RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 MRGPRX2Q96LB1 330 aa8.25□□□□□ -1.09
CASC4-210ENST00000559550 SLC27A5Q9Y2P5 690 aa8.25□□□□□ -1.09
CASC4-210ENST00000559550 SALL2Q9Y467 1007 aaPredicted RBP8.25□□□□□ -1.09
CASC4-210ENST00000559550 FAM181BA6NEQ2 426 aa8.24□□□□□ -1.09
CASC4-210ENST00000559550 FMNL1O95466 1100 aaPredicted RBP8.24□□□□□ -1.09
CASC4-210ENST00000559550 FUT2Q10981 343 aa8.24□□□□□ -1.09
CASC4-210ENST00000559550 BRICD5Q6PL45 260 aa8.24□□□□□ -1.09
CASC4-210ENST00000559550 ZSCAN1Q8NBB4 408 aa8.24□□□□□ -1.09
CASC4-210ENST00000559550 MSS51Q4VC12 460 aa8.23□□□□□ -1.09
CASC4-210ENST00000559550 TESPA1A2RU30 521 aaPredicted RBP8.22□□□□□ -1.09
CASC4-210ENST00000559550 ZBTB24O43167 697 aaPredicted RBP8.22□□□□□ -1.09
CASC4-210ENST00000559550 OATP04181 439 aa8.22□□□□□ -1.09
CASC4-210ENST00000559550 ATP6V1AP38606 617 aa8.22□□□□□ -1.09
CASC4-210ENST00000559550 TRIM32Q13049 653 aa8.22□□□□□ -1.09
CASC4-210ENST00000559550 RSPH4AQ5TD94 716 aa8.22□□□□□ -1.09
CASC4-210ENST00000559550 METTL3Q86U44 580 aaKnown RBP8.22□□□□□ -1.09
CASC4-210ENST00000559550 NXF1Q9UBU9 619 aaKnown RBP8.22□□□□□ -1.09
CASC4-210ENST00000559550 NUTM2FA1L443 756 aa8.2□□□□□ -1.1
CASC4-210ENST00000559550 SLC16A10Q8TF71 515 aa8.2□□□□□ -1.1
CASC4-210ENST00000559550 FCHSD2O94868 740 aa8.19□□□□□ -1.1
CASC4-210ENST00000559550 RNF19BQ6ZMZ0 732 aa8.19□□□□□ -1.1
CASC4-210ENST00000559550 KRTAP4-8Q9BYQ9 185 aa8.19□□□□□ -1.1
CASC4-210ENST00000559550 NPAS3Q8IXF0 933 aa8.18□□□□□ -1.1
CASC4-210ENST00000559550 BCANQ96GW7 911 aa8.18□□□□□ -1.1
CASC4-210ENST00000559550 DAXXQ9UER7 740 aaPredicted RBP8.18□□□□□ -1.1
CASC4-210ENST00000559550 GCGRP47871 477 aa8.17□□□□□ -1.1
CASC4-210ENST00000559550 MMP16P51512 607 aa8.17□□□□□ -1.1
CASC4-210ENST00000559550 FECHP22830 423 aa8.16□□□□□ -1.1
CASC4-210ENST00000559550 SKOR1P84550 965 aa8.16□□□□□ -1.1
CASC4-210ENST00000559550 RDH13Q8NBN7 331 aa8.16□□□□□ -1.1
CASC4-210ENST00000559550 IRF7Q92985 503 aa8.16□□□□□ -1.1
CASC4-210ENST00000559550 ERBB4Q15303 1308 aa8.15□□□□□ -1.1
CASC4-210ENST00000559550 H3BM21 787 aa8.15□□□□□ -1.1
CASC4-210ENST00000559550 RBM26Q5T8P6 1007 aaKnown RBP8.15□□□□□ -1.1
CASC4-210ENST00000559550 TRIM46Q7Z4K8 759 aa8.15□□□□□ -1.1
CASC4-210ENST00000559550 REPIN1Q9BWE0 567 aaKnown RBP8.15□□□□□ -1.1
CASC4-210ENST00000559550 DDX11L8A8MPP1 907 aa8.13□□□□□ -1.11
CASC4-210ENST00000559550 VEGFBP49765 207 aa8.13□□□□□ -1.11
CASC4-210ENST00000559550 RC3H1Q5TC82 1133 aaKnown RBP8.13□□□□□ -1.11
CASC4-210ENST00000559550 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.11□□□□□ -1.11
CASC4-210ENST00000559550 DXOO77932 396 aaKnown RBP8.11□□□□□ -1.11
CASC4-210ENST00000559550 GSK3AP49840 483 aa8.11□□□□□ -1.11
CASC4-210ENST00000559550 HIC1Q14526 733 aa8.11□□□□□ -1.11
CASC4-210ENST00000559550 SMYD5Q6GMV2 418 aa8.11□□□□□ -1.11
CASC4-210ENST00000559550 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.11□□□□□ -1.11
CASC4-210ENST00000559550 BMP1P13497 986 aa8.1□□□□□ -1.11
CASC4-210ENST00000559550 NLRP7Q8WX94 980 aa8.1□□□□□ -1.11
CASC4-210ENST00000559550 SIAH2O43255 324 aa8.09□□□□□ -1.11
CASC4-210ENST00000559550 WNT7BP56706 349 aa8.09□□□□□ -1.11
CASC4-210ENST00000559550 PHOX2BQ99453 314 aa8.08□□□□□ -1.12
CASC4-210ENST00000559550 TULP1O00294 542 aaPredicted RBP8.06□□□□□ -1.12
CASC4-210ENST00000559550 ALDH1A1P00352 501 aa8.06□□□□□ -1.12
CASC4-210ENST00000559550 KCNMA1Q12791 1236 aa8.06□□□□□ -1.12
CASC4-210ENST00000559550 XP32Q5T750 250 aa8.06□□□□□ -1.12
CASC4-210ENST00000559550 SULF1Q8IWU6 871 aa8.06□□□□□ -1.12
CASC4-210ENST00000559550 KRTAP9-2Q9BYQ4 174 aa8.06□□□□□ -1.12
CASC4-210ENST00000559550 GPR37O15354 613 aa8.05□□□□□ -1.12
CASC4-210ENST00000559550 Q3C1V9 767 aa8.05□□□□□ -1.12
CASC4-210ENST00000559550 CAPN5O15484 640 aaPredicted RBP8.04□□□□□ -1.12
CASC4-210ENST00000559550 GRIPAP1Q4V328 841 aa8.04□□□□□ -1.12
CASC4-210ENST00000559550 USB1Q9BQ65 265 aaKnown RBP8.04□□□□□ -1.12
CASC4-210ENST00000559550 KRTAP9-6A0A140TA67 174 aa8.03□□□□□ -1.12
CASC4-210ENST00000559550 GNPATO15228 680 aa8.03□□□□□ -1.12
CASC4-210ENST00000559550 VSIG8P0DPA2 414 aa8.03□□□□□ -1.12
CASC4-210ENST00000559550 KCTD17Q8N5Z5 321 aa8.03□□□□□ -1.12
CASC4-210ENST00000559550 GPIHBP1Q8IV16 184 aa8.02□□□□□ -1.13
CASC4-210ENST00000559550 CCDC24Q8N4L8 307 aa8.02□□□□□ -1.13
CASC4-210ENST00000559550 ZFP42Q96MM3 310 aa8.02□□□□□ -1.13
CASC4-210ENST00000559550 ZC3H15Q8WU90 426 aaKnown RBP7.99□□□□□ -1.13
CASC4-210ENST00000559550 CD46P15529 392 aa7.98□□□□□ -1.13
CASC4-210ENST00000559550 PTCRAQ6ISU1 281 aaPredicted RBP7.98□□□□□ -1.13
CASC4-210ENST00000559550 KRTAP1-3Q8IUG1 177 aa7.98□□□□□ -1.13
CASC4-210ENST00000559550 HLA-CQ95604 372 aa7.98□□□□□ -1.13
CASC4-210ENST00000559550 EHBP1Q8NDI1 1231 aa7.96□□□□□ -1.14
CASC4-210ENST00000559550 WASF2Q9Y6W5 498 aa7.96□□□□□ -1.14
CASC4-210ENST00000559550 JUNDP17535 347 aa7.95□□□□□ -1.14
CASC4-210ENST00000559550 SOBPA7XYQ1 873 aa7.94□□□□□ -1.14
CASC4-210ENST00000559550 KDM4AO75164 1064 aa7.94□□□□□ -1.14
CASC4-210ENST00000559550 ZMYND10O75800 440 aa7.94□□□□□ -1.14
CASC4-210ENST00000559550 SH3BP2P78314 561 aa7.94□□□□□ -1.14
CASC4-210ENST00000559550 MRPL14Q6P1L8 145 aaKnown RBP7.93□□□□□ -1.14
CASC4-210ENST00000559550 BARGINQ6ZT62 677 aa7.92□□□□□ -1.14
CASC4-210ENST00000559550 RASSF7Q02833 373 aa7.91□□□□□ -1.14
CASC4-210ENST00000559550 TPRNQ4KMQ1 711 aa7.91□□□□□ -1.14
CASC4-210ENST00000559550 TMEM151AQ8N4L1 468 aa7.91□□□□□ -1.14
CASC4-210ENST00000559550 NUDT12Q9BQG2 462 aa7.91□□□□□ -1.14
CASC4-210ENST00000559550 HOXA2O43364 376 aa7.9□□□□□ -1.14
CASC4-210ENST00000559550 GDF11O95390 407 aa7.9□□□□□ -1.14
CASC4-210ENST00000559550 PRKCSHP14314 528 aaPredicted RBP7.9□□□□□ -1.14
CASC4-210ENST00000559550 SYMPKQ92797 1274 aaKnown RBP7.9□□□□□ -1.14
CASC4-210ENST00000559550 PURBQ96QR8 312 aaKnown RBP7.9□□□□□ -1.14
CASC4-210ENST00000559550 KLF16Q9BXK1 252 aaPredicted RBP7.9□□□□□ -1.14
CASC4-210ENST00000559550 TLL2Q9Y6L7 1015 aa7.9□□□□□ -1.14
CASC4-210ENST00000559550 TIMP2P16035 220 aa7.89□□□□□ -1.15
CASC4-210ENST00000559550 USP46P62068 366 aa7.89□□□□□ -1.15
CASC4-210ENST00000559550 GUCA2AQ02747 115 aa7.89□□□□□ -1.15
CASC4-210ENST00000559550 MPNDQ8N594 471 aa7.89□□□□□ -1.15
CASC4-210ENST00000559550 MAP2K5Q13163 448 aa7.88□□□□□ -1.15
CASC4-210ENST00000559550 IRF6O14896 467 aa7.87□□□□□ -1.15
CASC4-210ENST00000559550 PPFIA3O75145 1194 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms