RNA–Protein interactions for RNA: ENST00000559328.5

MARK3-219, Transcript of microtubule affinity regulating kinase 3, human

TSL 4

Gene MARK3, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-219	ENST00000559328	QRICH2	Q9H0J4	1663 aa		29.1	■■■□□ 2.25
MARK3-219	ENST00000559328	C19orf44	Q9H6X5	657 aa		29.08	■■■□□ 2.25
MARK3-219	ENST00000559328	EIF3A	Q14152	1382 aa	Known RBP	29.08	■■■□□ 2.25
MARK3-219	ENST00000559328	CENPJ	Q9HC77	1338 aa	Predicted RBP	29.06	■■■□□ 2.24
MARK3-219	ENST00000559328	DCC	P43146	1447 aa		29.04	■■■□□ 2.24
MARK3-219	ENST00000559328	CDC42BPG	Q6DT37	1551 aa		29.04	■■■□□ 2.24
MARK3-219	ENST00000559328	ADGRB2	O60241	1585 aa		29.03	■■■□□ 2.24
MARK3-219	ENST00000559328	MINK1	Q8N4C8	1332 aa	Predicted RBP	29.02	■■■□□ 2.24
MARK3-219	ENST00000559328	USP47	Q96K76	1375 aa		29.01	■■■□□ 2.24
MARK3-219	ENST00000559328	ATF3	P18847	181 aa		29.01	■■■□□ 2.23
MARK3-219	ENST00000559328	CADPS2	Q86UW7	1296 aa		29	■■■□□ 2.23
MARK3-219	ENST00000559328	HIRIP3	Q9BW71	556 aa	Predicted RBP	28.99	■■■□□ 2.23
MARK3-219	ENST00000559328	FMN2	Q9NZ56	1722 aa		28.99	■■■□□ 2.23
MARK3-219	ENST00000559328	UBAP1L	F5GYI3	381 aa		28.98	■■■□□ 2.23
MARK3-219	ENST00000559328	ZEB1	P37275	1124 aa	Predicted RBP	28.98	■■■□□ 2.23
MARK3-219	ENST00000559328	TOM1	O60784	492 aa		28.97	■■■□□ 2.23
MARK3-219	ENST00000559328	ST20-MTHFS	A0A0A6YYL1	179 aa		28.94	■■■□□ 2.22
MARK3-219	ENST00000559328	MST1R	Q04912	1400 aa		28.93	■■■□□ 2.22
MARK3-219	ENST00000559328	RGPD8	O14715	1765 aa	Predicted RBP	28.93	■■■□□ 2.22
MARK3-219	ENST00000559328	SBNO2	Q9Y2G9	1366 aa		28.91	■■■□□ 2.22
MARK3-219	ENST00000559328	WASL	O00401	505 aa	Predicted RBP	28.91	■■■□□ 2.22
MARK3-219	ENST00000559328	SLAIN2	Q9P270	581 aa		28.91	■■■□□ 2.22
MARK3-219	ENST00000559328	EIF4G2	P78344	907 aa	Known RBP eCLIP	28.9	■■■□□ 2.22
MARK3-219	ENST00000559328	TULP4	Q9NRJ4	1543 aa		28.89	■■■□□ 2.22
MARK3-219	ENST00000559328	USP32	Q8NFA0	1604 aa		28.87	■■■□□ 2.21
MARK3-219	ENST00000559328	C1orf167	Q5SNV9	1468 aa		28.87	■■■□□ 2.21
MARK3-219	ENST00000559328	NUTM2F	A1L443	756 aa		28.87	■■■□□ 2.21
MARK3-219	ENST00000559328	CDK19	Q9BWU1	502 aa		28.87	■■■□□ 2.21
MARK3-219	ENST00000559328	HSPA5	P11021	654 aa	Known RBP	28.86	■■■□□ 2.21
MARK3-219	ENST00000559328	PIP4K2B	P78356	416 aa		28.86	■■■□□ 2.21
MARK3-219	ENST00000559328	TESK2	Q96S53	571 aa		28.86	■■■□□ 2.21
MARK3-219	ENST00000559328	ROBO1	Q9Y6N7	1651 aa		28.86	■■■□□ 2.21
MARK3-219	ENST00000559328	EVC2	Q86UK5	1308 aa		28.85	■■■□□ 2.21
MARK3-219	ENST00000559328	SCAF1	Q9H7N4	1312 aa	Known RBP	28.84	■■■□□ 2.21
MARK3-219	ENST00000559328	ANKAR	Q7Z5J8	1434 aa		28.83	■■■□□ 2.21
MARK3-219	ENST00000559328	FBXO41	Q8TF61	875 aa		28.82	■■■□□ 2.2
MARK3-219	ENST00000559328	ITSN1	Q15811	1721 aa		28.82	■■■□□ 2.2
MARK3-219	ENST00000559328	SLC24A1	O60721	1099 aa		28.8	■■■□□ 2.2
MARK3-219	ENST00000559328	SRPK2	P78362	688 aa	Known RBP	28.8	■■■□□ 2.2
MARK3-219	ENST00000559328	ATP7B	P35670	1465 aa		28.79	■■■□□ 2.2
MARK3-219	ENST00000559328	PRR36	Q9H6K5	1346 aa		28.79	■■■□□ 2.2
MARK3-219	ENST00000559328	CABP2	Q9NPB3	220 aa		28.79	■■■□□ 2.2
MARK3-219	ENST00000559328	TOPAZ1	Q8N9V7	1692 aa		28.78	■■■□□ 2.2
MARK3-219	ENST00000559328	ORAI2	Q96SN7	254 aa		28.78	■■■□□ 2.2
MARK3-219	ENST00000559328	ESCO1	Q5FWF5	840 aa		28.77	■■■□□ 2.2
MARK3-219	ENST00000559328	BRINP3	Q76B58	766 aa		28.77	■■■□□ 2.2
MARK3-219	ENST00000559328	NUDT16	Q96DE0	195 aa	Known RBP	28.77	■■■□□ 2.2
MARK3-219	ENST00000559328	TMF1	P82094	1093 aa		28.76	■■■□□ 2.19
MARK3-219	ENST00000559328	KIF1A	Q12756	1690 aa		28.76	■■■□□ 2.19
MARK3-219	ENST00000559328	DISP3	Q9P2K9	1392 aa		28.75	■■■□□ 2.19
MARK3-219	ENST00000559328	NHSL1	Q5SYE7	1610 aa		28.72	■■■□□ 2.19
MARK3-219	ENST00000559328	PHF8	Q9UPP1	1060 aa		28.71	■■■□□ 2.19
MARK3-219	ENST00000559328	CCDC61	Q9Y6R9	512 aa		28.71	■■■□□ 2.19
MARK3-219	ENST00000559328	PUS7	Q96PZ0	661 aa	Known RBP	28.69	■■■□□ 2.18
MARK3-219	ENST00000559328	ATAD2	Q6PL18	1390 aa		28.69	■■■□□ 2.18
MARK3-219	ENST00000559328	PHLPP1	O60346	1717 aa		28.69	■■■□□ 2.18
MARK3-219	ENST00000559328	AHDC1	Q5TGY3	1603 aa	Predicted RBP	28.69	■■■□□ 2.18
MARK3-219	ENST00000559328	PMFBP1	Q8TBY8	1022 aa		28.68	■■■□□ 2.18
MARK3-219	ENST00000559328	PPIP5K1	Q6PFW1	1433 aa		28.68	■■■□□ 2.18
MARK3-219	ENST00000559328	CDCA8	Q53HL2	280 aa		28.66	■■■□□ 2.18
MARK3-219	ENST00000559328	FOXO3	O43524	673 aa		28.64	■■■□□ 2.18
MARK3-219	ENST00000559328	DDX17	Q92841	729 aa	Known RBP	28.64	■■■□□ 2.18
MARK3-219	ENST00000559328	PLEKHG3	A1L390	1219 aa		28.63	■■■□□ 2.17
MARK3-219	ENST00000559328	CABP1	Q9NZU7	370 aa		28.63	■■■□□ 2.17
MARK3-219	ENST00000559328	NPHP3	Q7Z494	1330 aa		28.62	■■■□□ 2.17
MARK3-219	ENST00000559328	COL16A1	Q07092	1604 aa	Predicted RBP	28.61	■■■□□ 2.17
MARK3-219	ENST00000559328	AKAP12	Q02952	1782 aa		28.6	■■■□□ 2.17
MARK3-219	ENST00000559328	NGDN	Q8NEJ9	315 aa	Known RBP	28.6	■■■□□ 2.17
MARK3-219	ENST00000559328	MYOM1	P52179	1685 aa		28.59	■■■□□ 2.17
MARK3-219	ENST00000559328	C11orf95	C9JLR9	678 aa	Predicted RBP	28.59	■■■□□ 2.17
MARK3-219	ENST00000559328	HSPA1L	P34931	641 aa		28.59	■■■□□ 2.17
MARK3-219	ENST00000559328	ACE	P12821	1306 aa		28.59	■■■□□ 2.17
MARK3-219	ENST00000559328	POLR3A	O14802	1390 aa	Predicted RBP	28.59	■■■□□ 2.17
MARK3-219	ENST00000559328	TMC1	Q8TDI8	760 aa		28.58	■■■□□ 2.17
MARK3-219	ENST00000559328	PXDN	Q92626	1479 aa		28.58	■■■□□ 2.17
MARK3-219	ENST00000559328	XPC	Q01831	940 aa	Predicted RBP	28.56	■■■□□ 2.16
MARK3-219	ENST00000559328	PSME1	Q06323	249 aa		28.56	■■■□□ 2.16
MARK3-219	ENST00000559328	SOS2	Q07890	1332 aa	Predicted RBP	28.56	■■■□□ 2.16
MARK3-219	ENST00000559328	POLR3GL	Q9BT43	218 aa		28.56	■■■□□ 2.16
MARK3-219	ENST00000559328	SLC12A5	Q9H2X9	1139 aa		28.56	■■■□□ 2.16
MARK3-219	ENST00000559328	NINL	Q9Y2I6	1382 aa		28.55	■■■□□ 2.16
MARK3-219	ENST00000559328	KRT28	Q7Z3Y7	464 aa		28.55	■■■□□ 2.16
MARK3-219	ENST00000559328	ILDR1	Q86SU0	546 aa	Predicted RBP	28.54	■■■□□ 2.16
MARK3-219	ENST00000559328	TRPM3	Q9HCF6	1732 aa	Predicted RBP	28.54	■■■□□ 2.16
MARK3-219	ENST00000559328	MON2	Q7Z3U7	1717 aa		28.52	■■■□□ 2.16
MARK3-219	ENST00000559328	CD163L1	Q9NR16	1453 aa		28.52	■■■□□ 2.16
MARK3-219	ENST00000559328	KIF7	Q2M1P5	1343 aa		28.51	■■■□□ 2.15
MARK3-219	ENST00000559328	CPSF1	Q10570	1443 aa	Known RBP	28.5	■■■□□ 2.15
MARK3-219	ENST00000559328	LRRC59	Q96AG4	307 aa	Known RBP	28.48	■■■□□ 2.15
MARK3-219	ENST00000559328	ZNF692	Q9BU19	519 aa	Predicted RBP	28.48	■■■□□ 2.15
MARK3-219	ENST00000559328	USP6	P35125	1406 aa		28.48	■■■□□ 2.15
MARK3-219	ENST00000559328	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	28.47	■■■□□ 2.15
MARK3-219	ENST00000559328	TERF2IP	Q9NYB0	399 aa		28.47	■■■□□ 2.15
MARK3-219	ENST00000559328	CCDC7	Q96M83	1385 aa		28.47	■■■□□ 2.15
MARK3-219	ENST00000559328	ALS2	Q96Q42	1657 aa		28.46	■■■□□ 2.15
MARK3-219	ENST00000559328		A0A1W2PP64	1363 aa		28.46	■■■□□ 2.15
MARK3-219	ENST00000559328	SBNO1	A3KN83	1393 aa		28.46	■■■□□ 2.15
MARK3-219	ENST00000559328	KTN1	Q86UP2	1357 aa	Known RBP	28.46	■■■□□ 2.15
MARK3-219	ENST00000559328	NRK	Q7Z2Y5	1582 aa		28.45	■■■□□ 2.15
MARK3-219	ENST00000559328	WASHC2A	Q641Q2	1341 aa		28.45	■■■□□ 2.15

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