RNA–Protein interactions for RNA: ENST00000559934.5

PSMA4-215, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 2,741 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-215ENST00000559934 MORC1Q86VD1 984 aa27.79■■■□□ 2.04
PSMA4-215ENST00000559934 ZMYM3Q14202 1370 aa27.79■■■□□ 2.04
PSMA4-215ENST00000559934 EFCAB2Q5VUJ9 269 aa27.78■■■□□ 2.04
PSMA4-215ENST00000559934 PLCH2O75038 1416 aa27.78■■■□□ 2.04
PSMA4-215ENST00000559934 ABCC1P33527 1531 aa27.78■■■□□ 2.04
PSMA4-215ENST00000559934 AAMPQ13685 434 aa27.77■■■□□ 2.04
PSMA4-215ENST00000559934 PHF23Q9BUL5 403 aaPredicted RBP27.77■■■□□ 2.04
PSMA4-215ENST00000559934 NSD3Q9BZ95 1437 aa27.77■■■□□ 2.04
PSMA4-215ENST00000559934 MFAP1P55081 439 aaKnown RBP27.76■■■□□ 2.04
PSMA4-215ENST00000559934 AFAP1Q8N556 730 aa27.76■■■□□ 2.04
PSMA4-215ENST00000559934 UGGT1Q9NYU2 1555 aa27.76■■■□□ 2.04
PSMA4-215ENST00000559934 SPAG9O60271 1321 aaKnown RBP27.76■■■□□ 2.03
PSMA4-215ENST00000559934 RTEL1-TNFRSF6BF6WH68 1400 aa27.76■■■□□ 2.03
PSMA4-215ENST00000559934 C22orf23Q9BZE7 217 aa27.75■■■□□ 2.03
PSMA4-215ENST00000559934 MAP3K4Q9Y6R4 1608 aa27.74■■■□□ 2.03
PSMA4-215ENST00000559934 WDR63Q8IWG1 891 aa27.74■■■□□ 2.03
PSMA4-215ENST00000559934 MVPQ14764 893 aaKnown RBP27.73■■■□□ 2.03
PSMA4-215ENST00000559934 SHROOM2Q13796 1616 aa27.72■■■□□ 2.03
PSMA4-215ENST00000559934 TET3O43151 1660 aa27.72■■■□□ 2.03
PSMA4-215ENST00000559934 TRAK2O60296 914 aa27.71■■■□□ 2.03
PSMA4-215ENST00000559934 SLC12A5Q9H2X9 1139 aa27.71■■■□□ 2.03
PSMA4-215ENST00000559934 CHMP5Q9NZZ3 219 aa27.71■■■□□ 2.03
PSMA4-215ENST00000559934 ERCC6L2Q5T890 1561 aa27.69■■■□□ 2.02
PSMA4-215ENST00000559934 SLC24A1O60721 1099 aa27.69■■■□□ 2.02
PSMA4-215ENST00000559934 MTHFSP49914 203 aa27.69■■■□□ 2.02
PSMA4-215ENST00000559934 DEPDC5O75140 1603 aa27.68■■■□□ 2.02
PSMA4-215ENST00000559934 ZFYVE16Q7Z3T8 1539 aa27.68■■■□□ 2.02
PSMA4-215ENST00000559934 FTSJ3Q8IY81 847 aaKnown RBP27.68■■■□□ 2.02
PSMA4-215ENST00000559934 NAP1L5Q96NT1 182 aaPredicted RBP27.67■■■□□ 2.02
PSMA4-215ENST00000559934 DZIP1LQ8IYY4 767 aaKnown RBP27.66■■■□□ 2.02
PSMA4-215ENST00000559934 MYOM2P54296 1465 aa27.66■■■□□ 2.02
PSMA4-215ENST00000559934 ZKSCAN2Q63HK3 967 aa27.66■■■□□ 2.02
PSMA4-215ENST00000559934 TSR2Q969E8 191 aaKnown RBP27.65■■■□□ 2.02
PSMA4-215ENST00000559934 PNNQ9H307 717 aaKnown RBP27.65■■■□□ 2.02
PSMA4-215ENST00000559934 MYH16Q9H6N6 1097 aa27.64■■■□□ 2.02
PSMA4-215ENST00000559934 CCDC27Q2M243 656 aa27.63■■■□□ 2.01
PSMA4-215ENST00000559934 ZNF518AQ6AHZ1 1483 aa27.63■■■□□ 2.01
PSMA4-215ENST00000559934 MYO3AQ8NEV4 1616 aa27.63■■■□□ 2.01
PSMA4-215ENST00000559934 KIF3BO15066 747 aa27.63■■■□□ 2.01
PSMA4-215ENST00000559934 CLCN1P35523 988 aa27.63■■■□□ 2.01
PSMA4-215ENST00000559934 TRAK1Q9UPV9 953 aa27.63■■■□□ 2.01
PSMA4-215ENST00000559934 KANK1Q14678 1352 aa27.62■■■□□ 2.01
PSMA4-215ENST00000559934 ZNF692Q9BU19 519 aaPredicted RBP27.62■■■□□ 2.01
PSMA4-215ENST00000559934 SBNO2Q9Y2G9 1366 aa27.61■■■□□ 2.01
PSMA4-215ENST00000559934 MROH2AA6NES4 1674 aa27.6■■■□□ 2.01
PSMA4-215ENST00000559934 HSCBQ8IWL3 235 aa27.6■■■□□ 2.01
PSMA4-215ENST00000559934 CHD1O14646 1710 aa27.6■■■□□ 2.01
PSMA4-215ENST00000559934 U2AF1L5P0DN76 240 aaPredicted RBP27.6■■■□□ 2.01
PSMA4-215ENST00000559934 U2AF1Q01081 240 aaKnown RBP eCLIP27.6■■■□□ 2.01
PSMA4-215ENST00000559934 MRE11P49959 708 aa27.59■■■□□ 2.01
PSMA4-215ENST00000559934 SMC4Q9NTJ3 1288 aa27.59■■■□□ 2.01
PSMA4-215ENST00000559934 KIF1BO60333 1816 aa27.59■■■□□ 2.01
PSMA4-215ENST00000559934 IFT172Q9UG01 1749 aa27.59■■■□□ 2.01
PSMA4-215ENST00000559934 TRIM27P14373 513 aa27.59■■■□□ 2.01
PSMA4-215ENST00000559934 VWDEQ8N2E2 1590 aa27.59■■■□□ 2.01
PSMA4-215ENST00000559934 CFAP53Q96M91 514 aa27.58■■■□□ 2.01
PSMA4-215ENST00000559934 ZCCHC11Q5TAX3 1644 aaKnown RBP27.58■■■□□ 2.01
PSMA4-215ENST00000559934 ITPRIPQ8IWB1 547 aa27.58■■■□□ 2.01
PSMA4-215ENST00000559934 GRPEL1Q9HAV7 217 aa27.57■■■□□ 2
PSMA4-215ENST00000559934 NEURL4Q96JN8 1562 aa27.56■■■□□ 2
PSMA4-215ENST00000559934 EXOSC9Q06265 439 aaKnown RBP27.56■■■□□ 2
PSMA4-215ENST00000559934 HDAC1Q13547 482 aaPredicted RBP27.55■■■□□ 2
PSMA4-215ENST00000559934 NOS1P29475 1434 aa27.55■■■□□ 2
PSMA4-215ENST00000559934 DDX11L8A8MPP1 907 aa27.54■■■□□ 2
PSMA4-215ENST00000559934 SSH1Q8WYL5 1049 aa27.54■■■□□ 2
PSMA4-215ENST00000559934 QRICH2Q9H0J4 1663 aa27.53■■■□□ 2
PSMA4-215ENST00000559934 CHGAP10645 457 aaKnown RBP27.53■■■□□ 2
PSMA4-215ENST00000559934 ERBB4Q15303 1308 aa27.52■■■□□ 2
PSMA4-215ENST00000559934 TMEM132EQ6IEE7 984 aa27.52■■■□□ 2
PSMA4-215ENST00000559934 ZC3H13Q5T200 1668 aaKnown RBP27.52■■■□□ 2
PSMA4-215ENST00000559934 NRXN1Q9ULB1 1477 aa27.52■■■□□ 2
PSMA4-215ENST00000559934 DDIT3P35638 169 aa27.52■■■□□ 2
PSMA4-215ENST00000559934 NCOA3Q9Y6Q9 1424 aa27.51■■□□□ 1.99
PSMA4-215ENST00000559934 SMC5Q8IY18 1101 aa27.51■■□□□ 1.99
PSMA4-215ENST00000559934 ATP7AQ04656 1500 aa27.5■■□□□ 1.99
PSMA4-215ENST00000559934 DDX19BQ9UMR2 479 aa27.5■■□□□ 1.99
PSMA4-215ENST00000559934 MROH1Q8NDA8 1641 aa27.5■■□□□ 1.99
PSMA4-215ENST00000559934 ADGRB2O60241 1585 aa27.49■■□□□ 1.99
PSMA4-215ENST00000559934 TNPO1Q92973 898 aaKnown RBP27.49■■□□□ 1.99
PSMA4-215ENST00000559934 NOB1Q9ULX3 412 aaKnown RBP27.49■■□□□ 1.99
PSMA4-215ENST00000559934 ATF7IPQ6VMQ6 1270 aa27.49■■□□□ 1.99
PSMA4-215ENST00000559934 TMEM57Q8N5G2 664 aa27.49■■□□□ 1.99
PSMA4-215ENST00000559934 GAS2L3Q86XJ1 694 aa27.48■■□□□ 1.99
PSMA4-215ENST00000559934 USP32Q8NFA0 1604 aa27.47■■□□□ 1.99
PSMA4-215ENST00000559934 ESPNB1AK53 854 aa27.47■■□□□ 1.99
PSMA4-215ENST00000559934 LNPKQ9C0E8 428 aa27.46■■□□□ 1.99
PSMA4-215ENST00000559934 CD109Q6YHK3 1445 aa27.46■■□□□ 1.99
PSMA4-215ENST00000559934 INO80Q9ULG1 1556 aaPredicted RBP27.46■■□□□ 1.99
PSMA4-215ENST00000559934 RBM25P49756 843 aaKnown RBP27.46■■□□□ 1.99
PSMA4-215ENST00000559934 SETBP1Q9Y6X0 1596 aa27.45■■□□□ 1.98
PSMA4-215ENST00000559934 CT47B1P0C2W7 299 aaPredicted RBP27.45■■□□□ 1.98
PSMA4-215ENST00000559934 U2SURPO15042 1029 aaKnown RBP27.44■■□□□ 1.98
PSMA4-215ENST00000559934 HSP90AA1P07900 732 aaKnown RBP27.44■■□□□ 1.98
PSMA4-215ENST00000559934 TRIM35Q9UPQ4 493 aa27.44■■□□□ 1.98
PSMA4-215ENST00000559934 ZBTB40Q9NUA8 1239 aa27.44■■□□□ 1.98
PSMA4-215ENST00000559934 EFCAB6Q5THR3 1501 aa27.43■■□□□ 1.98
PSMA4-215ENST00000559934 FOXD4L1Q9NU39 408 aa27.43■■□□□ 1.98
PSMA4-215ENST00000559934 HSP90AB1P08238 724 aaKnown RBP27.43■■□□□ 1.98
PSMA4-215ENST00000559934 SNX21Q969T3 373 aa27.43■■□□□ 1.98
PSMA4-215ENST00000559934 TMPOP42166 694 aaKnown RBP27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms