RNA–Protein interactions for RNA: ENST00000559422.1

LRRC49-216, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 727 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-216ENST00000559422 NUTM2EB1AL46 878 aaPredicted RBP12.61□□□□□ -0.39
LRRC49-216ENST00000559422 NR1I2O75469 434 aa12.61□□□□□ -0.39
LRRC49-216ENST00000559422 MTMR2Q13614 643 aa12.61□□□□□ -0.39
LRRC49-216ENST00000559422 NUTM2DQ5VT03 806 aaPredicted RBP12.61□□□□□ -0.39
LRRC49-216ENST00000559422 NUTM2AQ8IVF1 878 aaPredicted RBP12.61□□□□□ -0.39
LRRC49-216ENST00000559422 SALL2Q9Y467 1007 aaPredicted RBP12.61□□□□□ -0.39
LRRC49-216ENST00000559422 SCUBE3Q8IX30 993 aa12.6□□□□□ -0.39
LRRC49-216ENST00000559422 CABLES1Q8TDN4 633 aa12.6□□□□□ -0.39
LRRC49-216ENST00000559422 TMEM259Q4ZIN3 620 aa12.59□□□□□ -0.39
LRRC49-216ENST00000559422 RTL5Q5HYW3 569 aaPredicted RBP12.59□□□□□ -0.39
LRRC49-216ENST00000559422 BLOC1S3Q6QNY0 202 aa12.59□□□□□ -0.39
LRRC49-216ENST00000559422 RNF166Q96A37 237 aaPredicted RBP12.59□□□□□ -0.39
LRRC49-216ENST00000559422 C6orf229H3BNL8 230 aa12.58□□□□□ -0.4
LRRC49-216ENST00000559422 FLIIQ13045 1269 aa12.58□□□□□ -0.4
LRRC49-216ENST00000559422 BANK1Q8NDB2 785 aa12.57□□□□□ -0.4
LRRC49-216ENST00000559422 HCSTQ9UBK5 93 aa12.57□□□□□ -0.4
LRRC49-216ENST00000559422 BRICD5Q6PL45 260 aa12.56□□□□□ -0.4
LRRC49-216ENST00000559422 RETREG3Q86VR2 466 aa12.55□□□□□ -0.4
LRRC49-216ENST00000559422 SYMPKQ92797 1274 aaKnown RBP12.55□□□□□ -0.4
LRRC49-216ENST00000559422 FMNL1O95466 1100 aaPredicted RBP12.54□□□□□ -0.4
LRRC49-216ENST00000559422 THAP11Q96EK4 314 aa12.54□□□□□ -0.4
LRRC49-216ENST00000559422 COPS2P61201 443 aa12.53□□□□□ -0.4
LRRC49-216ENST00000559422 RNF19BQ6ZMZ0 732 aa12.53□□□□□ -0.4
LRRC49-216ENST00000559422 MTRQ99707 1265 aa12.52□□□□□ -0.41
LRRC49-216ENST00000559422 USB1Q9BQ65 265 aaKnown RBP12.52□□□□□ -0.41
LRRC49-216ENST00000559422 ZPR1O75312 459 aa12.51□□□□□ -0.41
LRRC49-216ENST00000559422 TJAP1Q5JTD0 557 aa12.51□□□□□ -0.41
LRRC49-216ENST00000559422 IL21Q9HBE4 155 aa12.51□□□□□ -0.41
LRRC49-216ENST00000559422 CFAP99D6REC4 459 aa12.5□□□□□ -0.41
LRRC49-216ENST00000559422 PRR7Q8TB68 274 aa12.5□□□□□ -0.41
LRRC49-216ENST00000559422 AP1G2O75843 785 aa12.49□□□□□ -0.41
LRRC49-216ENST00000559422 MCM6Q14566 821 aa12.49□□□□□ -0.41
LRRC49-216ENST00000559422 DESI1Q6ICB0 168 aa12.49□□□□□ -0.41
LRRC49-216ENST00000559422 C14orf37Q86TY3 774 aa12.49□□□□□ -0.41
LRRC49-216ENST00000559422 HELBQ8NG08 1087 aaPredicted RBP12.49□□□□□ -0.41
LRRC49-216ENST00000559422 TIMELESSQ9UNS1 1208 aa12.49□□□□□ -0.41
LRRC49-216ENST00000559422 SPSB2Q99619 263 aa12.48□□□□□ -0.41
LRRC49-216ENST00000559422 SOCS7O14512 581 aa12.47□□□□□ -0.41
LRRC49-216ENST00000559422 MMRN1Q13201 1228 aa12.47□□□□□ -0.41
LRRC49-216ENST00000559422 MSS51Q4VC12 460 aa12.46□□□□□ -0.41
LRRC49-216ENST00000559422 USP17L8P0C7I0 530 aa12.45□□□□□ -0.42
LRRC49-216ENST00000559422 CTDSPL2Q05D32 466 aa12.45□□□□□ -0.42
LRRC49-216ENST00000559422 SNRKQ9NRH2 765 aa12.45□□□□□ -0.42
LRRC49-216ENST00000559422 ADH1BP00325 375 aa12.44□□□□□ -0.42
LRRC49-216ENST00000559422 TSC1Q92574 1164 aa12.44□□□□□ -0.42
LRRC49-216ENST00000559422 ZNF516Q92618 1163 aa12.44□□□□□ -0.42
LRRC49-216ENST00000559422 FAM160A2Q8N612 972 aaPredicted RBP12.43□□□□□ -0.42
LRRC49-216ENST00000559422 TLL1O43897 1013 aa12.41□□□□□ -0.42
LRRC49-216ENST00000559422 ITGBL1O95965 494 aaPredicted RBP12.41□□□□□ -0.42
LRRC49-216ENST00000559422 JUNDP17535 347 aa12.41□□□□□ -0.42
LRRC49-216ENST00000559422 LYPD8Q6UX82 237 aa12.41□□□□□ -0.42
LRRC49-216ENST00000559422 APBB1O00213 710 aa12.4□□□□□ -0.42
LRRC49-216ENST00000559422 MTMR14Q8NCE2 650 aa12.4□□□□□ -0.42
LRRC49-216ENST00000559422 UBTFP17480 764 aaKnown RBP12.39□□□□□ -0.43
LRRC49-216ENST00000559422 MMP16P51512 607 aa12.39□□□□□ -0.43
LRRC49-216ENST00000559422 KCNC4Q03721 635 aa12.39□□□□□ -0.43
LRRC49-216ENST00000559422 DXOO77932 396 aaKnown RBP12.38□□□□□ -0.43
LRRC49-216ENST00000559422 PER1O15534 1290 aaPredicted RBP12.37□□□□□ -0.43
LRRC49-216ENST00000559422 LRRN4Q8WUT4 740 aa12.37□□□□□ -0.43
LRRC49-216ENST00000559422 ZMYND15Q9H091 742 aa12.37□□□□□ -0.43
LRRC49-216ENST00000559422 PTPRNQ16849 979 aa12.36□□□□□ -0.43
LRRC49-216ENST00000559422 SLC6A16Q9GZN6 736 aa12.36□□□□□ -0.43
LRRC49-216ENST00000559422 NKX2-3Q8TAU0 364 aa12.35□□□□□ -0.43
LRRC49-216ENST00000559422 GJD4Q96KN9 370 aaPredicted RBP12.35□□□□□ -0.43
LRRC49-216ENST00000559422 PRM3Q9NNZ6 103 aa12.35□□□□□ -0.43
LRRC49-216ENST00000559422 HMX1Q9NP08 348 aaPredicted RBP12.34□□□□□ -0.43
LRRC49-216ENST00000559422 PRDM9Q9NQV7 894 aa12.34□□□□□ -0.43
LRRC49-216ENST00000559422 A6NJR5 290 aa12.33□□□□□ -0.44
LRRC49-216ENST00000559422 RAD21O60216 631 aa12.32□□□□□ -0.44
LRRC49-216ENST00000559422 TRIM34Q9BYJ4 488 aa12.32□□□□□ -0.44
LRRC49-216ENST00000559422 COG6Q9Y2V7 657 aa12.31□□□□□ -0.44
LRRC49-216ENST00000559422 F12P00748 615 aaPredicted RBP12.3□□□□□ -0.44
LRRC49-216ENST00000559422 CCNYL3P0C7X3 344 aa12.3□□□□□ -0.44
LRRC49-216ENST00000559422 CLUAP1Q96AJ1 413 aa12.3□□□□□ -0.44
LRRC49-216ENST00000559422 NUDT12Q9BQG2 462 aa12.3□□□□□ -0.44
LRRC49-216ENST00000559422 EVA1BQ9NVM1 165 aa12.3□□□□□ -0.44
LRRC49-216ENST00000559422 NDUFB9Q9Y6M9 179 aa12.3□□□□□ -0.44
LRRC49-216ENST00000559422 S1PR4O95977 384 aa12.29□□□□□ -0.44
LRRC49-216ENST00000559422 POM121Q96HA1 1249 aa12.29□□□□□ -0.44
LRRC49-216ENST00000559422 NR6A1Q15406 480 aa12.28□□□□□ -0.44
LRRC49-216ENST00000559422 IFFO2Q5TF58 517 aa12.27□□□□□ -0.45
LRRC49-216ENST00000559422 GDPD2Q9HCC8 539 aa12.27□□□□□ -0.45
LRRC49-216ENST00000559422 KCNH2Q12809 1159 aa12.26□□□□□ -0.45
LRRC49-216ENST00000559422 EPS8L1Q8TE68 723 aa12.26□□□□□ -0.45
LRRC49-216ENST00000559422 GGCXP38435 758 aa12.25□□□□□ -0.45
LRRC49-216ENST00000559422 PNMA1Q8ND90 353 aa12.25□□□□□ -0.45
LRRC49-216ENST00000559422 TBC1D2BQ9UPU7 963 aa12.25□□□□□ -0.45
LRRC49-216ENST00000559422 CTHP32929 405 aa12.24□□□□□ -0.45
LRRC49-216ENST00000559422 MAP10Q9P2G4 905 aa12.24□□□□□ -0.45
LRRC49-216ENST00000559422 PROSER2Q86WR7 435 aaPredicted RBP12.23□□□□□ -0.45
LRRC49-216ENST00000559422 FNBP4Q8N3X1 1017 aaPredicted RBP12.23□□□□□ -0.45
LRRC49-216ENST00000559422 CCDC24Q8N4L8 307 aa12.22□□□□□ -0.45
LRRC49-216ENST00000559422 FCF1Q9Y324 198 aaKnown RBP12.22□□□□□ -0.45
LRRC49-216ENST00000559422 TRAK2O60296 914 aa12.21□□□□□ -0.45
LRRC49-216ENST00000559422 GPR37L1O60883 481 aa12.21□□□□□ -0.45
LRRC49-216ENST00000559422 ABL2P42684 1182 aa12.21□□□□□ -0.45
LRRC49-216ENST00000559422 WWC1Q8IX03 1113 aa12.21□□□□□ -0.45
LRRC49-216ENST00000559422 ARMC2Q8NEN0 867 aa12.21□□□□□ -0.45
LRRC49-216ENST00000559422 RNF223E7ERA6 249 aa12.2□□□□□ -0.46
LRRC49-216ENST00000559422 PPP1R18Q6NYC8 613 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms