RNA–Protein interactions for RNA: ENST00000560080.1

RNF111-209, Transcript of ring finger protein 111, humanhuman

TSL 3

Gene RNF111, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-209ENST00000560080 AXIN1O15169 862 aa12.88□□□□□ -0.35
RNF111-209ENST00000560080 MAP2K5Q13163 448 aa12.86□□□□□ -0.35
RNF111-209ENST00000560080 CD46P15529 392 aa12.85□□□□□ -0.35
RNF111-209ENST00000560080 KDM4AO75164 1064 aa12.84□□□□□ -0.35
RNF111-209ENST00000560080 MMP16P51512 607 aa12.83□□□□□ -0.36
RNF111-209ENST00000560080 WNT7AO00755 349 aa12.82□□□□□ -0.36
RNF111-209ENST00000560080 USP46P62068 366 aa12.82□□□□□ -0.36
RNF111-209ENST00000560080 USB1Q9BQ65 265 aaKnown RBP12.82□□□□□ -0.36
RNF111-209ENST00000560080 SMCPP49901 116 aaPredicted RBP12.81□□□□□ -0.36
RNF111-209ENST00000560080 TRIM32Q13049 653 aa12.81□□□□□ -0.36
RNF111-209ENST00000560080 TREML4Q6UXN2 200 aa12.81□□□□□ -0.36
RNF111-209ENST00000560080 SNIP1Q8TAD8 396 aaKnown RBP12.81□□□□□ -0.36
RNF111-209ENST00000560080 IRF6O14896 467 aa12.8□□□□□ -0.36
RNF111-209ENST00000560080 C11orf95C9JLR9 678 aaPredicted RBP12.79□□□□□ -0.36
RNF111-209ENST00000560080 REPIN1Q9BWE0 567 aaKnown RBP12.78□□□□□ -0.36
RNF111-209ENST00000560080 DACH1Q9UI36 760 aa12.78□□□□□ -0.36
RNF111-209ENST00000560080 MINK1Q8N4C8 1332 aaPredicted RBP12.78□□□□□ -0.36
RNF111-209ENST00000560080 DXOO77932 396 aaKnown RBP12.77□□□□□ -0.37
RNF111-209ENST00000560080 MDM2Q00987 491 aaPredicted RBP12.77□□□□□ -0.37
RNF111-209ENST00000560080 GMPR2Q9P2T1 348 aaKnown RBP12.77□□□□□ -0.37
RNF111-209ENST00000560080 CCDC24Q8N4L8 307 aa12.75□□□□□ -0.37
RNF111-209ENST00000560080 MRGPRX2Q96LB1 330 aa12.74□□□□□ -0.37
RNF111-209ENST00000560080 KDM2AQ9Y2K7 1162 aa12.74□□□□□ -0.37
RNF111-209ENST00000560080 SMPD1P17405 629 aa12.73□□□□□ -0.37
RNF111-209ENST00000560080 HOXA2O43364 376 aa12.72□□□□□ -0.37
RNF111-209ENST00000560080 KRI1Q8N9T8 703 aaKnown RBP12.72□□□□□ -0.37
RNF111-209ENST00000560080 CLCN1P35523 988 aa12.71□□□□□ -0.37
RNF111-209ENST00000560080 GPCPD1Q9NPB8 672 aa12.71□□□□□ -0.37
RNF111-209ENST00000560080 WFS1O76024 890 aa12.7□□□□□ -0.38
RNF111-209ENST00000560080 WNT7BP56706 349 aa12.7□□□□□ -0.38
RNF111-209ENST00000560080 CCDC102AQ96A19 550 aa12.69□□□□□ -0.38
RNF111-209ENST00000560080 SENP2Q9HC62 589 aa12.69□□□□□ -0.38
RNF111-209ENST00000560080 LCE2AQ5TA79 106 aaPredicted RBP12.68□□□□□ -0.38
RNF111-209ENST00000560080 NUTM1Q86Y26 1132 aa12.68□□□□□ -0.38
RNF111-209ENST00000560080 HLA-CQ95604 372 aa12.68□□□□□ -0.38
RNF111-209ENST00000560080 ATP13A2Q9NQ11 1180 aa12.68□□□□□ -0.38
RNF111-209ENST00000560080 J3QL48 77 aa12.67□□□□□ -0.38
RNF111-209ENST00000560080 RC3H1Q5TC82 1133 aaKnown RBP12.67□□□□□ -0.38
RNF111-209ENST00000560080 JUNDP17535 347 aa12.66□□□□□ -0.38
RNF111-209ENST00000560080 VSIG10Q8N0Z9 540 aa12.66□□□□□ -0.38
RNF111-209ENST00000560080 FAM217BQ9NTX9 383 aaPredicted RBP12.65□□□□□ -0.38
RNF111-209ENST00000560080 RETREG3Q86VR2 466 aa12.63□□□□□ -0.39
RNF111-209ENST00000560080 GUCA2AQ02747 115 aa12.62□□□□□ -0.39
RNF111-209ENST00000560080 HPS1Q92902 700 aa12.62□□□□□ -0.39
RNF111-209ENST00000560080 KIFC2Q96AC6 838 aa12.62□□□□□ -0.39
RNF111-209ENST00000560080 SKOR1P84550 965 aa12.61□□□□□ -0.39
RNF111-209ENST00000560080 TRIM47Q96LD4 638 aa12.61□□□□□ -0.39
RNF111-209ENST00000560080 NUDT12Q9BQG2 462 aa12.61□□□□□ -0.39
RNF111-209ENST00000560080 ALDH1A1P00352 501 aa12.59□□□□□ -0.39
RNF111-209ENST00000560080 SYMPKQ92797 1274 aaKnown RBP12.59□□□□□ -0.39
RNF111-209ENST00000560080 FDX1P10109 184 aa12.58□□□□□ -0.4
RNF111-209ENST00000560080 NFX1Q12986 1120 aaKnown RBP12.58□□□□□ -0.4
RNF111-209ENST00000560080 C6orf229H3BNL8 230 aa12.57□□□□□ -0.4
RNF111-209ENST00000560080 SNRPBP14678 240 aaKnown RBP12.57□□□□□ -0.4
RNF111-209ENST00000560080 EHBP1Q8NDI1 1231 aa12.57□□□□□ -0.4
RNF111-209ENST00000560080 INSM1Q01101 510 aaPredicted RBP12.56□□□□□ -0.4
RNF111-209ENST00000560080 TERTO14746 1132 aaKnown RBP12.54□□□□□ -0.4
RNF111-209ENST00000560080 WIPF1O43516 503 aa12.54□□□□□ -0.4
RNF111-209ENST00000560080 MS4A1P11836 297 aa12.54□□□□□ -0.4
RNF111-209ENST00000560080 WASF2Q9Y6W5 498 aa12.54□□□□□ -0.4
RNF111-209ENST00000560080 CCNYL3P0C7X3 344 aa12.53□□□□□ -0.4
RNF111-209ENST00000560080 STK17AQ9UEE5 414 aa12.53□□□□□ -0.4
RNF111-209ENST00000560080 SSTR3P32745 418 aaPredicted RBP12.52□□□□□ -0.41
RNF111-209ENST00000560080 PTCRAQ6ISU1 281 aaPredicted RBP12.52□□□□□ -0.41
RNF111-209ENST00000560080 SIAH2O43255 324 aa12.5□□□□□ -0.41
RNF111-209ENST00000560080 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.5□□□□□ -0.41
RNF111-209ENST00000560080 PCDHGC3Q9UN70 934 aa12.5□□□□□ -0.41
RNF111-209ENST00000560080 PTPRNQ16849 979 aa12.49□□□□□ -0.41
RNF111-209ENST00000560080 TTLL12Q14166 644 aaPredicted RBP12.48□□□□□ -0.41
RNF111-209ENST00000560080 SLC16A10Q8TF71 515 aa12.48□□□□□ -0.41
RNF111-209ENST00000560080 SPIRE2Q8WWL2 714 aa12.48□□□□□ -0.41
RNF111-209ENST00000560080 SPDYE5A6NIY4 337 aa12.47□□□□□ -0.41
RNF111-209ENST00000560080 CAPN5O15484 640 aaPredicted RBP12.47□□□□□ -0.41
RNF111-209ENST00000560080 SH3BP2P78314 561 aa12.47□□□□□ -0.41
RNF111-209ENST00000560080 UNC93B1Q9H1C4 597 aa12.46□□□□□ -0.41
RNF111-209ENST00000560080 EVA1BQ9NVM1 165 aa12.46□□□□□ -0.41
RNF111-209ENST00000560080 PLEKHG3A1L390 1219 aa12.44□□□□□ -0.42
RNF111-209ENST00000560080 KCNH2Q12809 1159 aa12.44□□□□□ -0.42
RNF111-209ENST00000560080 MTMR2Q13614 643 aa12.44□□□□□ -0.42
RNF111-209ENST00000560080 PRR7Q8TB68 274 aa12.44□□□□□ -0.42
RNF111-209ENST00000560080 MOXD2PA6NHM9 499 aa12.43□□□□□ -0.42
RNF111-209ENST00000560080 NDUFV2P19404 249 aa12.43□□□□□ -0.42
RNF111-209ENST00000560080 DESI1Q6ICB0 168 aa12.43□□□□□ -0.42
RNF111-209ENST00000560080 DIXDC1Q155Q3 683 aa12.42□□□□□ -0.42
RNF111-209ENST00000560080 NXF1Q9UBU9 619 aaKnown RBP12.42□□□□□ -0.42
RNF111-209ENST00000560080 BARGINQ6ZT62 677 aa12.41□□□□□ -0.42
RNF111-209ENST00000560080 BAP1Q92560 729 aa12.41□□□□□ -0.42
RNF111-209ENST00000560080 BMP1P13497 986 aa12.4□□□□□ -0.42
RNF111-209ENST00000560080 VARSP26640 1264 aaKnown RBP12.4□□□□□ -0.42
RNF111-209ENST00000560080 AMHR2Q16671 573 aa12.4□□□□□ -0.42
RNF111-209ENST00000560080 LINC01559Q495D7 138 aa12.4□□□□□ -0.42
RNF111-209ENST00000560080 NPAS3Q8IXF0 933 aa12.39□□□□□ -0.43
RNF111-209ENST00000560080 ZNF511Q8NB15 262 aa12.39□□□□□ -0.43
RNF111-209ENST00000560080 GJA5P36382 358 aa12.38□□□□□ -0.43
RNF111-209ENST00000560080 GIGYF2Q6Y7W6 1299 aaKnown RBP12.38□□□□□ -0.43
RNF111-209ENST00000560080 TRIM46Q7Z4K8 759 aa12.38□□□□□ -0.43
RNF111-209ENST00000560080 MPNDQ8N594 471 aa12.38□□□□□ -0.43
RNF111-209ENST00000560080 FAM181BA6NEQ2 426 aa12.37□□□□□ -0.43
RNF111-209ENST00000560080 ZMYND10O75800 440 aa12.37□□□□□ -0.43
RNF111-209ENST00000560080 BEGAINQ9BUH8 593 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms