RNA–Protein interactions for RNA: ENST00000560801.5

TRPM1-212, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best)

Gene TRPM1, Length 4,454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-212ENST00000560801 CABP4P57796 275 aa12.44□□□□□ -0.42
TRPM1-212ENST00000560801 TMEM94Q12767 1356 aa12.44□□□□□ -0.42
TRPM1-212ENST00000560801 FRAT2O75474 233 aaPredicted RBP12.43□□□□□ -0.42
TRPM1-212ENST00000560801 RALBP1Q15311 655 aa12.43□□□□□ -0.42
TRPM1-212ENST00000560801 TMEM2Q9UHN6 1383 aa12.43□□□□□ -0.42
TRPM1-212ENST00000560801 LTKP29376 864 aa12.43□□□□□ -0.42
TRPM1-212ENST00000560801 ZCCHC11Q5TAX3 1644 aaKnown RBP12.43□□□□□ -0.42
TRPM1-212ENST00000560801 ITSN2Q9NZM3 1697 aa12.43□□□□□ -0.42
TRPM1-212ENST00000560801 BAG6P46379 1132 aa12.43□□□□□ -0.42
TRPM1-212ENST00000560801 C14orf93Q9H972 538 aaKnown RBP12.42□□□□□ -0.42
TRPM1-212ENST00000560801 MAP3K1Q13233 1512 aa12.42□□□□□ -0.42
TRPM1-212ENST00000560801 HSP90AB1P08238 724 aaKnown RBP12.42□□□□□ -0.42
TRPM1-212ENST00000560801 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.42□□□□□ -0.42
TRPM1-212ENST00000560801 EIF2S2P20042 333 aaKnown RBP12.41□□□□□ -0.42
TRPM1-212ENST00000560801 FRAT1Q92837 279 aaPredicted RBP12.41□□□□□ -0.42
TRPM1-212ENST00000560801 ZNF530Q6P9A1 599 aaPredicted RBP12.41□□□□□ -0.42
TRPM1-212ENST00000560801 HMOX1P09601 288 aa12.41□□□□□ -0.42
TRPM1-212ENST00000560801 QTRT2Q9H974 415 aaKnown RBP12.41□□□□□ -0.42
TRPM1-212ENST00000560801 DDB1Q16531 1140 aa12.4□□□□□ -0.42
TRPM1-212ENST00000560801 NAIPQ13075 1403 aa12.4□□□□□ -0.42
TRPM1-212ENST00000560801 KDM4FA0A1W2PPD8 638 aa12.4□□□□□ -0.42
TRPM1-212ENST00000560801 ORAI2Q96SN7 254 aa12.39□□□□□ -0.43
TRPM1-212ENST00000560801 HDAC5Q9UQL6 1122 aa12.39□□□□□ -0.43
TRPM1-212ENST00000560801 CHMP4BQ9H444 224 aaKnown RBP12.39□□□□□ -0.43
TRPM1-212ENST00000560801 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.39□□□□□ -0.43
TRPM1-212ENST00000560801 MLH3Q9UHC1 1453 aa12.38□□□□□ -0.43
TRPM1-212ENST00000560801 BTG4Q9NY30 223 aa12.38□□□□□ -0.43
TRPM1-212ENST00000560801 TRPC5Q9UL62 973 aaPredicted RBP12.38□□□□□ -0.43
TRPM1-212ENST00000560801 ACEP12821 1306 aa12.38□□□□□ -0.43
TRPM1-212ENST00000560801 MTHFSP49914 203 aa12.38□□□□□ -0.43
TRPM1-212ENST00000560801 NEXNQ0ZGT2 675 aa12.37□□□□□ -0.43
TRPM1-212ENST00000560801 GORABQ5T7V8 394 aa12.37□□□□□ -0.43
TRPM1-212ENST00000560801 FBXO41Q8TF61 875 aa12.37□□□□□ -0.43
TRPM1-212ENST00000560801 FAM177BA6PVY3 158 aa12.37□□□□□ -0.43
TRPM1-212ENST00000560801 TMOD3Q9NYL9 352 aa12.37□□□□□ -0.43
TRPM1-212ENST00000560801 POLD1P28340 1107 aa12.37□□□□□ -0.43
TRPM1-212ENST00000560801 GAS2L2Q8NHY3 880 aa12.37□□□□□ -0.43
TRPM1-212ENST00000560801 RRS1Q15050 365 aaKnown RBP12.36□□□□□ -0.43
TRPM1-212ENST00000560801 ISY1Q9ULR0 285 aaKnown RBP12.36□□□□□ -0.43
TRPM1-212ENST00000560801 MPRIPQ6WCQ1 1025 aa12.36□□□□□ -0.43
TRPM1-212ENST00000560801 MS4A1P11836 297 aa12.35□□□□□ -0.43
TRPM1-212ENST00000560801 CCDC146Q8IYE0 955 aa12.35□□□□□ -0.43
TRPM1-212ENST00000560801 AK7Q96M32 723 aa12.35□□□□□ -0.43
TRPM1-212ENST00000560801 RRP7AQ9Y3A4 280 aaKnown RBP12.35□□□□□ -0.43
TRPM1-212ENST00000560801 DDX17Q92841 729 aaKnown RBP12.34□□□□□ -0.43
TRPM1-212ENST00000560801 SLC4A10Q6U841 1118 aa12.34□□□□□ -0.43
TRPM1-212ENST00000560801 FBXW7Q969H0 707 aa12.34□□□□□ -0.43
TRPM1-212ENST00000560801 KCNJ4P48050 445 aa12.33□□□□□ -0.43
TRPM1-212ENST00000560801 FAM98CQ17RN3 349 aaKnown RBP12.33□□□□□ -0.43
TRPM1-212ENST00000560801 SULT6B1Q6IMI4 303 aa12.33□□□□□ -0.43
TRPM1-212ENST00000560801 PTPRKQ15262 1439 aa12.33□□□□□ -0.44
TRPM1-212ENST00000560801 ADCY10Q96PN6 1610 aa12.33□□□□□ -0.44
TRPM1-212ENST00000560801 ELL2O00472 640 aaPredicted RBP12.33□□□□□ -0.44
TRPM1-212ENST00000560801 DDX58O95786 925 aaKnown RBP12.33□□□□□ -0.44
TRPM1-212ENST00000560801 UGGT1Q9NYU2 1555 aa12.33□□□□□ -0.44
TRPM1-212ENST00000560801 NME9Q86XW9 330 aa12.33□□□□□ -0.44
TRPM1-212ENST00000560801 STK32BQ9NY57 414 aa12.33□□□□□ -0.44
TRPM1-212ENST00000560801 ZPR1O75312 459 aa12.32□□□□□ -0.44
TRPM1-212ENST00000560801 HSPA1LP34931 641 aa12.32□□□□□ -0.44
TRPM1-212ENST00000560801 NECTIN2Q92692 538 aa12.32□□□□□ -0.44
TRPM1-212ENST00000560801 PTPRMP28827 1452 aa12.32□□□□□ -0.44
TRPM1-212ENST00000560801 SAMD9Q5K651 1589 aa12.32□□□□□ -0.44
TRPM1-212ENST00000560801 NLRP1Q9C000 1473 aa12.31□□□□□ -0.44
TRPM1-212ENST00000560801 IPO8O15397 1037 aaKnown RBP12.31□□□□□ -0.44
TRPM1-212ENST00000560801 KIF6Q6ZMV9 814 aa12.31□□□□□ -0.44
TRPM1-212ENST00000560801 TSPYL4Q9UJ04 414 aa12.31□□□□□ -0.44
TRPM1-212ENST00000560801 PTCD1O75127 700 aaKnown RBP12.31□□□□□ -0.44
TRPM1-212ENST00000560801 ACSBG1Q96GR2 724 aa12.31□□□□□ -0.44
TRPM1-212ENST00000560801 SCAF11Q99590 1463 aaKnown RBP12.31□□□□□ -0.44
TRPM1-212ENST00000560801 HSP90B1P14625 803 aaKnown RBP12.31□□□□□ -0.44
TRPM1-212ENST00000560801 ZRANB1Q9UGI0 708 aa12.31□□□□□ -0.44
TRPM1-212ENST00000560801 BICDL1Q6ZP65 573 aa12.3□□□□□ -0.44
TRPM1-212ENST00000560801 ANKRD24Q8TF21 1146 aa12.3□□□□□ -0.44
TRPM1-212ENST00000560801 APBA3O96018 575 aa12.3□□□□□ -0.44
TRPM1-212ENST00000560801 TFCP2L1Q9NZI6 479 aa12.3□□□□□ -0.44
TRPM1-212ENST00000560801 MYO5CQ9NQX4 1742 aa12.29□□□□□ -0.44
TRPM1-212ENST00000560801 STARD3NLO95772 234 aa12.29□□□□□ -0.44
TRPM1-212ENST00000560801 AIMP1Q12904 312 aaKnown RBP12.29□□□□□ -0.44
TRPM1-212ENST00000560801 RIPK4P57078 832 aa12.29□□□□□ -0.44
TRPM1-212ENST00000560801 ARHGEF10O15013 1369 aa12.29□□□□□ -0.44
TRPM1-212ENST00000560801 SHANK2Q9UPX8 1470 aa12.28□□□□□ -0.44
TRPM1-212ENST00000560801 ARAP3Q8WWN8 1544 aa12.28□□□□□ -0.44
TRPM1-212ENST00000560801 CDCA7Q9BWT1 371 aaPredicted RBP12.28□□□□□ -0.44
TRPM1-212ENST00000560801 USHBP1Q8N6Y0 703 aa12.28□□□□□ -0.44
TRPM1-212ENST00000560801 GCP02774 474 aa12.28□□□□□ -0.44
TRPM1-212ENST00000560801 HECW2Q9P2P5 1572 aa12.28□□□□□ -0.44
TRPM1-212ENST00000560801 VPS37DQ86XT2 251 aa12.27□□□□□ -0.45
TRPM1-212ENST00000560801 TTC21AQ8NDW8 1320 aa12.27□□□□□ -0.45
TRPM1-212ENST00000560801 PHF14O94880 888 aa12.27□□□□□ -0.45
TRPM1-212ENST00000560801 RIC3Q7Z5B4 369 aa12.26□□□□□ -0.45
TRPM1-212ENST00000560801 IL2RBP14784 551 aa12.26□□□□□ -0.45
TRPM1-212ENST00000560801 ZCRB1Q8TBF4 217 aaKnown RBP12.26□□□□□ -0.45
TRPM1-212ENST00000560801 SMARCC1Q92922 1105 aaPredicted RBP12.26□□□□□ -0.45
TRPM1-212ENST00000560801 AMOTQ4VCS5 1084 aa12.25□□□□□ -0.45
TRPM1-212ENST00000560801 TTC37Q6PGP7 1564 aa12.25□□□□□ -0.45
TRPM1-212ENST00000560801 NPATQ14207 1427 aa12.25□□□□□ -0.45
TRPM1-212ENST00000560801 C9orf78Q9NZ63 289 aaPredicted RBP12.25□□□□□ -0.45
TRPM1-212ENST00000560801 PRKAR2BP31323 418 aa12.25□□□□□ -0.45
TRPM1-212ENST00000560801 C11orf95C9JLR9 678 aaPredicted RBP12.24□□□□□ -0.45
TRPM1-212ENST00000560801 RFC4P35249 363 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms