RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 PTPRMP28827 1452 aa10.7□□□□□ -0.7
SMAD3-212ENST00000559937 ANKRD36BQ8N2N9 1353 aa10.7□□□□□ -0.7
SMAD3-212ENST00000559937 CCDC136Q96JN2 1154 aa10.7□□□□□ -0.7
SMAD3-212ENST00000559937 CARD14Q9BXL6 1004 aa10.7□□□□□ -0.7
SMAD3-212ENST00000559937 TRAK1Q9UPV9 953 aa10.7□□□□□ -0.7
SMAD3-212ENST00000559937 KIF20BQ96Q89 1820 aa10.7□□□□□ -0.7
SMAD3-212ENST00000559937 KNDC1Q76NI1 1749 aa10.7□□□□□ -0.7
SMAD3-212ENST00000559937 PLEKHH1Q9ULM0 1364 aa10.69□□□□□ -0.7
SMAD3-212ENST00000559937 MED14O60244 1454 aa10.68□□□□□ -0.7
SMAD3-212ENST00000559937 CGNL1Q0VF96 1302 aa10.67□□□□□ -0.7
SMAD3-212ENST00000559937 GOLGA2Q08379 1002 aa10.67□□□□□ -0.7
SMAD3-212ENST00000559937 YTHDC2Q9H6S0 1430 aaKnown RBP10.67□□□□□ -0.7
SMAD3-212ENST00000559937 ATAD2Q6PL18 1390 aa10.66□□□□□ -0.7
SMAD3-212ENST00000559937 NCBP3Q53F19 620 aaKnown RBP10.66□□□□□ -0.7
SMAD3-212ENST00000559937 TMEM132EQ6IEE7 984 aa10.66□□□□□ -0.7
SMAD3-212ENST00000559937 TRMT2AQ8IZ69 625 aaKnown RBP10.66□□□□□ -0.7
SMAD3-212ENST00000559937 CDCA7LQ96GN5 454 aa10.66□□□□□ -0.7
SMAD3-212ENST00000559937 A2ML1A8K2U0 1454 aa10.66□□□□□ -0.7
SMAD3-212ENST00000559937 DUSP27Q5VZP5 1158 aa10.65□□□□□ -0.7
SMAD3-212ENST00000559937 MORC1Q86VD1 984 aa10.65□□□□□ -0.7
SMAD3-212ENST00000559937 SALL2Q9Y467 1007 aaPredicted RBP10.65□□□□□ -0.7
SMAD3-212ENST00000559937 IQSEC2Q5JU85 1478 aa10.65□□□□□ -0.7
SMAD3-212ENST00000559937 ADGRB2O60241 1585 aa10.65□□□□□ -0.71
SMAD3-212ENST00000559937 ABCC11Q96J66 1382 aa10.65□□□□□ -0.71
SMAD3-212ENST00000559937 NKTRP30414 1462 aaKnown RBP10.64□□□□□ -0.71
SMAD3-212ENST00000559937 SLFN5Q08AF3 891 aa10.64□□□□□ -0.71
SMAD3-212ENST00000559937 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.64□□□□□ -0.71
SMAD3-212ENST00000559937 NRXN3Q9Y4C0 1643 aa10.64□□□□□ -0.71
SMAD3-212ENST00000559937 EXOC6Q8TAG9 804 aa10.63□□□□□ -0.71
SMAD3-212ENST00000559937 CFAP53Q96M91 514 aa10.63□□□□□ -0.71
SMAD3-212ENST00000559937 SLC12A5Q9H2X9 1139 aa10.63□□□□□ -0.71
SMAD3-212ENST00000559937 RIMS2Q9UQ26 1411 aa10.63□□□□□ -0.71
SMAD3-212ENST00000559937 ADAMTSL3P82987 1691 aa10.63□□□□□ -0.71
SMAD3-212ENST00000559937 SENP3-EIF4A1A0A087X0R7 540 aa10.62□□□□□ -0.71
SMAD3-212ENST00000559937 E9PSI1 815 aa10.62□□□□□ -0.71
SMAD3-212ENST00000559937 ATP7BP35670 1465 aa10.61□□□□□ -0.71
SMAD3-212ENST00000559937 UBR1Q8IWV7 1749 aa10.61□□□□□ -0.71
SMAD3-212ENST00000559937 CD163L1Q9NR16 1453 aa10.61□□□□□ -0.71
SMAD3-212ENST00000559937 CDC42BPGQ6DT37 1551 aa10.6□□□□□ -0.71
SMAD3-212ENST00000559937 CPS1P31327 1500 aa10.6□□□□□ -0.71
SMAD3-212ENST00000559937 TCERG1O14776 1098 aaKnown RBP10.6□□□□□ -0.71
SMAD3-212ENST00000559937 FBXO31Q5XUX0 539 aaPredicted RBP10.6□□□□□ -0.71
SMAD3-212ENST00000559937 RUNDC1Q96C34 613 aa10.6□□□□□ -0.71
SMAD3-212ENST00000559937 ANP32EQ9BTT0 268 aa10.6□□□□□ -0.71
SMAD3-212ENST00000559937 A0A1W2PP64 1363 aa10.6□□□□□ -0.71
SMAD3-212ENST00000559937 AKAP12Q02952 1782 aa10.6□□□□□ -0.71
SMAD3-212ENST00000559937 ITSN1Q15811 1721 aa10.59□□□□□ -0.71
SMAD3-212ENST00000559937 MON2Q7Z3U7 1717 aa10.59□□□□□ -0.71
SMAD3-212ENST00000559937 APAF1O14727 1248 aa10.59□□□□□ -0.71
SMAD3-212ENST00000559937 CCDC27Q2M243 656 aa10.59□□□□□ -0.71
SMAD3-212ENST00000559937 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.59□□□□□ -0.71
SMAD3-212ENST00000559937 TERF2IPQ9NYB0 399 aa10.59□□□□□ -0.71
SMAD3-212ENST00000559937 COL3A1P02461 1466 aaPredicted RBP10.59□□□□□ -0.71
SMAD3-212ENST00000559937 NLRP1Q9C000 1473 aa10.59□□□□□ -0.71
SMAD3-212ENST00000559937 MS4A1P11836 297 aa10.58□□□□□ -0.72
SMAD3-212ENST00000559937 NUTM2DQ5VT03 806 aaPredicted RBP10.58□□□□□ -0.72
SMAD3-212ENST00000559937 PHF23Q9BUL5 403 aaPredicted RBP10.58□□□□□ -0.72
SMAD3-212ENST00000559937 STAG3Q9UJ98 1225 aa10.58□□□□□ -0.72
SMAD3-212ENST00000559937 TECPR2O15040 1411 aa10.58□□□□□ -0.72
SMAD3-212ENST00000559937 CCDC146Q8IYE0 955 aa10.57□□□□□ -0.72
SMAD3-212ENST00000559937 PRAM1Q96QH2 718 aa10.57□□□□□ -0.72
SMAD3-212ENST00000559937 CRBNQ96SW2 442 aa10.57□□□□□ -0.72
SMAD3-212ENST00000559937 CABP2Q9NPB3 220 aa10.57□□□□□ -0.72
SMAD3-212ENST00000559937 POGKQ9P215 609 aa10.57□□□□□ -0.72
SMAD3-212ENST00000559937 FAM135BQ49AJ0 1406 aa10.57□□□□□ -0.72
SMAD3-212ENST00000559937 VIRMAQ69YN4 1812 aaKnown RBP10.56□□□□□ -0.72
SMAD3-212ENST00000559937 MTHFSP49914 203 aa10.56□□□□□ -0.72
SMAD3-212ENST00000559937 SRPK2P78362 688 aaKnown RBP10.56□□□□□ -0.72
SMAD3-212ENST00000559937 MLECQ14165 292 aa10.56□□□□□ -0.72
SMAD3-212ENST00000559937 HDGFL2Q7Z4V5 671 aaPredicted RBP10.56□□□□□ -0.72
SMAD3-212ENST00000559937 WDR63Q8IWG1 891 aa10.56□□□□□ -0.72
SMAD3-212ENST00000559937 SIRT1Q96EB6 747 aa10.56□□□□□ -0.72
SMAD3-212ENST00000559937 MAP2P11137 1827 aaKnown RBP10.56□□□□□ -0.72
SMAD3-212ENST00000559937 HDGFP51858 240 aaKnown RBP10.55□□□□□ -0.72
SMAD3-212ENST00000559937 WWC1Q8IX03 1113 aa10.55□□□□□ -0.72
SMAD3-212ENST00000559937 STK26Q9P289 416 aa10.55□□□□□ -0.72
SMAD3-212ENST00000559937 MINK1Q8N4C8 1332 aaPredicted RBP10.55□□□□□ -0.72
SMAD3-212ENST00000559937 ZMYM3Q14202 1370 aa10.54□□□□□ -0.72
SMAD3-212ENST00000559937 TNRQ92752 1358 aa10.54□□□□□ -0.72
SMAD3-212ENST00000559937 PLIN1O60240 522 aa10.54□□□□□ -0.72
SMAD3-212ENST00000559937 C3P01024 1663 aa10.53□□□□□ -0.72
SMAD3-212ENST00000559937 TOPAZ1Q8N9V7 1692 aa10.53□□□□□ -0.72
SMAD3-212ENST00000559937 AAMPQ13685 434 aa10.53□□□□□ -0.72
SMAD3-212ENST00000559937 PDE3AQ14432 1141 aa10.53□□□□□ -0.72
SMAD3-212ENST00000559937 CENPQQ7L2Z9 268 aaPredicted RBP10.53□□□□□ -0.72
SMAD3-212ENST00000559937 CDK19Q9BWU1 502 aa10.53□□□□□ -0.72
SMAD3-212ENST00000559937 ESF1Q9H501 851 aaKnown RBP10.53□□□□□ -0.72
SMAD3-212ENST00000559937 KDM2BQ8NHM5 1336 aa10.53□□□□□ -0.72
SMAD3-212ENST00000559937 PNPLA6Q8IY17 1366 aa10.52□□□□□ -0.72
SMAD3-212ENST00000559937 EDC4Q6P2E9 1401 aaKnown RBP10.52□□□□□ -0.73
SMAD3-212ENST00000559937 MSH5O43196 834 aa10.52□□□□□ -0.73
SMAD3-212ENST00000559937 CT47B1P0C2W7 299 aaPredicted RBP10.52□□□□□ -0.73
SMAD3-212ENST00000559937 TCP11L2Q8N4U5 519 aa10.52□□□□□ -0.73
SMAD3-212ENST00000559937 SPINK5Q9NQ38 1064 aaPredicted RBP10.52□□□□□ -0.73
SMAD3-212ENST00000559937 RIMS1Q86UR5 1692 aaKnown RBP10.52□□□□□ -0.73
SMAD3-212ENST00000559937 CPSF1Q10570 1443 aaKnown RBP10.51□□□□□ -0.73
SMAD3-212ENST00000559937 FYB1O15117 783 aa10.51□□□□□ -0.73
SMAD3-212ENST00000559937 SAFB2Q14151 953 aaKnown RBP eCLIP10.51□□□□□ -0.73
SMAD3-212ENST00000559937 PLPPR3Q6T4P5 718 aa10.51□□□□□ -0.73
SMAD3-212ENST00000559937 PNNQ9H307 717 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms