RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 STK26Q9P289 416 aa21.6■■□□□ 1.05
IDH3A-219ENST00000560414 DCCP43146 1447 aa21.6■■□□□ 1.05
IDH3A-219ENST00000560414 PTCH1Q13635 1447 aa21.6■■□□□ 1.05
IDH3A-219ENST00000560414 BRINP3Q76B58 766 aa21.59■■□□□ 1.05
IDH3A-219ENST00000560414 PHLPP1O60346 1717 aa21.58■■□□□ 1.05
IDH3A-219ENST00000560414 PIK3C2GO75747 1445 aa21.58■■□□□ 1.05
IDH3A-219ENST00000560414 MKRN4PQ13434 485 aaPredicted RBP21.58■■□□□ 1.05
IDH3A-219ENST00000560414 MST1RQ04912 1400 aa21.57■■□□□ 1.04
IDH3A-219ENST00000560414 ZBTB12Q9Y330 459 aaPredicted RBP21.57■■□□□ 1.04
IDH3A-219ENST00000560414 NALCNQ8IZF0 1738 aa21.57■■□□□ 1.04
IDH3A-219ENST00000560414 PRAG1Q86YV5 1406 aa21.55■■□□□ 1.04
IDH3A-219ENST00000560414 CFAP70Q5T0N1 1121 aa21.54■■□□□ 1.04
IDH3A-219ENST00000560414 C14orf93Q9H972 538 aaKnown RBP21.54■■□□□ 1.04
IDH3A-219ENST00000560414 ASXL1Q8IXJ9 1541 aa21.54■■□□□ 1.04
IDH3A-219ENST00000560414 LRPPRCP42704 1394 aaKnown RBP21.53■■□□□ 1.04
IDH3A-219ENST00000560414 WAPLQ7Z5K2 1190 aa21.53■■□□□ 1.04
IDH3A-219ENST00000560414 COL16A1Q07092 1604 aaPredicted RBP21.52■■□□□ 1.04
IDH3A-219ENST00000560414 MYOM2P54296 1465 aa21.52■■□□□ 1.03
IDH3A-219ENST00000560414 NRXN1Q9ULB1 1477 aa21.52■■□□□ 1.03
IDH3A-219ENST00000560414 JCADQ9P266 1359 aa21.51■■□□□ 1.03
IDH3A-219ENST00000560414 KDM2AQ9Y2K7 1162 aa21.51■■□□□ 1.03
IDH3A-219ENST00000560414 AHDC1Q5TGY3 1603 aaPredicted RBP21.51■■□□□ 1.03
IDH3A-219ENST00000560414 ABCC11Q96J66 1382 aa21.5■■□□□ 1.03
IDH3A-219ENST00000560414 DDX17Q92841 729 aaKnown RBP21.5■■□□□ 1.03
IDH3A-219ENST00000560414 PLEKHH1Q9ULM0 1364 aa21.49■■□□□ 1.03
IDH3A-219ENST00000560414 YTHDC2Q9H6S0 1430 aaKnown RBP21.49■■□□□ 1.03
IDH3A-219ENST00000560414 DCAF11Q8TEB1 546 aa21.49■■□□□ 1.03
IDH3A-219ENST00000560414 C1orf167Q5SNV9 1468 aa21.49■■□□□ 1.03
IDH3A-219ENST00000560414 TECPR2O15040 1411 aa21.48■■□□□ 1.03
IDH3A-219ENST00000560414 ORAI2Q96SN7 254 aa21.47■■□□□ 1.03
IDH3A-219ENST00000560414 RGS17Q9UGC6 210 aaPredicted RBP21.47■■□□□ 1.03
IDH3A-219ENST00000560414 SOCS7O14512 581 aa21.45■■□□□ 1.02
IDH3A-219ENST00000560414 DHX57Q6P158 1386 aaKnown RBP21.45■■□□□ 1.02
IDH3A-219ENST00000560414 NUTM2FA1L443 756 aa21.43■■□□□ 1.02
IDH3A-219ENST00000560414 KNDC1Q76NI1 1749 aa21.43■■□□□ 1.02
IDH3A-219ENST00000560414 NHSL1Q5SYE7 1610 aa21.42■■□□□ 1.02
IDH3A-219ENST00000560414 LAMC1P11047 1609 aa21.41■■□□□ 1.02
IDH3A-219ENST00000560414 SIRT1Q96EB6 747 aa21.41■■□□□ 1.02
IDH3A-219ENST00000560414 SPATA31A6Q5VVP1 1343 aa21.4■■□□□ 1.02
IDH3A-219ENST00000560414 SAFB2Q14151 953 aaKnown RBP eCLIP21.4■■□□□ 1.02
IDH3A-219ENST00000560414 ESCO1Q5FWF5 840 aa21.4■■□□□ 1.02
IDH3A-219ENST00000560414 LRRC59Q96AG4 307 aaKnown RBP21.4■■□□□ 1.02
IDH3A-219ENST00000560414 CDC42BPGQ6DT37 1551 aa21.4■■□□□ 1.02
IDH3A-219ENST00000560414 PRAM1Q96QH2 718 aa21.39■■□□□ 1.01
IDH3A-219ENST00000560414 LRP6O75581 1613 aa21.39■■□□□ 1.01
IDH3A-219ENST00000560414 NUTM2BA6NNL0 878 aaPredicted RBP21.38■■□□□ 1.01
IDH3A-219ENST00000560414 NUTM2EB1AL46 878 aaPredicted RBP21.38■■□□□ 1.01
IDH3A-219ENST00000560414 NUTM2AQ8IVF1 878 aaPredicted RBP21.38■■□□□ 1.01
IDH3A-219ENST00000560414 STAC3Q96MF2 364 aa21.38■■□□□ 1.01
IDH3A-219ENST00000560414 TRAK1Q9UPV9 953 aa21.38■■□□□ 1.01
IDH3A-219ENST00000560414 SHPRHQ149N8 1683 aa21.37■■□□□ 1.01
IDH3A-219ENST00000560414 ADGRB1O14514 1584 aa21.37■■□□□ 1.01
IDH3A-219ENST00000560414 POTEAQ6S8J7 498 aa21.37■■□□□ 1.01
IDH3A-219ENST00000560414 MEX3CQ5U5Q3 659 aaKnown RBP21.36■■□□□ 1.01
IDH3A-219ENST00000560414 POGKQ9P215 609 aa21.36■■□□□ 1.01
IDH3A-219ENST00000560414 SOS2Q07890 1332 aaPredicted RBP21.34■■□□□ 1.01
IDH3A-219ENST00000560414 FOXO3O43524 673 aa21.33■■□□□ 1.01
IDH3A-219ENST00000560414 PNPLA6Q8IY17 1366 aa21.33■■□□□ 1
IDH3A-219ENST00000560414 XPCQ01831 940 aaPredicted RBP21.32■■□□□ 1
IDH3A-219ENST00000560414 SIN3AQ96ST3 1273 aa21.32■■□□□ 1
IDH3A-219ENST00000560414 DLC1Q96QB1 1528 aa21.32■■□□□ 1
IDH3A-219ENST00000560414 SPDYE4A6NLX3 237 aa21.31■■□□□ 1
IDH3A-219ENST00000560414 NPHP3Q7Z494 1330 aa21.3■■□□□ 1
IDH3A-219ENST00000560414 FMN2Q9NZ56 1722 aa21.3■■□□□ 1
IDH3A-219ENST00000560414 HIRIP3Q9BW71 556 aaPredicted RBP21.3■■□□□ 1
IDH3A-219ENST00000560414 MINK1Q8N4C8 1332 aaPredicted RBP21.28■■□□□ 1
IDH3A-219ENST00000560414 NEUROD1Q13562 356 aa21.27■■□□□ 1
IDH3A-219ENST00000560414 L3MBTL2Q969R5 705 aa21.26■□□□□ 0.99
IDH3A-219ENST00000560414 PXDNQ92626 1479 aa21.26■□□□□ 0.99
IDH3A-219ENST00000560414 TRIM26Q12899 539 aaPredicted RBP21.25■□□□□ 0.99
IDH3A-219ENST00000560414 NBPF1Q3BBV0 1214 aa21.25■□□□□ 0.99
IDH3A-219ENST00000560414 ADAMTS2O95450 1211 aa21.24■□□□□ 0.99
IDH3A-219ENST00000560414 PHF8Q9UPP1 1060 aa21.24■□□□□ 0.99
IDH3A-219ENST00000560414 RGPD8O14715 1765 aaPredicted RBP21.23■□□□□ 0.99
IDH3A-219ENST00000560414 ZNF772Q68DY9 489 aaPredicted RBP21.23■□□□□ 0.99
IDH3A-219ENST00000560414 C8orf37Q96NL8 207 aa21.23■□□□□ 0.99
IDH3A-219ENST00000560414 AFF2P51816 1311 aa21.22■□□□□ 0.99
IDH3A-219ENST00000560414 KRT28Q7Z3Y7 464 aa21.21■□□□□ 0.99
IDH3A-219ENST00000560414 ADGRB2O60241 1585 aa21.2■□□□□ 0.98
IDH3A-219ENST00000560414 WASLO00401 505 aaPredicted RBP21.2■□□□□ 0.98
IDH3A-219ENST00000560414 PMFBP1Q8TBY8 1022 aa21.2■□□□□ 0.98
IDH3A-219ENST00000560414 KIF1AQ12756 1690 aa21.19■□□□□ 0.98
IDH3A-219ENST00000560414 PRR36Q9H6K5 1346 aa21.19■□□□□ 0.98
IDH3A-219ENST00000560414 ARHGEF28Q8N1W1 1705 aaKnown RBP21.18■□□□□ 0.98
IDH3A-219ENST00000560414 ANKARQ7Z5J8 1434 aa21.18■□□□□ 0.98
IDH3A-219ENST00000560414 USP32Q8NFA0 1604 aa21.18■□□□□ 0.98
IDH3A-219ENST00000560414 KIAA1210Q9ULL0 1709 aa21.18■□□□□ 0.98
IDH3A-219ENST00000560414 NGLY1Q96IV0 654 aa21.17■□□□□ 0.98
IDH3A-219ENST00000560414 SPATA31A3Q5VYP0 1347 aa21.17■□□□□ 0.98
IDH3A-219ENST00000560414 COL22A1Q8NFW1 1626 aaPredicted RBP21.15■□□□□ 0.98
IDH3A-219ENST00000560414 PSME1Q06323 249 aa21.15■□□□□ 0.98
IDH3A-219ENST00000560414 TULP4Q9NRJ4 1543 aa21.14■□□□□ 0.97
IDH3A-219ENST00000560414 EIF3AQ14152 1382 aaKnown RBP21.13■□□□□ 0.97
IDH3A-219ENST00000560414 PLEKHG5O94827 1062 aa21.12■□□□□ 0.97
IDH3A-219ENST00000560414 RXRBP28702 533 aa21.12■□□□□ 0.97
IDH3A-219ENST00000560414 LMOD2Q6P5Q4 547 aa21.12■□□□□ 0.97
IDH3A-219ENST00000560414 CDK19Q9BWU1 502 aa21.12■□□□□ 0.97
IDH3A-219ENST00000560414 QTRT2Q9H974 415 aaKnown RBP21.12■□□□□ 0.97
IDH3A-219ENST00000560414 NUDT16Q96DE0 195 aaKnown RBP21.11■□□□□ 0.97
IDH3A-219ENST00000560414 TNS3Q68CZ2 1445 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms