RNA–Protein interactions for RNA: ENST00000559601.2

AP3S2-210, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 4

Gene AP3S2, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-210ENST00000559601 IRF6O14896 467 aa8.95□□□□□ -0.98
AP3S2-210ENST00000559601 AVPP01185 164 aa8.95□□□□□ -0.98
AP3S2-210ENST00000559601 MMP16P51512 607 aa8.95□□□□□ -0.98
AP3S2-210ENST00000559601 USP46P62068 366 aa8.95□□□□□ -0.98
AP3S2-210ENST00000559601 VSIG10Q8N0Z9 540 aa8.95□□□□□ -0.98
AP3S2-210ENST00000559601 MINK1Q8N4C8 1332 aaPredicted RBP8.95□□□□□ -0.98
AP3S2-210ENST00000559601 RNF19BQ6ZMZ0 732 aa8.94□□□□□ -0.98
AP3S2-210ENST00000559601 PRDM9Q9NQV7 894 aa8.94□□□□□ -0.98
AP3S2-210ENST00000559601 GMPR2Q9P2T1 348 aaKnown RBP8.94□□□□□ -0.98
AP3S2-210ENST00000559601 STK17AQ9UEE5 414 aa8.94□□□□□ -0.98
AP3S2-210ENST00000559601 KDM4AO75164 1064 aa8.92□□□□□ -0.98
AP3S2-210ENST00000559601 C11orf95C9JLR9 678 aaPredicted RBP8.91□□□□□ -0.98
AP3S2-210ENST00000559601 SMCPP49901 116 aaPredicted RBP8.91□□□□□ -0.98
AP3S2-210ENST00000559601 CTC1Q2NKJ3 1217 aa8.91□□□□□ -0.98
AP3S2-210ENST00000559601 ZBTB24O43167 697 aaPredicted RBP8.9□□□□□ -0.98
AP3S2-210ENST00000559601 DXOO77932 396 aaKnown RBP8.9□□□□□ -0.98
AP3S2-210ENST00000559601 NFX1Q12986 1120 aaKnown RBP8.9□□□□□ -0.98
AP3S2-210ENST00000559601 WNT7AO00755 349 aa8.89□□□□□ -0.99
AP3S2-210ENST00000559601 CYP4X1Q8N118 509 aa8.89□□□□□ -0.99
AP3S2-210ENST00000559601 USB1Q9BQ65 265 aaKnown RBP8.89□□□□□ -0.99
AP3S2-210ENST00000559601 AXIN1O15169 862 aa8.88□□□□□ -0.99
AP3S2-210ENST00000559601 WIPF1O43516 503 aa8.88□□□□□ -0.99
AP3S2-210ENST00000559601 TRIM32Q13049 653 aa8.88□□□□□ -0.99
AP3S2-210ENST00000559601 HOXA2O43364 376 aa8.87□□□□□ -0.99
AP3S2-210ENST00000559601 CLCN1P35523 988 aa8.87□□□□□ -0.99
AP3S2-210ENST00000559601 MDM2Q00987 491 aaPredicted RBP8.87□□□□□ -0.99
AP3S2-210ENST00000559601 INSM1Q01101 510 aaPredicted RBP8.87□□□□□ -0.99
AP3S2-210ENST00000559601 CCDC102AQ96A19 550 aa8.87□□□□□ -0.99
AP3S2-210ENST00000559601 GPCPD1Q9NPB8 672 aa8.87□□□□□ -0.99
AP3S2-210ENST00000559601 REPIN1Q9BWE0 567 aaKnown RBP8.85□□□□□ -0.99
AP3S2-210ENST00000559601 FAM217BQ9NTX9 383 aaPredicted RBP8.85□□□□□ -0.99
AP3S2-210ENST00000559601 SNIP1Q8TAD8 396 aaKnown RBP8.84□□□□□ -0.99
AP3S2-210ENST00000559601 LCE2CQ5TA81 110 aa8.83□□□□□ -1
AP3S2-210ENST00000559601 TTC24A2A3L6 582 aaPredicted RBP8.82□□□□□ -1
AP3S2-210ENST00000559601 WNT7BP56706 349 aa8.82□□□□□ -1
AP3S2-210ENST00000559601 SMPD1P17405 629 aa8.81□□□□□ -1
AP3S2-210ENST00000559601 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.81□□□□□ -1
AP3S2-210ENST00000559601 JUNDP17535 347 aa8.8□□□□□ -1
AP3S2-210ENST00000559601 RETREG3Q86VR2 466 aa8.8□□□□□ -1
AP3S2-210ENST00000559601 HLA-CQ95604 372 aa8.8□□□□□ -1
AP3S2-210ENST00000559601 MRGPRX2Q96LB1 330 aa8.79□□□□□ -1
AP3S2-210ENST00000559601 SNRPBP14678 240 aaKnown RBP8.78□□□□□ -1
AP3S2-210ENST00000559601 TERTO14746 1132 aaKnown RBP8.77□□□□□ -1.01
AP3S2-210ENST00000559601 NUTM1Q86Y26 1132 aa8.77□□□□□ -1.01
AP3S2-210ENST00000559601 SKOR1P84550 965 aa8.76□□□□□ -1.01
AP3S2-210ENST00000559601 ATP13A2Q9NQ11 1180 aa8.76□□□□□ -1.01
AP3S2-210ENST00000559601 AMHR2Q16671 573 aa8.75□□□□□ -1.01
AP3S2-210ENST00000559601 RC3H1Q5TC82 1133 aaKnown RBP8.75□□□□□ -1.01
AP3S2-210ENST00000559601 KRI1Q8N9T8 703 aaKnown RBP8.75□□□□□ -1.01
AP3S2-210ENST00000559601 GUCA2AQ02747 115 aa8.74□□□□□ -1.01
AP3S2-210ENST00000559601 BARGINQ6ZT62 677 aa8.74□□□□□ -1.01
AP3S2-210ENST00000559601 CCDC24Q8N4L8 307 aa8.74□□□□□ -1.01
AP3S2-210ENST00000559601 NUDT12Q9BQG2 462 aa8.74□□□□□ -1.01
AP3S2-210ENST00000559601 LOC100996750A0A140TA64 210 aa8.73□□□□□ -1.01
AP3S2-210ENST00000559601 J3QL48 77 aa8.73□□□□□ -1.01
AP3S2-210ENST00000559601 FDX1P10109 184 aa8.73□□□□□ -1.01
AP3S2-210ENST00000559601 KRTAP4-6Q9BYQ5 205 aa8.73□□□□□ -1.01
AP3S2-210ENST00000559601 SENP2Q9HC62 589 aa8.73□□□□□ -1.01
AP3S2-210ENST00000559601 ZMYND10O75800 440 aa8.72□□□□□ -1.01
AP3S2-210ENST00000559601 SSTR3P32745 418 aaPredicted RBP8.72□□□□□ -1.01
AP3S2-210ENST00000559601 SYMPKQ92797 1274 aaKnown RBP8.72□□□□□ -1.01
AP3S2-210ENST00000559601 TRIM47Q96LD4 638 aa8.72□□□□□ -1.01
AP3S2-210ENST00000559601 PCDHGC3Q9UN70 934 aa8.72□□□□□ -1.01
AP3S2-210ENST00000559601 GJA5P36382 358 aa8.71□□□□□ -1.02
AP3S2-210ENST00000559601 PTPRNQ16849 979 aa8.71□□□□□ -1.02
AP3S2-210ENST00000559601 DESI1Q6ICB0 168 aa8.71□□□□□ -1.02
AP3S2-210ENST00000559601 SPIRE2Q8WWL2 714 aa8.71□□□□□ -1.02
AP3S2-210ENST00000559601 SPDYE5A6NIY4 337 aa8.7□□□□□ -1.02
AP3S2-210ENST00000559601 SIAH2O43255 324 aa8.7□□□□□ -1.02
AP3S2-210ENST00000559601 CCNYL3P0C7X3 344 aa8.7□□□□□ -1.02
AP3S2-210ENST00000559601 KIFC2Q96AC6 838 aa8.7□□□□□ -1.02
AP3S2-210ENST00000559601 MS4A1P11836 297 aa8.69□□□□□ -1.02
AP3S2-210ENST00000559601 HPS1Q92902 700 aa8.69□□□□□ -1.02
AP3S2-210ENST00000559601 C6orf229H3BNL8 230 aa8.68□□□□□ -1.02
AP3S2-210ENST00000559601 PTCRAQ6ISU1 281 aaPredicted RBP8.68□□□□□ -1.02
AP3S2-210ENST00000559601 EVA1BQ9NVM1 165 aa8.68□□□□□ -1.02
AP3S2-210ENST00000559601 DIXDC1Q155Q3 683 aa8.67□□□□□ -1.02
AP3S2-210ENST00000559601 FAM181BA6NEQ2 426 aa8.66□□□□□ -1.02
AP3S2-210ENST00000559601 TTLL12Q14166 644 aaPredicted RBP8.66□□□□□ -1.02
AP3S2-210ENST00000559601 GIGYF2Q6Y7W6 1299 aaKnown RBP8.66□□□□□ -1.02
AP3S2-210ENST00000559601 MPNDQ8N594 471 aa8.66□□□□□ -1.02
AP3S2-210ENST00000559601 MOXD2PA6NHM9 499 aa8.65□□□□□ -1.02
AP3S2-210ENST00000559601 ALDH1A1P00352 501 aa8.65□□□□□ -1.02
AP3S2-210ENST00000559601 SH3BP2P78314 561 aa8.65□□□□□ -1.02
AP3S2-210ENST00000559601 MTMR2Q13614 643 aa8.65□□□□□ -1.02
AP3S2-210ENST00000559601 EHBP1Q8NDI1 1231 aa8.65□□□□□ -1.02
AP3S2-210ENST00000559601 ZC3H15Q8WU90 426 aaKnown RBP8.65□□□□□ -1.02
AP3S2-210ENST00000559601 KCNH2Q12809 1159 aa8.64□□□□□ -1.03
AP3S2-210ENST00000559601 UNC93B1Q9H1C4 597 aa8.64□□□□□ -1.03
AP3S2-210ENST00000559601 NDUFV2P19404 249 aa8.63□□□□□ -1.03
AP3S2-210ENST00000559601 PRR7Q8TB68 274 aa8.63□□□□□ -1.03
AP3S2-210ENST00000559601 SLC16A10Q8TF71 515 aa8.63□□□□□ -1.03
AP3S2-210ENST00000559601 LORP23490 312 aaPredicted RBP8.62□□□□□ -1.03
AP3S2-210ENST00000559601 GMPRP36959 345 aa8.62□□□□□ -1.03
AP3S2-210ENST00000559601 ZSCAN1Q8NBB4 408 aa8.62□□□□□ -1.03
AP3S2-210ENST00000559601 VARSP26640 1264 aaKnown RBP8.61□□□□□ -1.03
AP3S2-210ENST00000559601 RSBN1LQ6PCB5 846 aaPredicted RBP8.61□□□□□ -1.03
AP3S2-210ENST00000559601 BEGAINQ9BUH8 593 aa8.61□□□□□ -1.03
AP3S2-210ENST00000559601 WASF2Q9Y6W5 498 aa8.61□□□□□ -1.03
AP3S2-210ENST00000559601 ZNF511Q8NB15 262 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms