RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 PRDM9Q9NQV7 894 aa9.02□□□□□ -0.97
SPG11-218ENST00000559754 GFRA3O60609 400 aa9.01□□□□□ -0.97
SPG11-218ENST00000559754 GJA5P36382 358 aa9.01□□□□□ -0.97
SPG11-218ENST00000559754 MMP16P51512 607 aa9.01□□□□□ -0.97
SPG11-218ENST00000559754 ZNF598Q86UK7 904 aaKnown RBP9.01□□□□□ -0.97
SPG11-218ENST00000559754 RETREG3Q86VR2 466 aa9.01□□□□□ -0.97
SPG11-218ENST00000559754 TBC1D2Q9BYX2 928 aa9.01□□□□□ -0.97
SPG11-218ENST00000559754 MOXD2PA6NHM9 499 aa9□□□□□ -0.97
SPG11-218ENST00000559754 RPIAP49247 311 aa9□□□□□ -0.97
SPG11-218ENST00000559754 LIAT1Q6ZQX7 453 aa9□□□□□ -0.97
SPG11-218ENST00000559754 C6orf229H3BNL8 230 aa8.99□□□□□ -0.97
SPG11-218ENST00000559754 DXOO77932 396 aaKnown RBP8.99□□□□□ -0.97
SPG11-218ENST00000559754 NDUFV2P19404 249 aa8.99□□□□□ -0.97
SPG11-218ENST00000559754 PLA2G2CQ5R387 149 aa8.99□□□□□ -0.97
SPG11-218ENST00000559754 EMID1Q96A84 441 aaPredicted RBP8.99□□□□□ -0.97
SPG11-218ENST00000559754 NRG2O14511 850 aaPredicted RBP8.98□□□□□ -0.97
SPG11-218ENST00000559754 ZBTB24O43167 697 aaPredicted RBP8.98□□□□□ -0.97
SPG11-218ENST00000559754 CD2BP2O95400 341 aaKnown RBP8.98□□□□□ -0.97
SPG11-218ENST00000559754 ZNF697Q5TEC3 545 aa8.98□□□□□ -0.97
SPG11-218ENST00000559754 PCDHGC3Q9UN70 934 aa8.98□□□□□ -0.97
SPG11-218ENST00000559754 PDZRN3Q9UPQ7 1066 aa8.98□□□□□ -0.97
SPG11-218ENST00000559754 SPDYE5A6NIY4 337 aa8.97□□□□□ -0.97
SPG11-218ENST00000559754 JUNDP17535 347 aa8.97□□□□□ -0.97
SPG11-218ENST00000559754 SYMPKQ92797 1274 aaKnown RBP8.97□□□□□ -0.97
SPG11-218ENST00000559754 MTMR2Q13614 643 aa8.96□□□□□ -0.98
SPG11-218ENST00000559754 RSBN1LQ6PCB5 846 aaPredicted RBP8.96□□□□□ -0.98
SPG11-218ENST00000559754 Q6ZNB5 142 aa8.96□□□□□ -0.98
SPG11-218ENST00000559754 SPTLC1O15269 473 aa8.95□□□□□ -0.98
SPG11-218ENST00000559754 PRR20EP86478 221 aa8.94□□□□□ -0.98
SPG11-218ENST00000559754 PRR20CP86479 221 aa8.94□□□□□ -0.98
SPG11-218ENST00000559754 PRR20DP86480 221 aa8.94□□□□□ -0.98
SPG11-218ENST00000559754 PRR20BP86481 221 aa8.94□□□□□ -0.98
SPG11-218ENST00000559754 PRR20AP86496 221 aa8.94□□□□□ -0.98
SPG11-218ENST00000559754 RIC3Q7Z5B4 369 aa8.94□□□□□ -0.98
SPG11-218ENST00000559754 RSPH6AQ9H0K4 717 aa8.94□□□□□ -0.98
SPG11-218ENST00000559754 CCDC24Q8N4L8 307 aa8.93□□□□□ -0.98
SPG11-218ENST00000559754 PRPF38BQ5VTL8 546 aaKnown RBP8.92□□□□□ -0.98
SPG11-218ENST00000559754 ZBTB3Q9H5J0 574 aa8.92□□□□□ -0.98
SPG11-218ENST00000559754 TUSC1Q2TAM9 212 aa8.91□□□□□ -0.98
SPG11-218ENST00000559754 MYSM1Q5VVJ2 828 aa8.91□□□□□ -0.98
SPG11-218ENST00000559754 DESI1Q6ICB0 168 aa8.91□□□□□ -0.98
SPG11-218ENST00000559754 PRR7Q8TB68 274 aa8.91□□□□□ -0.98
SPG11-218ENST00000559754 NUDT12Q9BQG2 462 aa8.91□□□□□ -0.98
SPG11-218ENST00000559754 GDF9O60383 454 aa8.9□□□□□ -0.98
SPG11-218ENST00000559754 TRIM67Q6ZTA4 783 aa8.9□□□□□ -0.98
SPG11-218ENST00000559754 DDRGK1Q96HY6 314 aa8.9□□□□□ -0.98
SPG11-218ENST00000559754 KDM4CQ9H3R0 1056 aa8.9□□□□□ -0.98
SPG11-218ENST00000559754 TRIM32Q13049 653 aa8.89□□□□□ -0.99
SPG11-218ENST00000559754 PTPRNQ16849 979 aa8.89□□□□□ -0.99
SPG11-218ENST00000559754 GPBP1L1Q9HC44 474 aaPredicted RBP8.89□□□□□ -0.99
SPG11-218ENST00000559754 PCDHB15Q9Y5E8 787 aa8.89□□□□□ -0.99
SPG11-218ENST00000559754 CCNYL3P0C7X3 344 aa8.88□□□□□ -0.99
SPG11-218ENST00000559754 HRCP23327 699 aa8.88□□□□□ -0.99
SPG11-218ENST00000559754 TNFRSF10AO00220 468 aa8.87□□□□□ -0.99
SPG11-218ENST00000559754 CLK2P49760 499 aaKnown RBP8.87□□□□□ -0.99
SPG11-218ENST00000559754 FOXC1Q12948 553 aa8.87□□□□□ -0.99
SPG11-218ENST00000559754 CSPP1Q1MSJ5 1256 aa8.87□□□□□ -0.99
SPG11-218ENST00000559754 NUTM2BA6NNL0 878 aaPredicted RBP8.86□□□□□ -0.99
SPG11-218ENST00000559754 NUTM2EB1AL46 878 aaPredicted RBP8.86□□□□□ -0.99
SPG11-218ENST00000559754 DGAT1O75907 488 aa8.86□□□□□ -0.99
SPG11-218ENST00000559754 PKDCCQ504Y2 493 aa8.86□□□□□ -0.99
SPG11-218ENST00000559754 NUTM2DQ5VT03 806 aaPredicted RBP8.86□□□□□ -0.99
SPG11-218ENST00000559754 TRAF7Q6Q0C0 670 aa8.86□□□□□ -0.99
SPG11-218ENST00000559754 NUTM2AQ8IVF1 878 aaPredicted RBP8.86□□□□□ -0.99
SPG11-218ENST00000559754 PKD2L1Q9P0L9 805 aa8.86□□□□□ -0.99
SPG11-218ENST00000559754 LIMD1Q9UGP4 676 aa8.86□□□□□ -0.99
SPG11-218ENST00000559754 EVA1BQ9NVM1 165 aa8.85□□□□□ -0.99
SPG11-218ENST00000559754 WNT7AO00755 349 aa8.84□□□□□ -0.99
SPG11-218ENST00000559754 LILRB3O75022 631 aa8.84□□□□□ -0.99
SPG11-218ENST00000559754 WNT7BP56706 349 aa8.84□□□□□ -0.99
SPG11-218ENST00000559754 CABLES1Q8TDN4 633 aa8.84□□□□□ -0.99
SPG11-218ENST00000559754 CFAP99D6REC4 459 aa8.83□□□□□ -1
SPG11-218ENST00000559754 KCNH2Q12809 1159 aa8.83□□□□□ -1
SPG11-218ENST00000559754 SKIV2LQ15477 1246 aaKnown RBP8.83□□□□□ -1
SPG11-218ENST00000559754 SH3D19Q5HYK7 790 aa8.83□□□□□ -1
SPG11-218ENST00000559754 LYPD8Q6UX82 237 aa8.83□□□□□ -1
SPG11-218ENST00000559754 CYP4X1Q8N118 509 aa8.83□□□□□ -1
SPG11-218ENST00000559754 FAM117AQ9C073 453 aa8.83□□□□□ -1
SPG11-218ENST00000559754 POLR3EQ9NVU0 708 aa8.83□□□□□ -1
SPG11-218ENST00000559754 FAM187AA6NFU0 413 aa8.82□□□□□ -1
SPG11-218ENST00000559754 QPCTQ16769 361 aa8.82□□□□□ -1
SPG11-218ENST00000559754 HELBQ8NG08 1087 aaPredicted RBP8.82□□□□□ -1
SPG11-218ENST00000559754 TPRNQ4KMQ1 711 aa8.81□□□□□ -1
SPG11-218ENST00000559754 PTCRAQ6ISU1 281 aaPredicted RBP8.81□□□□□ -1
SPG11-218ENST00000559754 UNC93B1Q9H1C4 597 aa8.81□□□□□ -1
SPG11-218ENST00000559754 TTC24A2A3L6 582 aaPredicted RBP8.8□□□□□ -1
SPG11-218ENST00000559754 CTHP32929 405 aa8.8□□□□□ -1
SPG11-218ENST00000559754 NEUROD2Q15784 382 aa8.8□□□□□ -1
SPG11-218ENST00000559754 SNIP1Q8TAD8 396 aaKnown RBP8.8□□□□□ -1
SPG11-218ENST00000559754 TSC1Q92574 1164 aa8.8□□□□□ -1
SPG11-218ENST00000559754 TOR4AQ9NXH8 423 aa8.8□□□□□ -1
SPG11-218ENST00000559754 ATP1B4Q9UN42 357 aaPredicted RBP8.8□□□□□ -1
SPG11-218ENST00000559754 RC3H1Q5TC82 1133 aaKnown RBP8.79□□□□□ -1
SPG11-218ENST00000559754 MRGPRX2Q96LB1 330 aa8.79□□□□□ -1
SPG11-218ENST00000559754 PLEKHG3A1L390 1219 aa8.78□□□□□ -1
SPG11-218ENST00000559754 SKOR1P84550 965 aa8.78□□□□□ -1
SPG11-218ENST00000559754 RTL5Q5HYW3 569 aaPredicted RBP8.77□□□□□ -1.01
SPG11-218ENST00000559754 F12P00748 615 aaPredicted RBP8.76□□□□□ -1.01
SPG11-218ENST00000559754 EHBP1Q8NDI1 1231 aa8.76□□□□□ -1.01
SPG11-218ENST00000559754 LCE2BO14633 110 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms