RNA–Protein interactions for RNA: ENST00000559143.1

MFGE8-209, Transcript of milk fat globule-EGF factor 8 protein, humanhuman

TSL 3

Gene MFGE8, Length 358 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MFGE8-209ENST00000559143 NBPF1Q3BBV0 1214 aa13.22□□□□□ -0.29
MFGE8-209ENST00000559143 PRAM1Q96QH2 718 aa13.22□□□□□ -0.29
MFGE8-209ENST00000559143 TRAK1Q9UPV9 953 aa13.22□□□□□ -0.29
MFGE8-209ENST00000559143 ARHGEF28Q8N1W1 1705 aaKnown RBP13.22□□□□□ -0.29
MFGE8-209ENST00000559143 PLEKHH1Q9ULM0 1364 aa13.21□□□□□ -0.29
MFGE8-209ENST00000559143 WAPLQ7Z5K2 1190 aa13.21□□□□□ -0.29
MFGE8-209ENST00000559143 SLAIN2Q9P270 581 aa13.21□□□□□ -0.29
MFGE8-209ENST00000559143 MST1RQ04912 1400 aa13.21□□□□□ -0.3
MFGE8-209ENST00000559143 EIF3AQ14152 1382 aaKnown RBP13.2□□□□□ -0.3
MFGE8-209ENST00000559143 POGKQ9P215 609 aa13.2□□□□□ -0.3
MFGE8-209ENST00000559143 ILDR1Q86SU0 546 aaPredicted RBP13.19□□□□□ -0.3
MFGE8-209ENST00000559143 SBNO2Q9Y2G9 1366 aa13.18□□□□□ -0.3
MFGE8-209ENST00000559143 C1orf167Q5SNV9 1468 aa13.17□□□□□ -0.3
MFGE8-209ENST00000559143 ANKARQ7Z5J8 1434 aa13.17□□□□□ -0.3
MFGE8-209ENST00000559143 CENPJQ9HC77 1338 aaPredicted RBP13.16□□□□□ -0.3
MFGE8-209ENST00000559143 PIP4K2BP78356 416 aa13.16□□□□□ -0.3
MFGE8-209ENST00000559143 CARD11Q9BXL7 1154 aa13.16□□□□□ -0.3
MFGE8-209ENST00000559143 ROBO1Q9Y6N7 1651 aa13.15□□□□□ -0.3
MFGE8-209ENST00000559143 SLC24A1O60721 1099 aa13.15□□□□□ -0.3
MFGE8-209ENST00000559143 FMN2Q9NZ56 1722 aa13.15□□□□□ -0.3
MFGE8-209ENST00000559143 AHDC1Q5TGY3 1603 aaPredicted RBP13.14□□□□□ -0.31
MFGE8-209ENST00000559143 BRINP3Q76B58 766 aa13.14□□□□□ -0.31
MFGE8-209ENST00000559143 SCAF1Q9H7N4 1312 aaKnown RBP13.13□□□□□ -0.31
MFGE8-209ENST00000559143 TULP4Q9NRJ4 1543 aa13.13□□□□□ -0.31
MFGE8-209ENST00000559143 WASLO00401 505 aaPredicted RBP13.13□□□□□ -0.31
MFGE8-209ENST00000559143 SAFB2Q14151 953 aaKnown RBP eCLIP13.12□□□□□ -0.31
MFGE8-209ENST00000559143 MINK1Q8N4C8 1332 aaPredicted RBP13.12□□□□□ -0.31
MFGE8-209ENST00000559143 QRICH2Q9H0J4 1663 aa13.11□□□□□ -0.31
MFGE8-209ENST00000559143 KIF1AQ12756 1690 aa13.1□□□□□ -0.31
MFGE8-209ENST00000559143 NHSL1Q5SYE7 1610 aa13.1□□□□□ -0.31
MFGE8-209ENST00000559143 HSPA1LP34931 641 aa13.09□□□□□ -0.31
MFGE8-209ENST00000559143 PUS7Q96PZ0 661 aaKnown RBP13.09□□□□□ -0.31
MFGE8-209ENST00000559143 ATP7BP35670 1465 aa13.09□□□□□ -0.31
MFGE8-209ENST00000559143 NPHP3Q7Z494 1330 aa13.09□□□□□ -0.31
MFGE8-209ENST00000559143 EVC2Q86UK5 1308 aa13.09□□□□□ -0.31
MFGE8-209ENST00000559143 USP47Q96K76 1375 aa13.08□□□□□ -0.31
MFGE8-209ENST00000559143 ORAI2Q96SN7 254 aa13.08□□□□□ -0.32
MFGE8-209ENST00000559143 HIRIP3Q9BW71 556 aaPredicted RBP13.08□□□□□ -0.32
MFGE8-209ENST00000559143 USP32Q8NFA0 1604 aa13.08□□□□□ -0.32
MFGE8-209ENST00000559143 SOS2Q07890 1332 aaPredicted RBP13.08□□□□□ -0.32
MFGE8-209ENST00000559143 COL16A1Q07092 1604 aaPredicted RBP13.07□□□□□ -0.32
MFGE8-209ENST00000559143 ESCO1Q5FWF5 840 aa13.07□□□□□ -0.32
MFGE8-209ENST00000559143 CDK19Q9BWU1 502 aa13.07□□□□□ -0.32
MFGE8-209ENST00000559143 PHLPP1O60346 1717 aa13.06□□□□□ -0.32
MFGE8-209ENST00000559143 TESK2Q96S53 571 aa13.06□□□□□ -0.32
MFGE8-209ENST00000559143 PHF8Q9UPP1 1060 aa13.06□□□□□ -0.32
MFGE8-209ENST00000559143 CCDC61Q9Y6R9 512 aa13.06□□□□□ -0.32
MFGE8-209ENST00000559143 PRR36Q9H6K5 1346 aa13.06□□□□□ -0.32
MFGE8-209ENST00000559143 ATAD2Q6PL18 1390 aa13.06□□□□□ -0.32
MFGE8-209ENST00000559143 ITSN1Q15811 1721 aa13.05□□□□□ -0.32
MFGE8-209ENST00000559143 NUDT16Q96DE0 195 aaKnown RBP13.05□□□□□ -0.32
MFGE8-209ENST00000559143 TOPAZ1Q8N9V7 1692 aa13.05□□□□□ -0.32
MFGE8-209ENST00000559143 JCADQ9P266 1359 aa13.05□□□□□ -0.32
MFGE8-209ENST00000559143 ST20-MTHFSA0A0A6YYL1 179 aa13.04□□□□□ -0.32
MFGE8-209ENST00000559143 PLEKHG3A1L390 1219 aa13.04□□□□□ -0.32
MFGE8-209ENST00000559143 LRRC59Q96AG4 307 aaKnown RBP13.04□□□□□ -0.32
MFGE8-209ENST00000559143 POLR3AO14802 1390 aaPredicted RBP13.04□□□□□ -0.32
MFGE8-209ENST00000559143 PXDNQ92626 1479 aa13.04□□□□□ -0.32
MFGE8-209ENST00000559143 NUTM2FA1L443 756 aa13.03□□□□□ -0.32
MFGE8-209ENST00000559143 SRPK2P78362 688 aaKnown RBP13.03□□□□□ -0.32
MFGE8-209ENST00000559143 BRD4O60885 1362 aaPredicted RBP13.03□□□□□ -0.32
MFGE8-209ENST00000559143 SBNO1A3KN83 1393 aa13.02□□□□□ -0.33
MFGE8-209ENST00000559143 NINLQ9Y2I6 1382 aa13.02□□□□□ -0.33
MFGE8-209ENST00000559143 FOXO3O43524 673 aa13.01□□□□□ -0.33
MFGE8-209ENST00000559143 EIF4G2P78344 907 aaKnown RBP eCLIP13.01□□□□□ -0.33
MFGE8-209ENST00000559143 PSME1Q06323 249 aa13.01□□□□□ -0.33
MFGE8-209ENST00000559143 SPATA31A6Q5VVP1 1343 aa13.01□□□□□ -0.33
MFGE8-209ENST00000559143 SHPRHQ149N8 1683 aa13.01□□□□□ -0.33
MFGE8-209ENST00000559143 RGPD8O14715 1765 aaPredicted RBP13□□□□□ -0.33
MFGE8-209ENST00000559143 PPIP5K1Q6PFW1 1433 aa13□□□□□ -0.33
MFGE8-209ENST00000559143 TMF1P82094 1093 aa13□□□□□ -0.33
MFGE8-209ENST00000559143 CDCA8Q53HL2 280 aa13□□□□□ -0.33
MFGE8-209ENST00000559143 CABP2Q9NPB3 220 aa13□□□□□ -0.33
MFGE8-209ENST00000559143 PNPLA6Q8IY17 1366 aa12.99□□□□□ -0.33
MFGE8-209ENST00000559143 TNS3Q68CZ2 1445 aa12.98□□□□□ -0.33
MFGE8-209ENST00000559143 SPATA31A3Q5VYP0 1347 aa12.98□□□□□ -0.33
MFGE8-209ENST00000559143 KRT28Q7Z3Y7 464 aa12.98□□□□□ -0.33
MFGE8-209ENST00000559143 NGDNQ8NEJ9 315 aaKnown RBP12.98□□□□□ -0.33
MFGE8-209ENST00000559143 PMFBP1Q8TBY8 1022 aa12.98□□□□□ -0.33
MFGE8-209ENST00000559143 DDX17Q92841 729 aaKnown RBP12.98□□□□□ -0.33
MFGE8-209ENST00000559143 ARHGEF10O15013 1369 aa12.97□□□□□ -0.33
MFGE8-209ENST00000559143 ACEP12821 1306 aa12.97□□□□□ -0.33
MFGE8-209ENST00000559143 ZNF692Q9BU19 519 aaPredicted RBP12.97□□□□□ -0.33
MFGE8-209ENST00000559143 COL22A1Q8NFW1 1626 aaPredicted RBP12.97□□□□□ -0.33
MFGE8-209ENST00000559143 CPSF1Q10570 1443 aaKnown RBP12.96□□□□□ -0.33
MFGE8-209ENST00000559143 TRPM3Q9HCF6 1732 aaPredicted RBP12.96□□□□□ -0.34
MFGE8-209ENST00000559143 HSPA5P11021 654 aaKnown RBP12.95□□□□□ -0.34
MFGE8-209ENST00000559143 CABP1Q9NZU7 370 aa12.95□□□□□ -0.34
MFGE8-209ENST00000559143 USP6P35125 1406 aa12.95□□□□□ -0.34
MFGE8-209ENST00000559143 DISP3Q9P2K9 1392 aa12.94□□□□□ -0.34
MFGE8-209ENST00000559143 ZEB1P37275 1124 aaPredicted RBP12.94□□□□□ -0.34
MFGE8-209ENST00000559143 SSH2Q76I76 1423 aa12.94□□□□□ -0.34
MFGE8-209ENST00000559143 MED1Q15648 1581 aaPredicted RBP12.93□□□□□ -0.34
MFGE8-209ENST00000559143 ALS2Q96Q42 1657 aa12.93□□□□□ -0.34
MFGE8-209ENST00000559143 XPCQ01831 940 aaPredicted RBP12.92□□□□□ -0.34
MFGE8-209ENST00000559143 TERF2IPQ9NYB0 399 aa12.92□□□□□ -0.34
MFGE8-209ENST00000559143 CD163L1Q9NR16 1453 aa12.91□□□□□ -0.34
MFGE8-209ENST00000559143 TTC21AQ8NDW8 1320 aa12.91□□□□□ -0.34
MFGE8-209ENST00000559143 HDGFL2Q7Z4V5 671 aaPredicted RBP12.91□□□□□ -0.34
MFGE8-209ENST00000559143 AKAP12Q02952 1782 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms