RNA–Protein interactions for RNA: ENST00000560540.5

SHF-207, Transcript of Src homology 2 domain containing F, humanhuman

TSL 5 BASIC

Gene SHF, Length 2,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-207ENST00000560540 NEXMIFQ5QGS0 1516 aa32.26■■■□□ 2.76
SHF-207ENST00000560540 A2ML1A8K2U0 1454 aa32.26■■■□□ 2.76
SHF-207ENST00000560540 AMER1Q5JTC6 1135 aaPredicted RBP32.26■■■□□ 2.75
SHF-207ENST00000560540 MYOM2P54296 1465 aa32.26■■■□□ 2.75
SHF-207ENST00000560540 NPM2Q86SE8 214 aaKnown RBP32.25■■■□□ 2.75
SHF-207ENST00000560540 RPGRIP1LQ68CZ1 1315 aa32.25■■■□□ 2.75
SHF-207ENST00000560540 ZNF521Q96K83 1311 aa32.25■■■□□ 2.75
SHF-207ENST00000560540 PLEKHH1Q9ULM0 1364 aa32.24■■■□□ 2.75
SHF-207ENST00000560540 WDR43Q15061 677 aaKnown RBP eCLIP32.23■■■□□ 2.75
SHF-207ENST00000560540 KDM2BQ8NHM5 1336 aa32.21■■■□□ 2.75
SHF-207ENST00000560540 EIF3AQ14152 1382 aaKnown RBP32.21■■■□□ 2.75
SHF-207ENST00000560540 DUSP27Q5VZP5 1158 aa32.2■■■□□ 2.75
SHF-207ENST00000560540 NRXN1Q9ULB1 1477 aa32.19■■■□□ 2.74
SHF-207ENST00000560540 NLRP1Q9C000 1473 aa32.19■■■□□ 2.74
SHF-207ENST00000560540 USP35Q9P2H5 1018 aa32.17■■■□□ 2.74
SHF-207ENST00000560540 SENP3Q9H4L4 574 aaPredicted RBP32.17■■■□□ 2.74
SHF-207ENST00000560540 UBR1Q8IWV7 1749 aa32.16■■■□□ 2.74
SHF-207ENST00000560540 DDRGK1Q96HY6 314 aa32.16■■■□□ 2.74
SHF-207ENST00000560540 PTPRMP28827 1452 aa32.16■■■□□ 2.74
SHF-207ENST00000560540 CFAP70Q5T0N1 1121 aa32.15■■■□□ 2.74
SHF-207ENST00000560540 CENPQQ7L2Z9 268 aaPredicted RBP32.15■■■□□ 2.74
SHF-207ENST00000560540 VGFO15240 615 aaPredicted RBP32.14■■■□□ 2.74
SHF-207ENST00000560540 GOLGA2Q08379 1002 aa32.14■■■□□ 2.74
SHF-207ENST00000560540 C20orf194Q5TEA3 1177 aa32.14■■■□□ 2.74
SHF-207ENST00000560540 MYO3AQ8NEV4 1616 aa32.13■■■□□ 2.73
SHF-207ENST00000560540 GOLGA6L2Q8N9W4 650 aaPredicted RBP32.13■■■□□ 2.73
SHF-207ENST00000560540 RIMS2Q9UQ26 1411 aa32.12■■■□□ 2.73
SHF-207ENST00000560540 PPM1GO15355 546 aaPredicted RBP32.1■■■□□ 2.73
SHF-207ENST00000560540 KDM4FA0A1W2PPD8 638 aa32.09■■■□□ 2.73
SHF-207ENST00000560540 ZFYVE9O95405 1425 aa32.09■■■□□ 2.73
SHF-207ENST00000560540 SLC24A1O60721 1099 aa32.08■■■□□ 2.73
SHF-207ENST00000560540 SLFN5Q08AF3 891 aa32.07■■■□□ 2.73
SHF-207ENST00000560540 TRMT2AQ8IZ69 625 aaKnown RBP32.06■■■□□ 2.72
SHF-207ENST00000560540 TMEM2Q9UHN6 1383 aa32.06■■■□□ 2.72
SHF-207ENST00000560540 NKTRP30414 1462 aaKnown RBP32.04■■■□□ 2.72
SHF-207ENST00000560540 C14orf93Q9H972 538 aaKnown RBP32.04■■■□□ 2.72
SHF-207ENST00000560540 CEP170BQ9Y4F5 1589 aaPredicted RBP32.03■■■□□ 2.72
SHF-207ENST00000560540 SETD1BQ9UPS6 1966 aaKnown RBP32.01■■■□□ 2.71
SHF-207ENST00000560540 NEFMP07197 916 aa32■■■□□ 2.71
SHF-207ENST00000560540 SKAP1Q86WV1 359 aa32■■■□□ 2.71
SHF-207ENST00000560540 NGEFQ8N5V2 710 aa32■■■□□ 2.71
SHF-207ENST00000560540 LAS1LQ9Y4W2 734 aaKnown RBP32■■■□□ 2.71
SHF-207ENST00000560540 VIRMAQ69YN4 1812 aaKnown RBP31.99■■■□□ 2.71
SHF-207ENST00000560540 TMEM132EQ6IEE7 984 aa31.99■■■□□ 2.71
SHF-207ENST00000560540 LTKP29376 864 aa31.98■■■□□ 2.71
SHF-207ENST00000560540 THEMISQ8N1K5 641 aaPredicted RBP31.97■■■□□ 2.71
SHF-207ENST00000560540 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.97■■■□□ 2.71
SHF-207ENST00000560540 FAM161AQ3B820 660 aa31.96■■■□□ 2.71
SHF-207ENST00000560540 ADGRB1O14514 1584 aa31.95■■■□□ 2.71
SHF-207ENST00000560540 SBNO2Q9Y2G9 1366 aa31.94■■■□□ 2.7
SHF-207ENST00000560540 ARHGAP23Q9P227 1491 aa31.94■■■□□ 2.7
SHF-207ENST00000560540 ZNF142P52746 1687 aaPredicted RBP31.94■■■□□ 2.7
SHF-207ENST00000560540 SLIT1O75093 1534 aa31.93■■■□□ 2.7
SHF-207ENST00000560540 SETBP1Q9Y6X0 1596 aa31.92■■■□□ 2.7
SHF-207ENST00000560540 HDGFP51858 240 aaKnown RBP31.92■■■□□ 2.7
SHF-207ENST00000560540 TXNDC2Q86VQ3 553 aa31.92■■■□□ 2.7
SHF-207ENST00000560540 E9PSI1 815 aa31.91■■■□□ 2.7
SHF-207ENST00000560540 ALKQ9UM73 1620 aa31.91■■■□□ 2.7
SHF-207ENST00000560540 C8orf34Q49A92 452 aa31.9■■■□□ 2.7
SHF-207ENST00000560540 NRXN3Q9Y4C0 1643 aa31.9■■■□□ 2.7
SHF-207ENST00000560540 NINLQ9Y2I6 1382 aa31.9■■■□□ 2.7
SHF-207ENST00000560540 CCDC146Q8IYE0 955 aa31.89■■■□□ 2.7
SHF-207ENST00000560540 APAF1O14727 1248 aa31.88■■■□□ 2.69
SHF-207ENST00000560540 POLR3AO14802 1390 aaPredicted RBP31.87■■■□□ 2.69
SHF-207ENST00000560540 SHPRHQ149N8 1683 aa31.87■■■□□ 2.69
SHF-207ENST00000560540 EID1Q9Y6B2 187 aa31.87■■■□□ 2.69
SHF-207ENST00000560540 TRAK1Q9UPV9 953 aa31.85■■■□□ 2.69
SHF-207ENST00000560540 SPINK5Q9NQ38 1064 aaPredicted RBP31.85■■■□□ 2.69
SHF-207ENST00000560540 SETD1AO15047 1707 aaKnown RBP31.83■■■□□ 2.69
SHF-207ENST00000560540 PLEKHG1Q9ULL1 1385 aa31.82■■■□□ 2.68
SHF-207ENST00000560540 USP32Q8NFA0 1604 aa31.82■■■□□ 2.68
SHF-207ENST00000560540 CARD14Q9BXL6 1004 aa31.81■■■□□ 2.68
SHF-207ENST00000560540 STK26Q9P289 416 aa31.8■■■□□ 2.68
SHF-207ENST00000560540 ADAMTS13Q76LX8 1427 aa31.79■■■□□ 2.68
SHF-207ENST00000560540 CGNL1Q0VF96 1302 aa31.79■■■□□ 2.68
SHF-207ENST00000560540 QRICH2Q9H0J4 1663 aa31.79■■■□□ 2.68
SHF-207ENST00000560540 METP08581 1390 aa31.78■■■□□ 2.68
SHF-207ENST00000560540 PDE3AQ14432 1141 aa31.78■■■□□ 2.68
SHF-207ENST00000560540 DAXXQ9UER7 740 aaPredicted RBP31.77■■■□□ 2.68
SHF-207ENST00000560540 BCAR3O75815 825 aa31.76■■■□□ 2.68
SHF-207ENST00000560540 SLC26A8Q96RN1 970 aa31.76■■■□□ 2.68
SHF-207ENST00000560540 YTHDC2Q9H6S0 1430 aaKnown RBP31.76■■■□□ 2.67
SHF-207ENST00000560540 ANKLE2Q86XL3 938 aa31.73■■■□□ 2.67
SHF-207ENST00000560540 IQSEC2Q5JU85 1478 aa31.73■■■□□ 2.67
SHF-207ENST00000560540 CENPJQ9HC77 1338 aaPredicted RBP31.72■■■□□ 2.67
SHF-207ENST00000560540 RGS3P49796 1198 aa31.71■■■□□ 2.67
SHF-207ENST00000560540 NFKBIBQ15653 356 aa31.71■■■□□ 2.67
SHF-207ENST00000560540 ARHGEF28Q8N1W1 1705 aaKnown RBP31.71■■■□□ 2.67
SHF-207ENST00000560540 MED14O60244 1454 aa31.71■■■□□ 2.67
SHF-207ENST00000560540 DMRT2Q9Y5R5 561 aa31.71■■■□□ 2.67
SHF-207ENST00000560540 WWC1Q8IX03 1113 aa31.69■■■□□ 2.66
SHF-207ENST00000560540 NSD3Q9BZ95 1437 aa31.69■■■□□ 2.66
SHF-207ENST00000560540 SAFB2Q14151 953 aaKnown RBP eCLIP31.66■■■□□ 2.66
SHF-207ENST00000560540 MAPK8IP3Q9UPT6 1336 aa31.66■■■□□ 2.66
SHF-207ENST00000560540 HSPA2P54652 639 aa31.65■■■□□ 2.66
SHF-207ENST00000560540 AAMPQ13685 434 aa31.65■■■□□ 2.66
SHF-207ENST00000560540 AEBP2Q6ZN18 517 aaPredicted RBP31.65■■■□□ 2.66
SHF-207ENST00000560540 CLUAP1Q96AJ1 413 aa31.65■■■□□ 2.66
SHF-207ENST00000560540 NCKAP5LQ9HCH0 1330 aa31.64■■■□□ 2.66
SHF-207ENST00000560540 SLC4A3P48751 1232 aa31.64■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms