RNA–Protein interactions for RNA: ENST00000560631.1

RNF31-222, Transcript of ring finger protein 31, human

TSL 2

Gene RNF31, Length 320 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-222	ENST00000560631	SIN3A	Q96ST3	1273 aa		11.66	□□□□□ -0.54
RNF31-222	ENST00000560631	TMEM94	Q12767	1356 aa		11.64	□□□□□ -0.55
RNF31-222	ENST00000560631	ABCC11	Q96J66	1382 aa		11.64	□□□□□ -0.55
RNF31-222	ENST00000560631	KIAA1210	Q9ULL0	1709 aa		11.63	□□□□□ -0.55
RNF31-222	ENST00000560631	PTCH1	Q13635	1447 aa		11.63	□□□□□ -0.55
RNF31-222	ENST00000560631	SIRT1	Q96EB6	747 aa		11.63	□□□□□ -0.55
RNF31-222	ENST00000560631	KDM2A	Q9Y2K7	1162 aa		11.63	□□□□□ -0.55
RNF31-222	ENST00000560631	LRPPRC	P42704	1394 aa	Known RBP	11.63	□□□□□ -0.55
RNF31-222	ENST00000560631	KNDC1	Q76NI1	1749 aa		11.63	□□□□□ -0.55
RNF31-222	ENST00000560631	TECPR2	O15040	1411 aa		11.62	□□□□□ -0.55
RNF31-222	ENST00000560631	ASXL1	Q8IXJ9	1541 aa		11.62	□□□□□ -0.55
RNF31-222	ENST00000560631	TOM1	O60784	492 aa		11.62	□□□□□ -0.55
RNF31-222	ENST00000560631	CFAP70	Q5T0N1	1121 aa		11.62	□□□□□ -0.55
RNF31-222	ENST00000560631	L3MBTL2	Q969R5	705 aa		11.62	□□□□□ -0.55
RNF31-222	ENST00000560631	SPDYE2B	A6NHP3	402 aa		11.61	□□□□□ -0.55
RNF31-222	ENST00000560631	SPDYE6	P0CI01	402 aa		11.61	□□□□□ -0.55
RNF31-222	ENST00000560631	MKRN4P	Q13434	485 aa	Predicted RBP	11.61	□□□□□ -0.55
RNF31-222	ENST00000560631	NEUROD1	Q13562	356 aa		11.61	□□□□□ -0.55
RNF31-222	ENST00000560631	SPDYE2	Q495Y8	402 aa		11.61	□□□□□ -0.55
RNF31-222	ENST00000560631	YTHDC2	Q9H6S0	1430 aa	Known RBP	11.6	□□□□□ -0.55
RNF31-222	ENST00000560631	ADGRB1	O14514	1584 aa		11.6	□□□□□ -0.55
RNF31-222	ENST00000560631	C19orf44	Q9H6X5	657 aa		11.6	□□□□□ -0.55
RNF31-222	ENST00000560631	MSH6	P52701	1360 aa		11.59	□□□□□ -0.55
RNF31-222	ENST00000560631	ROBO2	Q9HCK4	1378 aa		11.59	□□□□□ -0.55
RNF31-222	ENST00000560631	UBAP1L	F5GYI3	381 aa		11.59	□□□□□ -0.55
RNF31-222	ENST00000560631	TMEM132E	Q6IEE7	984 aa		11.59	□□□□□ -0.55
RNF31-222	ENST00000560631	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	11.59	□□□□□ -0.55
RNF31-222	ENST00000560631	DCC	P43146	1447 aa		11.59	□□□□□ -0.55
RNF31-222	ENST00000560631	FAM135B	Q49AJ0	1406 aa		11.59	□□□□□ -0.55
RNF31-222	ENST00000560631	ILDR1	Q86SU0	546 aa	Predicted RBP	11.58	□□□□□ -0.56
RNF31-222	ENST00000560631	DLC1	Q96QB1	1528 aa		11.58	□□□□□ -0.56
RNF31-222	ENST00000560631	TIMELESS	Q9UNS1	1208 aa		11.57	□□□□□ -0.56
RNF31-222	ENST00000560631	ADGRL3	Q9HAR2	1447 aa		11.57	□□□□□ -0.56
RNF31-222	ENST00000560631	CADPS2	Q86UW7	1296 aa		11.56	□□□□□ -0.56
RNF31-222	ENST00000560631	RBM33	Q96EV2	1170 aa	Known RBP	11.56	□□□□□ -0.56
RNF31-222	ENST00000560631	TONSL	Q96HA7	1378 aa		11.55	□□□□□ -0.56
RNF31-222	ENST00000560631	NALCN	Q8IZF0	1738 aa		11.55	□□□□□ -0.56
RNF31-222	ENST00000560631	STK26	Q9P289	416 aa		11.55	□□□□□ -0.56
RNF31-222	ENST00000560631	TRPM1	Q7Z4N2	1603 aa		11.55	□□□□□ -0.56
RNF31-222	ENST00000560631	ATF3	P18847	181 aa		11.53	□□□□□ -0.56
RNF31-222	ENST00000560631	NBPF1	Q3BBV0	1214 aa		11.53	□□□□□ -0.56
RNF31-222	ENST00000560631	NBPF8	Q3BBV2	869 aa		11.53	□□□□□ -0.56
RNF31-222	ENST00000560631	WAPL	Q7Z5K2	1190 aa		11.53	□□□□□ -0.56
RNF31-222	ENST00000560631	SLAIN2	Q9P270	581 aa		11.53	□□□□□ -0.56
RNF31-222	ENST00000560631	ARHGEF28	Q8N1W1	1705 aa	Known RBP	11.52	□□□□□ -0.56
RNF31-222	ENST00000560631	C14orf37	Q86TY3	774 aa		11.52	□□□□□ -0.57
RNF31-222	ENST00000560631	GPRASP1	Q5JY77	1395 aa		11.52	□□□□□ -0.57
RNF31-222	ENST00000560631	PLEKHH1	Q9ULM0	1364 aa		11.52	□□□□□ -0.57
RNF31-222	ENST00000560631	CCER1	Q8TC90	406 aa	Predicted RBP	11.51	□□□□□ -0.57
RNF31-222	ENST00000560631	TRAK1	Q9UPV9	953 aa		11.51	□□□□□ -0.57
RNF31-222	ENST00000560631	MST1R	Q04912	1400 aa		11.51	□□□□□ -0.57
RNF31-222	ENST00000560631	CDC42BPG	Q6DT37	1551 aa		11.5	□□□□□ -0.57
RNF31-222	ENST00000560631	PRAM1	Q96QH2	718 aa		11.5	□□□□□ -0.57
RNF31-222	ENST00000560631	ROBO1	Q9Y6N7	1651 aa		11.49	□□□□□ -0.57
RNF31-222	ENST00000560631	PIP4K2B	P78356	416 aa		11.49	□□□□□ -0.57
RNF31-222	ENST00000560631	EVX2	Q03828	476 aa		11.49	□□□□□ -0.57
RNF31-222	ENST00000560631	POGK	Q9P215	609 aa		11.49	□□□□□ -0.57
RNF31-222	ENST00000560631	RALGAPB	Q86X10	1494 aa		11.49	□□□□□ -0.57
RNF31-222	ENST00000560631	ADGRB2	O60241	1585 aa		11.49	□□□□□ -0.57
RNF31-222	ENST00000560631	SSUH2	Q9Y2M2	353 aa		11.48	□□□□□ -0.57
RNF31-222	ENST00000560631	C1orf167	Q5SNV9	1468 aa		11.48	□□□□□ -0.57
RNF31-222	ENST00000560631	FMN2	Q9NZ56	1722 aa		11.48	□□□□□ -0.57
RNF31-222	ENST00000560631	ROCK2	O75116	1388 aa	Known RBP	11.47	□□□□□ -0.57
RNF31-222	ENST00000560631	BRINP3	Q76B58	766 aa		11.46	□□□□□ -0.57
RNF31-222	ENST00000560631	RGPD8	O14715	1765 aa	Predicted RBP	11.46	□□□□□ -0.58
RNF31-222	ENST00000560631	AHDC1	Q5TGY3	1603 aa	Predicted RBP	11.46	□□□□□ -0.58
RNF31-222	ENST00000560631	HSPA1L	P34931	641 aa		11.45	□□□□□ -0.58
RNF31-222	ENST00000560631	CENPJ	Q9HC77	1338 aa	Predicted RBP	11.44	□□□□□ -0.58
RNF31-222	ENST00000560631	PRKAR2A	P13861	404 aa	Known RBP	11.44	□□□□□ -0.58
RNF31-222	ENST00000560631	SAFB2	Q14151	953 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
RNF31-222	ENST00000560631	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.44	□□□□□ -0.58
RNF31-222	ENST00000560631	NHSL1	Q5SYE7	1610 aa		11.44	□□□□□ -0.58
RNF31-222	ENST00000560631	ANKAR	Q7Z5J8	1434 aa		11.43	□□□□□ -0.58
RNF31-222	ENST00000560631	EIF3A	Q14152	1382 aa	Known RBP	11.43	□□□□□ -0.58
RNF31-222	ENST00000560631	WASL	O00401	505 aa	Predicted RBP	11.43	□□□□□ -0.58
RNF31-222	ENST00000560631	ZNF692	Q9BU19	519 aa	Predicted RBP	11.43	□□□□□ -0.58
RNF31-222	ENST00000560631	CARD11	Q9BXL7	1154 aa		11.43	□□□□□ -0.58
RNF31-222	ENST00000560631	CLEC11A	Q9Y240	323 aa		11.43	□□□□□ -0.58
RNF31-222	ENST00000560631	PHLPP1	O60346	1717 aa		11.43	□□□□□ -0.58
RNF31-222	ENST00000560631	QRICH2	Q9H0J4	1663 aa		11.43	□□□□□ -0.58
RNF31-222	ENST00000560631	SBNO2	Q9Y2G9	1366 aa		11.42	□□□□□ -0.58
RNF31-222	ENST00000560631	MINK1	Q8N4C8	1332 aa	Predicted RBP	11.42	□□□□□ -0.58
RNF31-222	ENST00000560631	TULP4	Q9NRJ4	1543 aa		11.41	□□□□□ -0.58
RNF31-222	ENST00000560631	ORAI2	Q96SN7	254 aa		11.41	□□□□□ -0.58
RNF31-222	ENST00000560631	COL16A1	Q07092	1604 aa	Predicted RBP	11.41	□□□□□ -0.58
RNF31-222	ENST00000560631	USP32	Q8NFA0	1604 aa		11.41	□□□□□ -0.58
RNF31-222	ENST00000560631	KIF1A	Q12756	1690 aa		11.4	□□□□□ -0.58
RNF31-222	ENST00000560631	HIRIP3	Q9BW71	556 aa	Predicted RBP	11.4	□□□□□ -0.58
RNF31-222	ENST00000560631	SOS2	Q07890	1332 aa	Predicted RBP	11.39	□□□□□ -0.59
RNF31-222	ENST00000560631	SLC24A1	O60721	1099 aa		11.39	□□□□□ -0.59
RNF31-222	ENST00000560631	ESCO1	Q5FWF5	840 aa		11.39	□□□□□ -0.59
RNF31-222	ENST00000560631	CDK19	Q9BWU1	502 aa		11.39	□□□□□ -0.59
RNF31-222	ENST00000560631	NPHP3	Q7Z494	1330 aa		11.38	□□□□□ -0.59
RNF31-222	ENST00000560631	PRR36	Q9H6K5	1346 aa		11.38	□□□□□ -0.59
RNF31-222	ENST00000560631	ITSN1	Q15811	1721 aa		11.38	□□□□□ -0.59
RNF31-222	ENST00000560631	PHF8	Q9UPP1	1060 aa		11.38	□□□□□ -0.59
RNF31-222	ENST00000560631	ATP7B	P35670	1465 aa		11.38	□□□□□ -0.59
RNF31-222	ENST00000560631	NUTM2F	A1L443	756 aa		11.37	□□□□□ -0.59
RNF31-222	ENST00000560631	LRRC59	Q96AG4	307 aa	Known RBP	11.37	□□□□□ -0.59
RNF31-222	ENST00000560631	NUDT16	Q96DE0	195 aa	Known RBP	11.37	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms