RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 NRXN1Q9ULB1 1477 aa34.11■■■■□ 3.05
CRNDE-209ENST00000560208 MEX3CQ5U5Q3 659 aaKnown RBP34.1■■■■□ 3.05
CRNDE-209ENST00000560208 YTHDC2Q9H6S0 1430 aaKnown RBP34.09■■■■□ 3.05
CRNDE-209ENST00000560208 CDC42BPGQ6DT37 1551 aa34.07■■■■□ 3.05
CRNDE-209ENST00000560208 CFAP70Q5T0N1 1121 aa34.07■■■■□ 3.04
CRNDE-209ENST00000560208 LAMC1P11047 1609 aa34.06■■■■□ 3.04
CRNDE-209ENST00000560208 NUTM2BA6NNL0 878 aaPredicted RBP34.06■■■■□ 3.04
CRNDE-209ENST00000560208 NUTM2EB1AL46 878 aaPredicted RBP34.06■■■■□ 3.04
CRNDE-209ENST00000560208 NUTM2AQ8IVF1 878 aaPredicted RBP34.06■■■■□ 3.04
CRNDE-209ENST00000560208 PLEKHH1Q9ULM0 1364 aa34.04■■■■□ 3.04
CRNDE-209ENST00000560208 TRIM26Q12899 539 aaPredicted RBP34.04■■■■□ 3.04
CRNDE-209ENST00000560208 DHX57Q6P158 1386 aaKnown RBP34.02■■■■□ 3.04
CRNDE-209ENST00000560208 SIRT1Q96EB6 747 aa34.01■■■■□ 3.03
CRNDE-209ENST00000560208 PNPLA6Q8IY17 1366 aa34■■■■□ 3.03
CRNDE-209ENST00000560208 SOS2Q07890 1332 aaPredicted RBP34■■■■□ 3.03
CRNDE-209ENST00000560208 ESCO1Q5FWF5 840 aa33.99■■■■□ 3.03
CRNDE-209ENST00000560208 NUTM2FA1L443 756 aa33.96■■■■□ 3.03
CRNDE-209ENST00000560208 ZNF772Q68DY9 489 aaPredicted RBP33.96■■■■□ 3.03
CRNDE-209ENST00000560208 DCAF11Q8TEB1 546 aa33.96■■■■□ 3.03
CRNDE-209ENST00000560208 KDM2AQ9Y2K7 1162 aa33.96■■■■□ 3.03
CRNDE-209ENST00000560208 FMN2Q9NZ56 1722 aa33.93■■■■□ 3.02
CRNDE-209ENST00000560208 NPHP3Q7Z494 1330 aa33.91■■■■□ 3.02
CRNDE-209ENST00000560208 STAC3Q96MF2 364 aa33.9■■■■□ 3.02
CRNDE-209ENST00000560208 FOXO3O43524 673 aa33.89■■■■□ 3.02
CRNDE-209ENST00000560208 PRAM1Q96QH2 718 aa33.89■■■■□ 3.02
CRNDE-209ENST00000560208 ADGRB1O14514 1584 aa33.87■■■■□ 3.01
CRNDE-209ENST00000560208 SAFB2Q14151 953 aaKnown RBP eCLIP33.87■■■■□ 3.01
CRNDE-209ENST00000560208 AFF2P51816 1311 aa33.86■■■■□ 3.01
CRNDE-209ENST00000560208 DLC1Q96QB1 1528 aa33.86■■■■□ 3.01
CRNDE-209ENST00000560208 POGKQ9P215 609 aa33.85■■■■□ 3.01
CRNDE-209ENST00000560208 C8orf37Q96NL8 207 aa33.84■■■■□ 3.01
CRNDE-209ENST00000560208 PXDNQ92626 1479 aa33.83■■■■□ 3.01
CRNDE-209ENST00000560208 RGPD8O14715 1765 aaPredicted RBP33.83■■■■□ 3.01
CRNDE-209ENST00000560208 XPCQ01831 940 aaPredicted RBP33.83■■■■□ 3.01
CRNDE-209ENST00000560208 ADAMTS2O95450 1211 aa33.82■■■■□ 3
CRNDE-209ENST00000560208 TRAK1Q9UPV9 953 aa33.82■■■■□ 3
CRNDE-209ENST00000560208 KIF1AQ12756 1690 aa33.8■■■■□ 3
CRNDE-209ENST00000560208 COL22A1Q8NFW1 1626 aaPredicted RBP33.79■■■■□ 3
CRNDE-209ENST00000560208 RXRBP28702 533 aa33.77■■■■□ 3
CRNDE-209ENST00000560208 NGLY1Q96IV0 654 aa33.76■■■□□ 2.99
CRNDE-209ENST00000560208 PHF8Q9UPP1 1060 aa33.74■■■□□ 2.99
CRNDE-209ENST00000560208 ADGRB2O60241 1585 aa33.72■■■□□ 2.99
CRNDE-209ENST00000560208 KRT28Q7Z3Y7 464 aa33.71■■■□□ 2.99
CRNDE-209ENST00000560208 QTRT2Q9H974 415 aaKnown RBP33.71■■■□□ 2.99
CRNDE-209ENST00000560208 HIRIP3Q9BW71 556 aaPredicted RBP33.7■■■□□ 2.99
CRNDE-209ENST00000560208 MINK1Q8N4C8 1332 aaPredicted RBP33.69■■■□□ 2.98
CRNDE-209ENST00000560208 SPATA31A3Q5VYP0 1347 aa33.68■■■□□ 2.98
CRNDE-209ENST00000560208 ANKARQ7Z5J8 1434 aa33.67■■■□□ 2.98
CRNDE-209ENST00000560208 USP32Q8NFA0 1604 aa33.67■■■□□ 2.98
CRNDE-209ENST00000560208 CDK12Q9NYV4 1490 aaPredicted RBP33.65■■■□□ 2.98
CRNDE-209ENST00000560208 PCGF6Q9BYE7 350 aa33.65■■■□□ 2.98
CRNDE-209ENST00000560208 ARHGEF28Q8N1W1 1705 aaKnown RBP33.65■■■□□ 2.98
CRNDE-209ENST00000560208 MARF1Q9Y4F3 1742 aaKnown RBP33.65■■■□□ 2.98
CRNDE-209ENST00000560208 PSME1Q06323 249 aa33.64■■■□□ 2.98
CRNDE-209ENST00000560208 KIAA1210Q9ULL0 1709 aa33.63■■■□□ 2.97
CRNDE-209ENST00000560208 RBM6P78332 1123 aaKnown RBP33.63■■■□□ 2.97
CRNDE-209ENST00000560208 FNBP4Q8N3X1 1017 aaPredicted RBP33.63■■■□□ 2.97
CRNDE-209ENST00000560208 USP21Q9UK80 565 aa33.63■■■□□ 2.97
CRNDE-209ENST00000560208 PMFBP1Q8TBY8 1022 aa33.62■■■□□ 2.97
CRNDE-209ENST00000560208 WASLO00401 505 aaPredicted RBP33.61■■■□□ 2.97
CRNDE-209ENST00000560208 EIF3AQ14152 1382 aaKnown RBP33.6■■■□□ 2.97
CRNDE-209ENST00000560208 TNS3Q68CZ2 1445 aa33.58■■■□□ 2.97
CRNDE-209ENST00000560208 PRR36Q9H6K5 1346 aa33.57■■■□□ 2.97
CRNDE-209ENST00000560208 TULP4Q9NRJ4 1543 aa33.57■■■□□ 2.96
CRNDE-209ENST00000560208 SBNO1A3KN83 1393 aa33.57■■■□□ 2.96
CRNDE-209ENST00000560208 TRPC5Q9UL62 973 aaPredicted RBP33.56■■■□□ 2.96
CRNDE-209ENST00000560208 NBPF1Q3BBV0 1214 aa33.54■■■□□ 2.96
CRNDE-209ENST00000560208 LMOD2Q6P5Q4 547 aa33.53■■■□□ 2.96
CRNDE-209ENST00000560208 RGS12O14924 1447 aa33.53■■■□□ 2.96
CRNDE-209ENST00000560208 ATRNO75882 1429 aa33.51■■■□□ 2.95
CRNDE-209ENST00000560208 UPF1Q92900 1129 aaKnown RBP eCLIP33.5■■■□□ 2.95
CRNDE-209ENST00000560208 L3MBTL2Q969R5 705 aa33.5■■■□□ 2.95
CRNDE-209ENST00000560208 SIN3AQ96ST3 1273 aa33.5■■■□□ 2.95
CRNDE-209ENST00000560208 BCL9LQ86UU0 1499 aa33.5■■■□□ 2.95
CRNDE-209ENST00000560208 ARHGEF10O15013 1369 aa33.49■■■□□ 2.95
CRNDE-209ENST00000560208 HAP1P54257 671 aaPredicted RBP33.49■■■□□ 2.95
CRNDE-209ENST00000560208 CABLES1Q8TDN4 633 aa33.49■■■□□ 2.95
CRNDE-209ENST00000560208 GPRASP1Q5JY77 1395 aa33.48■■■□□ 2.95
CRNDE-209ENST00000560208 PLEKHG5O94827 1062 aa33.47■■■□□ 2.95
CRNDE-209ENST00000560208 TRPM3Q9HCF6 1732 aaPredicted RBP33.47■■■□□ 2.95
CRNDE-209ENST00000560208 ITSN1Q15811 1721 aa33.46■■■□□ 2.95
CRNDE-209ENST00000560208 NGDNQ8NEJ9 315 aaKnown RBP33.45■■■□□ 2.95
CRNDE-209ENST00000560208 NUDT16Q96DE0 195 aaKnown RBP33.45■■■□□ 2.95
CRNDE-209ENST00000560208 CDK19Q9BWU1 502 aa33.45■■■□□ 2.95
CRNDE-209ENST00000560208 NEUROD1Q13562 356 aa33.44■■■□□ 2.94
CRNDE-209ENST00000560208 ATP7BP35670 1465 aa33.44■■■□□ 2.94
CRNDE-209ENST00000560208 ABCA3Q99758 1704 aa33.43■■■□□ 2.94
CRNDE-209ENST00000560208 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.42■■■□□ 2.94
CRNDE-209ENST00000560208 SLIT2O94813 1529 aa33.42■■■□□ 2.94
CRNDE-209ENST00000560208 UNC5CLQ8IV45 518 aa33.41■■■□□ 2.94
CRNDE-209ENST00000560208 ALS2Q96Q42 1657 aa33.4■■■□□ 2.94
CRNDE-209ENST00000560208 GJD4Q96KN9 370 aaPredicted RBP33.38■■■□□ 2.93
CRNDE-209ENST00000560208 CENPJQ9HC77 1338 aaPredicted RBP33.36■■■□□ 2.93
CRNDE-209ENST00000560208 PAK3O75914 559 aaPredicted RBP33.35■■■□□ 2.93
CRNDE-209ENST00000560208 CCDC61Q9Y6R9 512 aa33.34■■■□□ 2.93
CRNDE-209ENST00000560208 PLCH1Q4KWH8 1693 aa33.33■■■□□ 2.93
CRNDE-209ENST00000560208 TRPM1Q7Z4N2 1603 aa33.33■■■□□ 2.93
CRNDE-209ENST00000560208 TOPAZ1Q8N9V7 1692 aa33.33■■■□□ 2.93
CRNDE-209ENST00000560208 NWD2Q9ULI1 1742 aa33.31■■■□□ 2.92
CRNDE-209ENST00000560208 QRICH2Q9H0J4 1663 aa33.3■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms