NUDT16Q96DE0 195 aaKnown RBP10.18□□□□□ -0.78
NDUFA3P4-201ENST00000560814 CRYBG1Q9Y4K1 1723 aa10.18□□□□□ -0.78
NDUFA3P4-201ENST00000560814 COL22A1Q8NFW1 1626 aaPredicted RBP10.18□□□□□ -0.78
NDUFA3P4-201ENST00000560814 POLR3AO14802 1390 aaPredicted RBP10.17□□□□□ -0.78
NDUFA3P4-201ENST00000560814 MARF1Q9Y4F3 1742 aaKnown RBP10.17□□□□□ -0.78
NDUFA3P4-201ENST00000560814 MSH5O43196 834 aa10.17□□□□□ -0.78
NDUFA3P4-201ENST00000560814 ZEB1P37275 1124 aaPredicted RBP10.17□□□□□ -0.78
NDUFA3P4-201ENST00000560814 DDX17Q92841 729 aaKnown RBP10.17□□□□□ -0.78
NDUFA3P4-201ENST00000560814 PIK3C2AO00443 1686 aa10.17□□□□□ -0.78
NDUFA3P4-201ENST00000560814 HSPA1LP34931 641 aa10.16□□□□□ -0.78
NDUFA3P4-201ENST00000560814 PHF8Q9UPP1 1060 aa10.16□□□□□ -0.78
NDUFA3P4-201ENST00000560814 MED1Q15648 1581 aaPredicted RBP10.16□□□□□ -0.78
NDUFA3P4-201ENST00000560814 PHRF1Q9P1Y6 1649 aaKnown RBP10.15□□□□□ -0.78
NDUFA3P4-201ENST00000560814 TMF1P82094 1093 aa10.15□□□□□ -0.78
NDUFA3P4-201ENST00000560814 XPCQ01831 940 aaPredicted RBP10.15□□□□□ -0.78
NDUFA3P4-201ENST00000560814 ILDR1Q86SU0 546 aaPredicted RBP10.15□□□□□ -0.78
NDUFA3P4-201ENST00000560814 PMFBP1Q8TBY8 1022 aa10.15□□□□□ -0.78
NDUFA3P4-201ENST00000560814 USP54Q70EL1 1684 aa10.15□□□□□ -0.79
NDUFA3P4-201ENST00000560814 USP6P35125 1406 aa10.15□□□□□ -0.79
NDUFA3P4-201ENST00000560814 TNS3Q68CZ2 1445 aa10.15□□□□□ -0.79
NDUFA3P4-201ENST00000560814 NINLQ9Y2I6 1382 aa10.14□□□□□ -0.79
NDUFA3P4-201ENST00000560814 KIF20BQ96Q89 1820 aa10.14□□□□□ -0.79
NDUFA3P4-201ENST00000560814 SOS2Q07890 1332 aaPredicted RBP10.14□□□□□ -0.79
NDUFA3P4-201ENST00000560814 NPHP3Q7Z494 1330 aa10.14□□□□□ -0.79
NDUFA3P4-201ENST00000560814 CCDC61Q9Y6R9 512 aa10.14□□□□□ -0.79
NDUFA3P4-201ENST00000560814 CPSF1Q10570 1443 aaKnown RBP10.14□□□□□ -0.79
NDUFA3P4-201ENST00000560814 A0A1W2PP64 1363 aa10.14□□□□□ -0.79
NDUFA3P4-201ENST00000560814 FOXO3O43524 673 aa10.13□□□□□ -0.79
NDUFA3P4-201ENST00000560814 PNPLA6Q8IY17 1366 aa10.13□□□□□ -0.79
NDUFA3P4-201ENST00000560814 ACEP12821 1306 aa10.12□□□□□ -0.79
NDUFA3P4-201ENST00000560814 KIF7Q2M1P5 1343 aa10.12□□□□□ -0.79
NDUFA3P4-201ENST00000560814 LRP6O75581 1613 aa10.12□□□□□ -0.79
NDUFA3P4-201ENST00000560814 PLEKHG3A1L390 1219 aa10.12□□□□□ -0.79
NDUFA3P4-201ENST00000560814 C11orf95C9JLR9 678 aaPredicted RBP10.12□□□□□ -0.79
NDUFA3P4-201ENST00000560814 CABP1Q9NZU7 370 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms