RNA–Protein interactions for RNA: ENST00000560328.1

NEO1-208, Transcript of neogenin 1, human

TSL 1 (best)

Gene NEO1, Length 5,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEO1-208	ENST00000560328	DIAPH3	Q9NSV4	1193 aa		11.51	□□□□□ -0.57
NEO1-208	ENST00000560328	SLC26A8	Q96RN1	970 aa		11.51	□□□□□ -0.57
NEO1-208	ENST00000560328	ZNF692	Q9BU19	519 aa	Predicted RBP	11.51	□□□□□ -0.57
NEO1-208	ENST00000560328	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.51	□□□□□ -0.57
NEO1-208	ENST00000560328	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.51	□□□□□ -0.57
NEO1-208	ENST00000560328	IFIT2	P09913	472 aa	Known RBP	11.5	□□□□□ -0.57
NEO1-208	ENST00000560328	AKNA	Q7Z591	1439 aa		11.5	□□□□□ -0.57
NEO1-208	ENST00000560328	RTEL1-TNFRSF6B	F6WH68	1400 aa		11.5	□□□□□ -0.57
NEO1-208	ENST00000560328	AAMP	Q13685	434 aa		11.5	□□□□□ -0.57
NEO1-208	ENST00000560328	LNPK	Q9C0E8	428 aa		11.5	□□□□□ -0.57
NEO1-208	ENST00000560328	EXOSC9	Q06265	439 aa	Known RBP	11.5	□□□□□ -0.57
NEO1-208	ENST00000560328	GAS2L2	Q8NHY3	880 aa		11.5	□□□□□ -0.57
NEO1-208	ENST00000560328	REC8	O95072	547 aa		11.49	□□□□□ -0.57
NEO1-208	ENST00000560328	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
NEO1-208	ENST00000560328	CSPP1	Q1MSJ5	1256 aa		11.49	□□□□□ -0.57
NEO1-208	ENST00000560328	CCDC184	Q52MB2	194 aa		11.49	□□□□□ -0.57
NEO1-208	ENST00000560328	GOLGA6L3	A6NEY3	463 aa		11.49	□□□□□ -0.57
NEO1-208	ENST00000560328	AIMP1	Q12904	312 aa	Known RBP	11.49	□□□□□ -0.57
NEO1-208	ENST00000560328	CHAF1A	Q13111	956 aa	Predicted RBP	11.49	□□□□□ -0.57
NEO1-208	ENST00000560328	ADGRL1	O94910	1474 aa		11.48	□□□□□ -0.57
NEO1-208	ENST00000560328	RUFY2	Q8WXA3	655 aa		11.48	□□□□□ -0.57
NEO1-208	ENST00000560328	NCOA1	Q15788	1441 aa		11.48	□□□□□ -0.57
NEO1-208	ENST00000560328	RIC3	Q7Z5B4	369 aa		11.48	□□□□□ -0.57
NEO1-208	ENST00000560328	SULT6B1	Q6IMI4	303 aa		11.47	□□□□□ -0.57
NEO1-208	ENST00000560328	KIF3A	Q9Y496	699 aa		11.47	□□□□□ -0.57
NEO1-208	ENST00000560328	TSR2	Q969E8	191 aa	Known RBP	11.47	□□□□□ -0.57
NEO1-208	ENST00000560328	ANKLE2	Q86XL3	938 aa		11.47	□□□□□ -0.57
NEO1-208	ENST00000560328	TWISTNB	Q3B726	338 aa	Predicted RBP	11.46	□□□□□ -0.57
NEO1-208	ENST00000560328	PLEKHO1	Q53GL0	409 aa	Predicted RBP	11.46	□□□□□ -0.57
NEO1-208	ENST00000560328	ATAD2	Q6PL18	1390 aa		11.46	□□□□□ -0.57
NEO1-208	ENST00000560328	POGZ	Q7Z3K3	1410 aa		11.46	□□□□□ -0.57
NEO1-208	ENST00000560328	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.46	□□□□□ -0.58
NEO1-208	ENST00000560328	HSP90AB4P	Q58FF6	505 aa		11.46	□□□□□ -0.58
NEO1-208	ENST00000560328	CCDC30	Q5VVM6	783 aa		11.46	□□□□□ -0.58
NEO1-208	ENST00000560328	UBTFL1	P0CB47	393 aa	Predicted RBP	11.46	□□□□□ -0.58
NEO1-208	ENST00000560328	ZKSCAN1	P17029	563 aa	Predicted RBP	11.45	□□□□□ -0.58
NEO1-208	ENST00000560328	DDX11L8	A8MPP1	907 aa		11.45	□□□□□ -0.58
NEO1-208	ENST00000560328	MSH5	O43196	834 aa		11.45	□□□□□ -0.58
NEO1-208	ENST00000560328	BCAR3	O75815	825 aa		11.45	□□□□□ -0.58
NEO1-208	ENST00000560328	MEX3C	Q5U5Q3	659 aa	Known RBP	11.45	□□□□□ -0.58
NEO1-208	ENST00000560328	ANO2	Q9NQ90	1003 aa		11.45	□□□□□ -0.58
NEO1-208	ENST00000560328	C11orf95	C9JLR9	678 aa	Predicted RBP	11.44	□□□□□ -0.58
NEO1-208	ENST00000560328		H3BQV1	296 aa		11.44	□□□□□ -0.58
NEO1-208	ENST00000560328	IFFO2	Q5TF58	517 aa		11.44	□□□□□ -0.58
NEO1-208	ENST00000560328	KIAA2012	Q0VF49	1180 aa		11.44	□□□□□ -0.58
NEO1-208	ENST00000560328	INTS3	Q68E01	1043 aa	Known RBP	11.44	□□□□□ -0.58
NEO1-208	ENST00000560328	USP35	Q9P2H5	1018 aa		11.44	□□□□□ -0.58
NEO1-208	ENST00000560328	CLSTN1	O94985	981 aa		11.44	□□□□□ -0.58
NEO1-208	ENST00000560328	FAM184A	Q8NB25	1140 aa		11.44	□□□□□ -0.58
NEO1-208	ENST00000560328	CCDC34	Q96HJ3	373 aa		11.44	□□□□□ -0.58
NEO1-208	ENST00000560328	WDR63	Q8IWG1	891 aa		11.43	□□□□□ -0.58
NEO1-208	ENST00000560328	NOB1	Q9ULX3	412 aa	Known RBP	11.43	□□□□□ -0.58
NEO1-208	ENST00000560328	FANCI	Q9NVI1	1328 aa		11.43	□□□□□ -0.58
NEO1-208	ENST00000560328	RRS1	Q15050	365 aa	Known RBP	11.43	□□□□□ -0.58
NEO1-208	ENST00000560328	NSD3	Q9BZ95	1437 aa		11.43	□□□□□ -0.58
NEO1-208	ENST00000560328	PDE3A	Q14432	1141 aa		11.43	□□□□□ -0.58
NEO1-208	ENST00000560328	SF3A1	Q15459	793 aa	Known RBP	11.43	□□□□□ -0.58
NEO1-208	ENST00000560328	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.43	□□□□□ -0.58
NEO1-208	ENST00000560328	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.43	□□□□□ -0.58
NEO1-208	ENST00000560328	SMG6	Q86US8	1419 aa	Known RBP	11.43	□□□□□ -0.58
NEO1-208	ENST00000560328	WAPL	Q7Z5K2	1190 aa		11.43	□□□□□ -0.58
NEO1-208	ENST00000560328	NUDT16	Q96DE0	195 aa	Known RBP	11.43	□□□□□ -0.58
NEO1-208	ENST00000560328	THOC2	Q8NI27	1593 aa	Known RBP	11.42	□□□□□ -0.58
NEO1-208	ENST00000560328	ERC2	O15083	957 aa		11.42	□□□□□ -0.58
NEO1-208	ENST00000560328	TPM4	P67936	248 aa		11.42	□□□□□ -0.58
NEO1-208	ENST00000560328	GNAI3	P08754	354 aa		11.42	□□□□□ -0.58
NEO1-208	ENST00000560328	RASSF8	Q8NHQ8	419 aa		11.42	□□□□□ -0.58
NEO1-208	ENST00000560328	CCDC61	Q9Y6R9	512 aa		11.42	□□□□□ -0.58
NEO1-208	ENST00000560328	CHMP4C	Q96CF2	233 aa		11.42	□□□□□ -0.58
NEO1-208	ENST00000560328	ADGRF5	Q8IZF2	1346 aa		11.41	□□□□□ -0.58
NEO1-208	ENST00000560328	PHF14	O94880	888 aa		11.41	□□□□□ -0.58
NEO1-208	ENST00000560328	APP	P05067	770 aa		11.41	□□□□□ -0.58
NEO1-208	ENST00000560328	ATP6V1D	Q9Y5K8	247 aa		11.41	□□□□□ -0.58
NEO1-208	ENST00000560328	DDX49	Q9Y6V7	483 aa	Known RBP	11.41	□□□□□ -0.58
NEO1-208	ENST00000560328	SLC4A2	P04920	1241 aa		11.41	□□□□□ -0.58
NEO1-208	ENST00000560328	FBXO31	Q5XUX0	539 aa	Predicted RBP	11.41	□□□□□ -0.58
NEO1-208	ENST00000560328	C22orf23	Q9BZE7	217 aa		11.41	□□□□□ -0.58
NEO1-208	ENST00000560328	FANCA	O15360	1455 aa		11.41	□□□□□ -0.58
NEO1-208	ENST00000560328	TAT	P17735	454 aa	Predicted RBP	11.4	□□□□□ -0.58
NEO1-208	ENST00000560328	NEUROD6	Q96NK8	337 aa		11.4	□□□□□ -0.58
NEO1-208	ENST00000560328	STRN4	Q9NRL3	753 aa		11.4	□□□□□ -0.58
NEO1-208	ENST00000560328	VPS37D	Q86XT2	251 aa		11.4	□□□□□ -0.58
NEO1-208	ENST00000560328	C1orf115	Q9H7X2	142 aa		11.4	□□□□□ -0.58
NEO1-208	ENST00000560328	GPATCH8	Q9UKJ3	1502 aa	Known RBP	11.4	□□□□□ -0.58
NEO1-208	ENST00000560328	IDI1	Q13907	227 aa		11.4	□□□□□ -0.58
NEO1-208	ENST00000560328	RNF20	Q5VTR2	975 aa		11.4	□□□□□ -0.58
NEO1-208	ENST00000560328	SYNE3	Q6ZMZ3	975 aa		11.4	□□□□□ -0.58
NEO1-208	ENST00000560328	FCHSD2	O94868	740 aa		11.4	□□□□□ -0.59
NEO1-208	ENST00000560328	CDC45	O75419	566 aa		11.39	□□□□□ -0.59
NEO1-208	ENST00000560328	SURF6	O75683	361 aa	Known RBP	11.39	□□□□□ -0.59
NEO1-208	ENST00000560328	PDZRN3	Q9UPQ7	1066 aa		11.39	□□□□□ -0.59
NEO1-208	ENST00000560328	AKAP17A	Q02040	695 aa	Known RBP	11.39	□□□□□ -0.59
NEO1-208	ENST00000560328	HDGFL1	Q5TGJ6	251 aa		11.39	□□□□□ -0.59
NEO1-208	ENST00000560328	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.39	□□□□□ -0.59
NEO1-208	ENST00000560328	RPRD2	Q5VT52	1461 aa	Known RBP	11.39	□□□□□ -0.59
NEO1-208	ENST00000560328	CT47B1	P0C2W7	299 aa	Predicted RBP	11.38	□□□□□ -0.59
NEO1-208	ENST00000560328	MCTP1	Q6DN14	999 aa		11.38	□□□□□ -0.59
NEO1-208	ENST00000560328	SKOR2	Q2VWA4	1001 aa	Predicted RBP	11.38	□□□□□ -0.59
NEO1-208	ENST00000560328	AEBP2	Q6ZN18	517 aa	Predicted RBP	11.38	□□□□□ -0.59
NEO1-208	ENST00000560328	XPC	Q01831	940 aa	Predicted RBP	11.38	□□□□□ -0.59

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