RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 NPHP3Q7Z494 1330 aa16.45■□□□□ 0.22
TRAF3-207ENST00000559734 GJD4Q96KN9 370 aaPredicted RBP16.45■□□□□ 0.22
TRAF3-207ENST00000559734 BCL9LQ86UU0 1499 aa16.45■□□□□ 0.22
TRAF3-207ENST00000559734 HFM1A2PYH4 1435 aa16.44■□□□□ 0.22
TRAF3-207ENST00000559734 KIF1BO60333 1816 aa16.43■□□□□ 0.22
TRAF3-207ENST00000559734 NUTM2FA1L443 756 aa16.43■□□□□ 0.22
TRAF3-207ENST00000559734 VGFO15240 615 aaPredicted RBP16.43■□□□□ 0.22
TRAF3-207ENST00000559734 FOXO3O43524 673 aa16.43■□□□□ 0.22
TRAF3-207ENST00000559734 BLMP54132 1417 aaPredicted RBP16.42■□□□□ 0.22
TRAF3-207ENST00000559734 PXDNQ92626 1479 aa16.42■□□□□ 0.22
TRAF3-207ENST00000559734 SF3B2Q13435 895 aaKnown RBP16.41■□□□□ 0.22
TRAF3-207ENST00000559734 DEFB132Q7Z7B7 95 aa16.41■□□□□ 0.22
TRAF3-207ENST00000559734 PPARGC1BQ86YN6 1023 aaKnown RBP16.4■□□□□ 0.22
TRAF3-207ENST00000559734 RALGAPBQ86X10 1494 aa16.4■□□□□ 0.22
TRAF3-207ENST00000559734 MARF1Q9Y4F3 1742 aaKnown RBP16.39■□□□□ 0.21
TRAF3-207ENST00000559734 CDC42BPGQ6DT37 1551 aa16.39■□□□□ 0.21
TRAF3-207ENST00000559734 PLEKHG5O94827 1062 aa16.39■□□□□ 0.21
TRAF3-207ENST00000559734 UNC5CLQ8IV45 518 aa16.39■□□□□ 0.21
TRAF3-207ENST00000559734 LRPPRCP42704 1394 aaKnown RBP16.38■□□□□ 0.21
TRAF3-207ENST00000559734 GLI3P10071 1580 aa16.38■□□□□ 0.21
TRAF3-207ENST00000559734 PRAG1Q86YV5 1406 aa16.37■□□□□ 0.21
TRAF3-207ENST00000559734 HAP1P54257 671 aaPredicted RBP16.37■□□□□ 0.21
TRAF3-207ENST00000559734 STK26Q9P289 416 aa16.37■□□□□ 0.21
TRAF3-207ENST00000559734 NAIPQ13075 1403 aa16.36■□□□□ 0.21
TRAF3-207ENST00000559734 CCDC9Q9Y3X0 531 aaKnown RBP16.36■□□□□ 0.21
TRAF3-207ENST00000559734 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.36■□□□□ 0.21
TRAF3-207ENST00000559734 RPGRIP1LQ68CZ1 1315 aa16.35■□□□□ 0.21
TRAF3-207ENST00000559734 EP400Q96L91 3159 aa16.35■□□□□ 0.21
TRAF3-207ENST00000559734 SLIT2O94813 1529 aa16.35■□□□□ 0.21
TRAF3-207ENST00000559734 WAPLQ7Z5K2 1190 aa16.34■□□□□ 0.21
TRAF3-207ENST00000559734 SEPT12Q8IYM1 358 aa16.34■□□□□ 0.21
TRAF3-207ENST00000559734 A0A0G2JS52 829 aa16.33■□□□□ 0.2
TRAF3-207ENST00000559734 PSDA5PKW4 1024 aaPredicted RBP16.33■□□□□ 0.2
TRAF3-207ENST00000559734 MYT1Q01538 1121 aa16.33■□□□□ 0.2
TRAF3-207ENST00000559734 SPATA31A3Q5VYP0 1347 aa16.32■□□□□ 0.2
TRAF3-207ENST00000559734 USP32Q8NFA0 1604 aa16.32■□□□□ 0.2
TRAF3-207ENST00000559734 BRWD3Q6RI45 1802 aa16.31■□□□□ 0.2
TRAF3-207ENST00000559734 PPLO60437 1756 aa16.31■□□□□ 0.2
TRAF3-207ENST00000559734 CCDC144AA2RUR9 1427 aa16.3■□□□□ 0.2
TRAF3-207ENST00000559734 PLEKHH1Q9ULM0 1364 aa16.3■□□□□ 0.2
TRAF3-207ENST00000559734 KRT28Q7Z3Y7 464 aa16.3■□□□□ 0.2
TRAF3-207ENST00000559734 KRT27Q7Z3Y8 459 aa16.3■□□□□ 0.2
TRAF3-207ENST00000559734 CABLES1Q8TDN4 633 aa16.3■□□□□ 0.2
TRAF3-207ENST00000559734 LRP5O75197 1615 aa16.3■□□□□ 0.2
TRAF3-207ENST00000559734 LMOD2Q6P5Q4 547 aa16.29■□□□□ 0.2
TRAF3-207ENST00000559734 SLC4A1APQ9BWU0 796 aaKnown RBP16.29■□□□□ 0.2
TRAF3-207ENST00000559734 ADGRF5Q8IZF2 1346 aa16.28■□□□□ 0.2
TRAF3-207ENST00000559734 VPS72Q15906 364 aa16.28■□□□□ 0.2
TRAF3-207ENST00000559734 RRBP1Q9P2E9 1410 aaKnown RBP16.28■□□□□ 0.2
TRAF3-207ENST00000559734 KIF1AQ12756 1690 aa16.27■□□□□ 0.2
TRAF3-207ENST00000559734 BAG6P46379 1132 aa16.27■□□□□ 0.2
TRAF3-207ENST00000559734 RGL3Q3MIN7 710 aa16.27■□□□□ 0.2
TRAF3-207ENST00000559734 TMEM132EQ6IEE7 984 aa16.27■□□□□ 0.2
TRAF3-207ENST00000559734 TNS3Q68CZ2 1445 aa16.27■□□□□ 0.19
TRAF3-207ENST00000559734 FMN2Q9NZ56 1722 aa16.26■□□□□ 0.19
TRAF3-207ENST00000559734 TECPR2O15040 1411 aa16.26■□□□□ 0.19
TRAF3-207ENST00000559734 PLCH1Q4KWH8 1693 aa16.25■□□□□ 0.19
TRAF3-207ENST00000559734 HRCP23327 699 aa16.24■□□□□ 0.19
TRAF3-207ENST00000559734 PSME1Q06323 249 aa16.24■□□□□ 0.19
TRAF3-207ENST00000559734 PHF8Q9UPP1 1060 aa16.24■□□□□ 0.19
TRAF3-207ENST00000559734 FAM98CQ17RN3 349 aaKnown RBP16.23■□□□□ 0.19
TRAF3-207ENST00000559734 ABCC11Q96J66 1382 aa16.23■□□□□ 0.19
TRAF3-207ENST00000559734 KNDC1Q76NI1 1749 aa16.22■□□□□ 0.19
TRAF3-207ENST00000559734 EN1Q05925 392 aaPredicted RBP16.21■□□□□ 0.19
TRAF3-207ENST00000559734 NWD2Q9ULI1 1742 aa16.21■□□□□ 0.19
TRAF3-207ENST00000559734 YTHDC2Q9H6S0 1430 aaKnown RBP16.2■□□□□ 0.18
TRAF3-207ENST00000559734 ONECUT3O60422 494 aaPredicted RBP16.2■□□□□ 0.18
TRAF3-207ENST00000559734 SAFB2Q14151 953 aaKnown RBP eCLIP16.2■□□□□ 0.18
TRAF3-207ENST00000559734 ABCA3Q99758 1704 aa16.19■□□□□ 0.18
TRAF3-207ENST00000559734 ARHGEF10O15013 1369 aa16.19■□□□□ 0.18
TRAF3-207ENST00000559734 ANKRD30BQ9BXX2 1392 aa16.19■□□□□ 0.18
TRAF3-207ENST00000559734 R3HDM1Q15032 1099 aaKnown RBP16.19■□□□□ 0.18
TRAF3-207ENST00000559734 FAM182BQ5T319 152 aa16.19■□□□□ 0.18
TRAF3-207ENST00000559734 IFT172Q9UG01 1749 aa16.19■□□□□ 0.18
TRAF3-207ENST00000559734 SBNO1A3KN83 1393 aa16.18■□□□□ 0.18
TRAF3-207ENST00000559734 FAM83GA6ND36 823 aa16.18■□□□□ 0.18
TRAF3-207ENST00000559734 PMFBP1Q8TBY8 1022 aa16.18■□□□□ 0.18
TRAF3-207ENST00000559734 BTG4Q9NY30 223 aa16.18■□□□□ 0.18
TRAF3-207ENST00000559734 PIK3C2GO75747 1445 aa16.18■□□□□ 0.18
TRAF3-207ENST00000559734 NRXN1Q9ULB1 1477 aa16.17■□□□□ 0.18
TRAF3-207ENST00000559734 RGPD8O14715 1765 aaPredicted RBP16.17■□□□□ 0.18
TRAF3-207ENST00000559734 SPATA31E1Q6ZUB1 1445 aa16.15■□□□□ 0.18
TRAF3-207ENST00000559734 NRAPQ86VF7 1730 aa16.15■□□□□ 0.18
TRAF3-207ENST00000559734 RGPD1P0DJD0 1748 aa16.14■□□□□ 0.17
TRAF3-207ENST00000559734 EZH2Q15910 746 aaKnown RBP16.13■□□□□ 0.17
TRAF3-207ENST00000559734 PRAM1Q96QH2 718 aa16.13■□□□□ 0.17
TRAF3-207ENST00000559734 DHX57Q6P158 1386 aaKnown RBP16.12■□□□□ 0.17
TRAF3-207ENST00000559734 SIRT1Q96EB6 747 aa16.11■□□□□ 0.17
TRAF3-207ENST00000559734 POGKQ9P215 609 aa16.11■□□□□ 0.17
TRAF3-207ENST00000559734 CFAP70Q5T0N1 1121 aa16.1■□□□□ 0.17
TRAF3-207ENST00000559734 SPATA31A5Q5VU36 1347 aa16.1■□□□□ 0.17
TRAF3-207ENST00000559734 SPATA31A7Q8IWB4 1347 aa16.1■□□□□ 0.17
TRAF3-207ENST00000559734 COL14A1Q05707 1796 aaKnown RBP16.1■□□□□ 0.17
TRAF3-207ENST00000559734 C14orf93Q9H972 538 aaKnown RBP16.09■□□□□ 0.17
TRAF3-207ENST00000559734 GPRASP1Q5JY77 1395 aa16.09■□□□□ 0.17
TRAF3-207ENST00000559734 ADGRB2O60241 1585 aa16.09■□□□□ 0.17
TRAF3-207ENST00000559734 TNS1Q9HBL0 1735 aaKnown RBP16.08■□□□□ 0.17
TRAF3-207ENST00000559734 TRIM37O94972 964 aa16.08■□□□□ 0.16
TRAF3-207ENST00000559734 HIRIP3Q9BW71 556 aaPredicted RBP16.08■□□□□ 0.16
TRAF3-207ENST00000559734 PRDM11Q9NQV5 511 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms