RNA–Protein interactions for RNA: ENST00000559240.5

PBX1-215, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 2,866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-215ENST00000559240 PUS7Q96PZ0 661 aaKnown RBP22.54■■□□□ 1.2
PBX1-215ENST00000559240 HIRIP3Q9BW71 556 aaPredicted RBP22.54■■□□□ 1.2
PBX1-215ENST00000559240 C11orf95C9JLR9 678 aaPredicted RBP22.54■■□□□ 1.2
PBX1-215ENST00000559240 ADGRB2O60241 1585 aa22.53■■□□□ 1.2
PBX1-215ENST00000559240 TMF1P82094 1093 aa22.52■■□□□ 1.2
PBX1-215ENST00000559240 PTPRUQ92729 1446 aa22.51■■□□□ 1.19
PBX1-215ENST00000559240 DISP3Q9P2K9 1392 aa22.5■■□□□ 1.19
PBX1-215ENST00000559240 DEKP35659 375 aaKnown RBP22.5■■□□□ 1.19
PBX1-215ENST00000559240 CDCA8Q53HL2 280 aa22.5■■□□□ 1.19
PBX1-215ENST00000559240 MSH5O43196 834 aa22.5■■□□□ 1.19
PBX1-215ENST00000559240 TRAK1Q9UPV9 953 aa22.5■■□□□ 1.19
PBX1-215ENST00000559240 STRCQ7RTU9 1775 aa22.49■■□□□ 1.19
PBX1-215ENST00000559240 RBM19Q9Y4C8 960 aaKnown RBP22.49■■□□□ 1.19
PBX1-215ENST00000559240 TULP4Q9NRJ4 1543 aa22.48■■□□□ 1.19
PBX1-215ENST00000559240 MYOM1P52179 1685 aa22.48■■□□□ 1.19
PBX1-215ENST00000559240 BCANQ96GW7 911 aa22.46■■□□□ 1.19
PBX1-215ENST00000559240 DAXXQ9UER7 740 aaPredicted RBP22.43■■□□□ 1.18
PBX1-215ENST00000559240 PKNOX2Q96KN3 472 aa22.42■■□□□ 1.18
PBX1-215ENST00000559240 ROBO2Q9HCK4 1378 aa22.42■■□□□ 1.18
PBX1-215ENST00000559240 SLC26A8Q96RN1 970 aa22.41■■□□□ 1.18
PBX1-215ENST00000559240 PRAM1Q96QH2 718 aa22.41■■□□□ 1.18
PBX1-215ENST00000559240 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.41■■□□□ 1.18
PBX1-215ENST00000559240 NKTRP30414 1462 aaKnown RBP22.41■■□□□ 1.18
PBX1-215ENST00000559240 NCKAP5LQ9HCH0 1330 aa22.4■■□□□ 1.18
PBX1-215ENST00000559240 STK26Q9P289 416 aa22.4■■□□□ 1.18
PBX1-215ENST00000559240 EVC2Q86UK5 1308 aa22.4■■□□□ 1.18
PBX1-215ENST00000559240 NINLQ9Y2I6 1382 aa22.39■■□□□ 1.18
PBX1-215ENST00000559240 AMOTL2Q9Y2J4 779 aa22.38■■□□□ 1.17
PBX1-215ENST00000559240 PLEKHH1Q9ULM0 1364 aa22.37■■□□□ 1.17
PBX1-215ENST00000559240 DDX10Q13206 875 aaKnown RBP22.37■■□□□ 1.17
PBX1-215ENST00000559240 POGKQ9P215 609 aa22.37■■□□□ 1.17
PBX1-215ENST00000559240 KCNA6P17658 529 aa22.35■■□□□ 1.17
PBX1-215ENST00000559240 ATAD2Q6PL18 1390 aa22.34■■□□□ 1.17
PBX1-215ENST00000559240 NCOA3Q9Y6Q9 1424 aa22.34■■□□□ 1.17
PBX1-215ENST00000559240 TOPAZ1Q8N9V7 1692 aa22.33■■□□□ 1.17
PBX1-215ENST00000559240 CDC42BPGQ6DT37 1551 aa22.33■■□□□ 1.17
PBX1-215ENST00000559240 USP32Q8NFA0 1604 aa22.31■■□□□ 1.16
PBX1-215ENST00000559240 WAPLQ7Z5K2 1190 aa22.31■■□□□ 1.16
PBX1-215ENST00000559240 NALCNQ8IZF0 1738 aa22.31■■□□□ 1.16
PBX1-215ENST00000559240 STRCP1A6NGW2 1772 aa22.31■■□□□ 1.16
PBX1-215ENST00000559240 RTN4Q9NQC3 1192 aaKnown RBP22.3■■□□□ 1.16
PBX1-215ENST00000559240 SENP3Q9H4L4 574 aaPredicted RBP22.3■■□□□ 1.16
PBX1-215ENST00000559240 FMN2Q9NZ56 1722 aa22.29■■□□□ 1.16
PBX1-215ENST00000559240 HSPA2P54652 639 aa22.29■■□□□ 1.16
PBX1-215ENST00000559240 PODXL2Q9NZ53 605 aa22.29■■□□□ 1.16
PBX1-215ENST00000559240 ITSN1Q15811 1721 aa22.28■■□□□ 1.16
PBX1-215ENST00000559240 WASLO00401 505 aaPredicted RBP22.27■■□□□ 1.16
PBX1-215ENST00000559240 MINK1Q8N4C8 1332 aaPredicted RBP22.27■■□□□ 1.16
PBX1-215ENST00000559240 ADGRL3Q9HAR2 1447 aa22.26■■□□□ 1.15
PBX1-215ENST00000559240 ATP7BP35670 1465 aa22.26■■□□□ 1.15
PBX1-215ENST00000559240 ANKARQ7Z5J8 1434 aa22.26■■□□□ 1.15
PBX1-215ENST00000559240 KTN1Q86UP2 1357 aaKnown RBP22.26■■□□□ 1.15
PBX1-215ENST00000559240 NPC1L1Q9UHC9 1359 aa22.26■■□□□ 1.15
PBX1-215ENST00000559240 DMRT2Q9Y5R5 561 aa22.24■■□□□ 1.15
PBX1-215ENST00000559240 PER1O15534 1290 aaPredicted RBP22.24■■□□□ 1.15
PBX1-215ENST00000559240 CDK19Q9BWU1 502 aa22.24■■□□□ 1.15
PBX1-215ENST00000559240 ANKRD36BQ8N2N9 1353 aa22.23■■□□□ 1.15
PBX1-215ENST00000559240 ERICH6BQ5W0A0 696 aa22.22■■□□□ 1.15
PBX1-215ENST00000559240 AKAP12Q02952 1782 aa22.22■■□□□ 1.15
PBX1-215ENST00000559240 SAFB2Q14151 953 aaKnown RBP eCLIP22.21■■□□□ 1.15
PBX1-215ENST00000559240 CD163L1Q9NR16 1453 aa22.21■■□□□ 1.15
PBX1-215ENST00000559240 DCCP43146 1447 aa22.21■■□□□ 1.15
PBX1-215ENST00000559240 MON2Q7Z3U7 1717 aa22.19■■□□□ 1.14
PBX1-215ENST00000559240 PANK3Q9H999 370 aa22.19■■□□□ 1.14
PBX1-215ENST00000559240 XIRP1Q702N8 1843 aaKnown RBP22.18■■□□□ 1.14
PBX1-215ENST00000559240 CABP2Q9NPB3 220 aa22.18■■□□□ 1.14
PBX1-215ENST00000559240 SRPK2P78362 688 aaKnown RBP22.18■■□□□ 1.14
PBX1-215ENST00000559240 IL27Q8NEV9 243 aa22.17■■□□□ 1.14
PBX1-215ENST00000559240 POLR3GLQ9BT43 218 aa22.17■■□□□ 1.14
PBX1-215ENST00000559240 CPSF1Q10570 1443 aaKnown RBP22.17■■□□□ 1.14
PBX1-215ENST00000559240 ANP32CO43423 234 aa22.16■■□□□ 1.14
PBX1-215ENST00000559240 PPIP5K1Q6PFW1 1433 aa22.14■■□□□ 1.13
PBX1-215ENST00000559240 NRKQ7Z2Y5 1582 aa22.14■■□□□ 1.13
PBX1-215ENST00000559240 ANKRD26Q9UPS8 1709 aa22.14■■□□□ 1.13
PBX1-215ENST00000559240 CCDC61Q9Y6R9 512 aa22.13■■□□□ 1.13
PBX1-215ENST00000559240 NUDT16Q96DE0 195 aaKnown RBP22.13■■□□□ 1.13
PBX1-215ENST00000559240 PARD3Q8TEW0 1356 aa22.13■■□□□ 1.13
PBX1-215ENST00000559240 PRR36Q9H6K5 1346 aa22.13■■□□□ 1.13
PBX1-215ENST00000559240 PLEKHG3A1L390 1219 aa22.13■■□□□ 1.13
PBX1-215ENST00000559240 CCER2I3L3R5 266 aa22.13■■□□□ 1.13
PBX1-215ENST00000559240 LRRC7Q96NW7 1537 aa22.12■■□□□ 1.13
PBX1-215ENST00000559240 NSD2O96028 1365 aa22.12■■□□□ 1.13
PBX1-215ENST00000559240 PRKRIP1Q9H875 184 aaPredicted RBP22.12■■□□□ 1.13
PBX1-215ENST00000559240 SLC12A5Q9H2X9 1139 aa22.12■■□□□ 1.13
PBX1-215ENST00000559240 TERF2IPQ9NYB0 399 aa22.11■■□□□ 1.13
PBX1-215ENST00000559240 A0A1W2PP64 1363 aa22.11■■□□□ 1.13
PBX1-215ENST00000559240 AMER1Q5JTC6 1135 aaPredicted RBP22.1■■□□□ 1.13
PBX1-215ENST00000559240 RGPD8O14715 1765 aaPredicted RBP22.1■■□□□ 1.13
PBX1-215ENST00000559240 POLR3AO14802 1390 aaPredicted RBP22.1■■□□□ 1.13
PBX1-215ENST00000559240 RALBP1Q15311 655 aa22.1■■□□□ 1.13
PBX1-215ENST00000559240 CARD14Q9BXL6 1004 aa22.1■■□□□ 1.13
PBX1-215ENST00000559240 KIF20BQ96Q89 1820 aa22.09■■□□□ 1.13
PBX1-215ENST00000559240 KIF1AQ12756 1690 aa22.09■■□□□ 1.13
PBX1-215ENST00000559240 PROSER2Q86WR7 435 aaPredicted RBP22.09■■□□□ 1.13
PBX1-215ENST00000559240 KNSTRNQ9Y448 316 aa22.09■■□□□ 1.13
PBX1-215ENST00000559240 TMEM94Q12767 1356 aa22.08■■□□□ 1.13
PBX1-215ENST00000559240 NSD3Q9BZ95 1437 aa22.08■■□□□ 1.13
PBX1-215ENST00000559240 BRD4O60885 1362 aaPredicted RBP22.08■■□□□ 1.12
PBX1-215ENST00000559240 EDC4Q6P2E9 1401 aaKnown RBP22.07■■□□□ 1.12
PBX1-215ENST00000559240 C19orf44Q9H6X5 657 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms