RNA–Protein interactions for RNA: ENST00000559858.5

ZEB1-217, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 2,745 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-217ENST00000559858 PRDM15P57071 1507 aaPredicted RBP8.27□□□□□ -1.08
ZEB1-217ENST00000559858 LETM1O95202 739 aaPredicted RBP8.27□□□□□ -1.09
ZEB1-217ENST00000559858 CCDC39Q9UFE4 941 aa8.27□□□□□ -1.09
ZEB1-217ENST00000559858 DMRT2Q9Y5R5 561 aa8.27□□□□□ -1.09
ZEB1-217ENST00000559858 EIF4G3O43432 1585 aaKnown RBP8.27□□□□□ -1.09
ZEB1-217ENST00000559858 RLBP1P12271 317 aa8.26□□□□□ -1.09
ZEB1-217ENST00000559858 GTF2E1P29083 439 aaPredicted RBP8.26□□□□□ -1.09
ZEB1-217ENST00000559858 MAGI2Q86UL8 1455 aa8.26□□□□□ -1.09
ZEB1-217ENST00000559858 ARHGAP31Q2M1Z3 1444 aa8.26□□□□□ -1.09
ZEB1-217ENST00000559858 BAG4O95429 457 aaKnown RBP8.26□□□□□ -1.09
ZEB1-217ENST00000559858 STAC3Q96MF2 364 aa8.26□□□□□ -1.09
ZEB1-217ENST00000559858 SSFA2P28290 1259 aa8.25□□□□□ -1.09
ZEB1-217ENST00000559858 WWC1Q8IX03 1113 aa8.25□□□□□ -1.09
ZEB1-217ENST00000559858 MYRIPQ8NFW9 859 aa8.25□□□□□ -1.09
ZEB1-217ENST00000559858 RBSNQ9H1K0 784 aa8.25□□□□□ -1.09
ZEB1-217ENST00000559858 NPC1L1Q9UHC9 1359 aa8.25□□□□□ -1.09
ZEB1-217ENST00000559858 WDR7Q9Y4E6 1490 aa8.25□□□□□ -1.09
ZEB1-217ENST00000559858 LAMC3Q9Y6N6 1575 aa8.25□□□□□ -1.09
ZEB1-217ENST00000559858 ZSCAN23Q3MJ62 389 aa8.25□□□□□ -1.09
ZEB1-217ENST00000559858 CROCC2H7BZ55 1655 aa8.25□□□□□ -1.09
ZEB1-217ENST00000559858 K7ELQ4 463 aaPredicted RBP8.24□□□□□ -1.09
ZEB1-217ENST00000559858 CDCA8Q53HL2 280 aa8.24□□□□□ -1.09
ZEB1-217ENST00000559858 TAF3Q5VWG9 929 aa8.24□□□□□ -1.09
ZEB1-217ENST00000559858 TDRD9Q8NDG6 1382 aaKnown RBP8.24□□□□□ -1.09
ZEB1-217ENST00000559858 PTPRGP23470 1445 aa8.24□□□□□ -1.09
ZEB1-217ENST00000559858 ASXL1Q8IXJ9 1541 aa8.24□□□□□ -1.09
ZEB1-217ENST00000559858 FAM135AQ9P2D6 1515 aa8.24□□□□□ -1.09
ZEB1-217ENST00000559858 HDAC1Q13547 482 aaPredicted RBP8.24□□□□□ -1.09
ZEB1-217ENST00000559858 MVPQ14764 893 aaKnown RBP8.24□□□□□ -1.09
ZEB1-217ENST00000559858 ZNF777Q9ULD5 760 aaPredicted RBP8.24□□□□□ -1.09
ZEB1-217ENST00000559858 HMGN5P82970 282 aaKnown RBP8.23□□□□□ -1.09
ZEB1-217ENST00000559858 RGL3Q3MIN7 710 aa8.23□□□□□ -1.09
ZEB1-217ENST00000559858 CAVIN1Q6NZI2 390 aaKnown RBP8.23□□□□□ -1.09
ZEB1-217ENST00000559858 PRIMPOLQ96LW4 560 aa8.23□□□□□ -1.09
ZEB1-217ENST00000559858 TNNQ9UQP3 1299 aa8.23□□□□□ -1.09
ZEB1-217ENST00000559858 ITSN2Q9NZM3 1697 aa8.23□□□□□ -1.09
ZEB1-217ENST00000559858 ABCC10Q5T3U5 1492 aa8.23□□□□□ -1.09
ZEB1-217ENST00000559858 KCNA4P22459 653 aa8.23□□□□□ -1.09
ZEB1-217ENST00000559858 BCL11BQ9C0K0 894 aaPredicted RBP8.23□□□□□ -1.09
ZEB1-217ENST00000559858 FOXD4L1Q9NU39 408 aa8.23□□□□□ -1.09
ZEB1-217ENST00000559858 NAP1L2Q9ULW6 460 aaPredicted RBP8.23□□□□□ -1.09
ZEB1-217ENST00000559858 PDIA4P13667 645 aaKnown RBP8.23□□□□□ -1.09
ZEB1-217ENST00000559858 CBX1P83916 185 aa8.23□□□□□ -1.09
ZEB1-217ENST00000559858 GPATCH8Q9UKJ3 1502 aaKnown RBP8.22□□□□□ -1.09
ZEB1-217ENST00000559858 NUP160Q12769 1436 aa8.22□□□□□ -1.09
ZEB1-217ENST00000559858 PRIM1P49642 420 aaKnown RBP8.22□□□□□ -1.09
ZEB1-217ENST00000559858 NUCB2P80303 420 aa8.22□□□□□ -1.09
ZEB1-217ENST00000559858 KIAA2012Q0VF49 1180 aa8.22□□□□□ -1.09
ZEB1-217ENST00000559858 EIF2AK4Q9P2K8 1649 aaKnown RBP8.22□□□□□ -1.09
ZEB1-217ENST00000559858 IQGAP2Q13576 1575 aa8.22□□□□□ -1.09
ZEB1-217ENST00000559858 GTF2F1P35269 517 aaKnown RBP eCLIP8.22□□□□□ -1.09
ZEB1-217ENST00000559858 MCTP1Q6DN14 999 aa8.22□□□□□ -1.09
ZEB1-217ENST00000559858 KIF2CQ99661 725 aa8.22□□□□□ -1.09
ZEB1-217ENST00000559858 LMBRD1Q9NUN5 540 aa8.22□□□□□ -1.09
ZEB1-217ENST00000559858 TROQ12816 1431 aaPredicted RBP8.21□□□□□ -1.09
ZEB1-217ENST00000559858 DNTTIP2Q5QJE6 756 aaKnown RBP8.21□□□□□ -1.09
ZEB1-217ENST00000559858 ZKSCAN2Q63HK3 967 aa8.21□□□□□ -1.09
ZEB1-217ENST00000559858 WDR63Q8IWG1 891 aa8.21□□□□□ -1.09
ZEB1-217ENST00000559858 DZIP1LQ8IYY4 767 aaKnown RBP8.21□□□□□ -1.09
ZEB1-217ENST00000559858 GAS2L2Q8NHY3 880 aa8.21□□□□□ -1.09
ZEB1-217ENST00000559858 A2MP01023 1474 aa8.21□□□□□ -1.1
ZEB1-217ENST00000559858 LRSAM1Q6UWE0 723 aa8.21□□□□□ -1.1
ZEB1-217ENST00000559858 FTSJ3Q8IY81 847 aaKnown RBP8.21□□□□□ -1.1
ZEB1-217ENST00000559858 ZNF710Q8N1W2 664 aa8.21□□□□□ -1.1
ZEB1-217ENST00000559858 TMEM51Q9NW97 253 aa8.21□□□□□ -1.1
ZEB1-217ENST00000559858 GRIN2AQ12879 1464 aa8.2□□□□□ -1.1
ZEB1-217ENST00000559858 CCDC141Q6ZP82 1450 aa8.2□□□□□ -1.1
ZEB1-217ENST00000559858 SHANK2Q9UPX8 1470 aa8.2□□□□□ -1.1
ZEB1-217ENST00000559858 CD2BP2O95400 341 aaKnown RBP8.2□□□□□ -1.1
ZEB1-217ENST00000559858 PTMAP06454 111 aaKnown RBP8.2□□□□□ -1.1
ZEB1-217ENST00000559858 IPO4Q8TEX9 1081 aaKnown RBP8.2□□□□□ -1.1
ZEB1-217ENST00000559858 C9orf84Q5VXU9 1444 aa8.2□□□□□ -1.1
ZEB1-217ENST00000559858 SYNMO15061 1565 aa8.2□□□□□ -1.1
ZEB1-217ENST00000559858 NUP153P49790 1475 aaKnown RBP8.2□□□□□ -1.1
ZEB1-217ENST00000559858 SHROOM2Q13796 1616 aa8.2□□□□□ -1.1
ZEB1-217ENST00000559858 TSPY4P0CV99 314 aa8.2□□□□□ -1.1
ZEB1-217ENST00000559858 TSPY10P0CW01 314 aa8.2□□□□□ -1.1
ZEB1-217ENST00000559858 BCL2L13Q9BXK5 485 aa8.2□□□□□ -1.1
ZEB1-217ENST00000559858 KIF16BQ96L93 1317 aa8.19□□□□□ -1.1
ZEB1-217ENST00000559858 ATP2B3Q16720 1220 aa8.19□□□□□ -1.1
ZEB1-217ENST00000559858 PRG4Q92954 1404 aaPredicted RBP8.19□□□□□ -1.1
ZEB1-217ENST00000559858 BMP2KLQ5H9B9 411 aa8.19□□□□□ -1.1
ZEB1-217ENST00000559858 RUNDC1Q96C34 613 aa8.19□□□□□ -1.1
ZEB1-217ENST00000559858 DDX19BQ9UMR2 479 aa8.19□□□□□ -1.1
ZEB1-217ENST00000559858 KIF3AQ9Y496 699 aa8.19□□□□□ -1.1
ZEB1-217ENST00000559858 NUCB1Q02818 461 aa8.18□□□□□ -1.1
ZEB1-217ENST00000559858 KANK1Q14678 1352 aa8.18□□□□□ -1.1
ZEB1-217ENST00000559858 CYP2E1P05181 493 aaPredicted RBP8.18□□□□□ -1.1
ZEB1-217ENST00000559858 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.18□□□□□ -1.1
ZEB1-217ENST00000559858 PRPF40AO75400 957 aaKnown RBP8.17□□□□□ -1.1
ZEB1-217ENST00000559858 CT47B1P0C2W7 299 aaPredicted RBP8.17□□□□□ -1.1
ZEB1-217ENST00000559858 NEUROD2Q15784 382 aa8.17□□□□□ -1.1
ZEB1-217ENST00000559858 CWC22Q9HCG8 908 aaKnown RBP8.17□□□□□ -1.1
ZEB1-217ENST00000559858 POLR3AO14802 1390 aaPredicted RBP8.17□□□□□ -1.1
ZEB1-217ENST00000559858 PDCL2Q8N4E4 241 aa8.17□□□□□ -1.1
ZEB1-217ENST00000559858 PIBF1Q8WXW3 757 aa8.17□□□□□ -1.1
ZEB1-217ENST00000559858 TSC1Q92574 1164 aa8.17□□□□□ -1.1
ZEB1-217ENST00000559858 RBM42Q9BTD8 480 aaKnown RBP8.17□□□□□ -1.1
ZEB1-217ENST00000559858 CHMP4BQ9H444 224 aaKnown RBP8.17□□□□□ -1.1
ZEB1-217ENST00000559858 RBM27Q9P2N5 1060 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms