RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 ZNF326Q5BKZ1 582 aaKnown RBP13.95□□□□□ -0.18
SNRPA1-208ENST00000559686 C1orf167Q5SNV9 1468 aa13.94□□□□□ -0.18
SNRPA1-208ENST00000559686 DEFB132Q7Z7B7 95 aa13.94□□□□□ -0.18
SNRPA1-208ENST00000559686 CCDC125Q86Z20 511 aa13.94□□□□□ -0.18
SNRPA1-208ENST00000559686 FNBP4Q8N3X1 1017 aaPredicted RBP13.94□□□□□ -0.18
SNRPA1-208ENST00000559686 PTCH1Q13635 1447 aa13.93□□□□□ -0.18
SNRPA1-208ENST00000559686 MARF1Q9Y4F3 1742 aaKnown RBP13.93□□□□□ -0.18
SNRPA1-208ENST00000559686 SPINK5Q9NQ38 1064 aaPredicted RBP13.92□□□□□ -0.18
SNRPA1-208ENST00000559686 LAMC1P11047 1609 aa13.91□□□□□ -0.18
SNRPA1-208ENST00000559686 PSDA5PKW4 1024 aaPredicted RBP13.91□□□□□ -0.18
SNRPA1-208ENST00000559686 BRWD3Q6RI45 1802 aa13.91□□□□□ -0.18
SNRPA1-208ENST00000559686 SOS2Q07890 1332 aaPredicted RBP13.9□□□□□ -0.18
SNRPA1-208ENST00000559686 IQGAP3Q86VI3 1631 aa13.9□□□□□ -0.18
SNRPA1-208ENST00000559686 COL22A1Q8NFW1 1626 aaPredicted RBP13.9□□□□□ -0.18
SNRPA1-208ENST00000559686 XPCQ01831 940 aaPredicted RBP13.9□□□□□ -0.18
SNRPA1-208ENST00000559686 GJD4Q96KN9 370 aaPredicted RBP13.9□□□□□ -0.18
SNRPA1-208ENST00000559686 BCL9LQ86UU0 1499 aa13.9□□□□□ -0.18
SNRPA1-208ENST00000559686 LRP5O75197 1615 aa13.9□□□□□ -0.19
SNRPA1-208ENST00000559686 BLMP54132 1417 aaPredicted RBP13.9□□□□□ -0.19
SNRPA1-208ENST00000559686 SF3B2Q13435 895 aaKnown RBP13.89□□□□□ -0.19
SNRPA1-208ENST00000559686 SPHKAPQ2M3C7 1700 aa13.87□□□□□ -0.19
SNRPA1-208ENST00000559686 DSG3P32926 999 aa13.87□□□□□ -0.19
SNRPA1-208ENST00000559686 GLI3P10071 1580 aa13.87□□□□□ -0.19
SNRPA1-208ENST00000559686 MYOM2P54296 1465 aa13.87□□□□□ -0.19
SNRPA1-208ENST00000559686 NUP155O75694 1391 aa13.86□□□□□ -0.19
SNRPA1-208ENST00000559686 PLEKHG5O94827 1062 aa13.86□□□□□ -0.19
SNRPA1-208ENST00000559686 RALGAPBQ86X10 1494 aa13.86□□□□□ -0.19
SNRPA1-208ENST00000559686 ESCO1Q5FWF5 840 aa13.85□□□□□ -0.19
SNRPA1-208ENST00000559686 ROBO2Q9HCK4 1378 aa13.84□□□□□ -0.19
SNRPA1-208ENST00000559686 SLC4A2P04920 1241 aa13.84□□□□□ -0.19
SNRPA1-208ENST00000559686 NEXMIFQ5QGS0 1516 aa13.84□□□□□ -0.19
SNRPA1-208ENST00000559686 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.84□□□□□ -0.19
SNRPA1-208ENST00000559686 NUTM2FA1L443 756 aa13.83□□□□□ -0.2
SNRPA1-208ENST00000559686 CCDC9Q9Y3X0 531 aaKnown RBP13.83□□□□□ -0.2
SNRPA1-208ENST00000559686 FOXO3O43524 673 aa13.82□□□□□ -0.2
SNRPA1-208ENST00000559686 UNC5CLQ8IV45 518 aa13.82□□□□□ -0.2
SNRPA1-208ENST00000559686 SEPT12Q8IYM1 358 aa13.82□□□□□ -0.2
SNRPA1-208ENST00000559686 NPHP3Q7Z494 1330 aa13.82□□□□□ -0.2
SNRPA1-208ENST00000559686 CLTCL1P53675 1640 aa13.82□□□□□ -0.2
SNRPA1-208ENST00000559686 PXDNQ92626 1479 aa13.81□□□□□ -0.2
SNRPA1-208ENST00000559686 ITGAEP38570 1179 aa13.81□□□□□ -0.2
SNRPA1-208ENST00000559686 A0A0G2JS52 829 aa13.8□□□□□ -0.2
SNRPA1-208ENST00000559686 HRCP23327 699 aa13.8□□□□□ -0.2
SNRPA1-208ENST00000559686 MYT1Q01538 1121 aa13.8□□□□□ -0.2
SNRPA1-208ENST00000559686 KIF1BO60333 1816 aa13.79□□□□□ -0.2
SNRPA1-208ENST00000559686 HAP1P54257 671 aaPredicted RBP13.78□□□□□ -0.2
SNRPA1-208ENST00000559686 SLIT2O94813 1529 aa13.78□□□□□ -0.2
SNRPA1-208ENST00000559686 BAG6P46379 1132 aa13.77□□□□□ -0.21
SNRPA1-208ENST00000559686 R3HDM1Q15032 1099 aaKnown RBP13.77□□□□□ -0.21
SNRPA1-208ENST00000559686 KRT27Q7Z3Y8 459 aa13.77□□□□□ -0.21
SNRPA1-208ENST00000559686 USP32Q8NFA0 1604 aa13.77□□□□□ -0.21
SNRPA1-208ENST00000559686 PLCH1Q4KWH8 1693 aa13.76□□□□□ -0.21
SNRPA1-208ENST00000559686 CABLES1Q8TDN4 633 aa13.75□□□□□ -0.21
SNRPA1-208ENST00000559686 CDC42BPGQ6DT37 1551 aa13.75□□□□□ -0.21
SNRPA1-208ENST00000559686 HFM1A2PYH4 1435 aa13.74□□□□□ -0.21
SNRPA1-208ENST00000559686 EN1Q05925 392 aaPredicted RBP13.74□□□□□ -0.21
SNRPA1-208ENST00000559686 FAM182BQ5T319 152 aa13.74□□□□□ -0.21
SNRPA1-208ENST00000559686 YY1P25490 414 aa13.73□□□□□ -0.21
SNRPA1-208ENST00000559686 STK26Q9P289 416 aa13.73□□□□□ -0.21
SNRPA1-208ENST00000559686 NAIPQ13075 1403 aa13.73□□□□□ -0.21
SNRPA1-208ENST00000559686 LRPPRCP42704 1394 aaKnown RBP13.72□□□□□ -0.21
SNRPA1-208ENST00000559686 ROCK1Q13464 1354 aa13.72□□□□□ -0.21
SNRPA1-208ENST00000559686 SPATA31A3Q5VYP0 1347 aa13.72□□□□□ -0.21
SNRPA1-208ENST00000559686 VPS72Q15906 364 aa13.72□□□□□ -0.21
SNRPA1-208ENST00000559686 LMOD2Q6P5Q4 547 aa13.72□□□□□ -0.21
SNRPA1-208ENST00000559686 VGFO15240 615 aaPredicted RBP13.71□□□□□ -0.21
SNRPA1-208ENST00000559686 FAM98CQ17RN3 349 aaKnown RBP13.71□□□□□ -0.21
SNRPA1-208ENST00000559686 WAPLQ7Z5K2 1190 aa13.71□□□□□ -0.21
SNRPA1-208ENST00000559686 RGPD1P0DJD0 1748 aa13.7□□□□□ -0.22
SNRPA1-208ENST00000559686 KRT28Q7Z3Y7 464 aa13.7□□□□□ -0.22
SNRPA1-208ENST00000559686 ABCA3Q99758 1704 aa13.7□□□□□ -0.22
SNRPA1-208ENST00000559686 NWD2Q9ULI1 1742 aa13.7□□□□□ -0.22
SNRPA1-208ENST00000559686 RGPD8O14715 1765 aaPredicted RBP13.69□□□□□ -0.22
SNRPA1-208ENST00000559686 KIF1AQ12756 1690 aa13.69□□□□□ -0.22
SNRPA1-208ENST00000559686 PPLO60437 1756 aa13.68□□□□□ -0.22
SNRPA1-208ENST00000559686 FMN2Q9NZ56 1722 aa13.68□□□□□ -0.22
SNRPA1-208ENST00000559686 CCDC144AA2RUR9 1427 aa13.67□□□□□ -0.22
SNRPA1-208ENST00000559686 EZH2Q15910 746 aaKnown RBP13.67□□□□□ -0.22
SNRPA1-208ENST00000559686 TNS1Q9HBL0 1735 aaKnown RBP13.67□□□□□ -0.22
SNRPA1-208ENST00000559686 PRAG1Q86YV5 1406 aa13.66□□□□□ -0.22
SNRPA1-208ENST00000559686 ONECUT3O60422 494 aaPredicted RBP13.66□□□□□ -0.22
SNRPA1-208ENST00000559686 ZNF219Q9P2Y4 722 aaPredicted RBP13.66□□□□□ -0.22
SNRPA1-208ENST00000559686 PLEKHH1Q9ULM0 1364 aa13.66□□□□□ -0.22
SNRPA1-208ENST00000559686 TNS3Q68CZ2 1445 aa13.65□□□□□ -0.22
SNRPA1-208ENST00000559686 NRAPQ86VF7 1730 aa13.65□□□□□ -0.22
SNRPA1-208ENST00000559686 IFT172Q9UG01 1749 aa13.64□□□□□ -0.23
SNRPA1-208ENST00000559686 FAM83GA6ND36 823 aa13.64□□□□□ -0.23
SNRPA1-208ENST00000559686 TMEM132EQ6IEE7 984 aa13.63□□□□□ -0.23
SNRPA1-208ENST00000559686 BTG4Q9NY30 223 aa13.63□□□□□ -0.23
SNRPA1-208ENST00000559686 PSME1Q06323 249 aa13.62□□□□□ -0.23
SNRPA1-208ENST00000559686 PPARGC1BQ86YN6 1023 aaKnown RBP13.62□□□□□ -0.23
SNRPA1-208ENST00000559686 PHF8Q9UPP1 1060 aa13.62□□□□□ -0.23
SNRPA1-208ENST00000559686 TRIM37O94972 964 aa13.61□□□□□ -0.23
SNRPA1-208ENST00000559686 ADGRF5Q8IZF2 1346 aa13.61□□□□□ -0.23
SNRPA1-208ENST00000559686 ABCB7O75027 752 aa13.6□□□□□ -0.23
SNRPA1-208ENST00000559686 PPP1R1BQ9UD71 204 aaPredicted RBP13.6□□□□□ -0.23
SNRPA1-208ENST00000559686 RPGRIP1LQ68CZ1 1315 aa13.6□□□□□ -0.23
SNRPA1-208ENST00000559686 KNDC1Q76NI1 1749 aa13.59□□□□□ -0.23
SNRPA1-208ENST00000559686 RGL3Q3MIN7 710 aa13.59□□□□□ -0.23
SNRPA1-208ENST00000559686 POTEHQ6S545 545 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms