RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 HSPA1LP34931 641 aa17.63■□□□□ 0.41
GABPB1-208ENST00000558970 PRAM1Q96QH2 718 aa17.63■□□□□ 0.41
GABPB1-208ENST00000558970 POGKQ9P215 609 aa17.63■□□□□ 0.41
GABPB1-208ENST00000558970 GPRASP1Q5JY77 1395 aa17.62■□□□□ 0.41
GABPB1-208ENST00000558970 MINK1Q8N4C8 1332 aaPredicted RBP17.59■□□□□ 0.41
GABPB1-208ENST00000558970 HIRIP3Q9BW71 556 aaPredicted RBP17.59■□□□□ 0.41
GABPB1-208ENST00000558970 FAM135BQ49AJ0 1406 aa17.58■□□□□ 0.41
GABPB1-208ENST00000558970 EIF3AQ14152 1382 aaKnown RBP17.58■□□□□ 0.4
GABPB1-208ENST00000558970 USP47Q96K76 1375 aa17.58■□□□□ 0.4
GABPB1-208ENST00000558970 CENPJQ9HC77 1338 aaPredicted RBP17.57■□□□□ 0.4
GABPB1-208ENST00000558970 PIP4K2BP78356 416 aa17.57■□□□□ 0.4
GABPB1-208ENST00000558970 RGPD8O14715 1765 aaPredicted RBP17.57■□□□□ 0.4
GABPB1-208ENST00000558970 ADGRL3Q9HAR2 1447 aa17.56■□□□□ 0.4
GABPB1-208ENST00000558970 ZEB1P37275 1124 aaPredicted RBP17.56■□□□□ 0.4
GABPB1-208ENST00000558970 MSH6P52701 1360 aa17.55■□□□□ 0.4
GABPB1-208ENST00000558970 SCAF1Q9H7N4 1312 aaKnown RBP17.55■□□□□ 0.4
GABPB1-208ENST00000558970 FMN2Q9NZ56 1722 aa17.55■□□□□ 0.4
GABPB1-208ENST00000558970 NUTM2FA1L443 756 aa17.54■□□□□ 0.4
GABPB1-208ENST00000558970 ADGRB2O60241 1585 aa17.53■□□□□ 0.4
GABPB1-208ENST00000558970 CDC42BPGQ6DT37 1551 aa17.53■□□□□ 0.4
GABPB1-208ENST00000558970 ST20-MTHFSA0A0A6YYL1 179 aa17.52■□□□□ 0.4
GABPB1-208ENST00000558970 SIRT1Q96EB6 747 aa17.51■□□□□ 0.39
GABPB1-208ENST00000558970 MED1Q15648 1581 aaPredicted RBP17.5■□□□□ 0.39
GABPB1-208ENST00000558970 NCOA3Q9Y6Q9 1424 aa17.5■□□□□ 0.39
GABPB1-208ENST00000558970 HSPA5P11021 654 aaKnown RBP17.5■□□□□ 0.39
GABPB1-208ENST00000558970 ATF3P18847 181 aa17.5■□□□□ 0.39
GABPB1-208ENST00000558970 TULP4Q9NRJ4 1543 aa17.5■□□□□ 0.39
GABPB1-208ENST00000558970 EIF4G2P78344 907 aaKnown RBP eCLIP17.49■□□□□ 0.39
GABPB1-208ENST00000558970 C19orf44Q9H6X5 657 aa17.49■□□□□ 0.39
GABPB1-208ENST00000558970 USP32Q8NFA0 1604 aa17.49■□□□□ 0.39
GABPB1-208ENST00000558970 ITSN1Q15811 1721 aa17.47■□□□□ 0.39
GABPB1-208ENST00000558970 ROBO1Q9Y6N7 1651 aa17.46■□□□□ 0.39
GABPB1-208ENST00000558970 DCCP43146 1447 aa17.46■□□□□ 0.39
GABPB1-208ENST00000558970 SRPK2P78362 688 aaKnown RBP17.45■□□□□ 0.38
GABPB1-208ENST00000558970 MST1RQ04912 1400 aa17.45■□□□□ 0.38
GABPB1-208ENST00000558970 WASLO00401 505 aaPredicted RBP17.44■□□□□ 0.38
GABPB1-208ENST00000558970 CADPS2Q86UW7 1296 aa17.44■□□□□ 0.38
GABPB1-208ENST00000558970 PHF23Q9BUL5 403 aaPredicted RBP17.44■□□□□ 0.38
GABPB1-208ENST00000558970 CDK19Q9BWU1 502 aa17.44■□□□□ 0.38
GABPB1-208ENST00000558970 CABP2Q9NPB3 220 aa17.44■□□□□ 0.38
GABPB1-208ENST00000558970 TOPAZ1Q8N9V7 1692 aa17.43■□□□□ 0.38
GABPB1-208ENST00000558970 TESK2Q96S53 571 aa17.43■□□□□ 0.38
GABPB1-208ENST00000558970 POLR3GLQ9BT43 218 aa17.43■□□□□ 0.38
GABPB1-208ENST00000558970 EVC2Q86UK5 1308 aa17.43■□□□□ 0.38
GABPB1-208ENST00000558970 SLAIN2Q9P270 581 aa17.41■□□□□ 0.38
GABPB1-208ENST00000558970 ATP7BP35670 1465 aa17.41■□□□□ 0.38
GABPB1-208ENST00000558970 C1orf167Q5SNV9 1468 aa17.41■□□□□ 0.38
GABPB1-208ENST00000558970 SBNO2Q9Y2G9 1366 aa17.4■□□□□ 0.38
GABPB1-208ENST00000558970 PRR36Q9H6K5 1346 aa17.4■□□□□ 0.38
GABPB1-208ENST00000558970 TMF1P82094 1093 aa17.39■□□□□ 0.37
GABPB1-208ENST00000558970 ESCO1Q5FWF5 840 aa17.39■□□□□ 0.37
GABPB1-208ENST00000558970 ORAI2Q96SN7 254 aa17.39■□□□□ 0.37
GABPB1-208ENST00000558970 KIF1AQ12756 1690 aa17.38■□□□□ 0.37
GABPB1-208ENST00000558970 MYOM1P52179 1685 aa17.37■□□□□ 0.37
GABPB1-208ENST00000558970 PMFBP1Q8TBY8 1022 aa17.37■□□□□ 0.37
GABPB1-208ENST00000558970 NUDT16Q96DE0 195 aaKnown RBP17.37■□□□□ 0.37
GABPB1-208ENST00000558970 PHLPP1O60346 1717 aa17.37■□□□□ 0.37
GABPB1-208ENST00000558970 DDX17Q92841 729 aaKnown RBP17.36■□□□□ 0.37
GABPB1-208ENST00000558970 PPIP5K1Q6PFW1 1433 aa17.36■□□□□ 0.37
GABPB1-208ENST00000558970 ANKARQ7Z5J8 1434 aa17.36■□□□□ 0.37
GABPB1-208ENST00000558970 NHSL1Q5SYE7 1610 aa17.36■□□□□ 0.37
GABPB1-208ENST00000558970 BRINP3Q76B58 766 aa17.34■□□□□ 0.37
GABPB1-208ENST00000558970 AKAP12Q02952 1782 aa17.33■□□□□ 0.37
GABPB1-208ENST00000558970 C11orf95C9JLR9 678 aaPredicted RBP17.33■□□□□ 0.36
GABPB1-208ENST00000558970 TMC1Q8TDI8 760 aa17.33■□□□□ 0.36
GABPB1-208ENST00000558970 PHF8Q9UPP1 1060 aa17.33■□□□□ 0.36
GABPB1-208ENST00000558970 XPCQ01831 940 aaPredicted RBP17.32■□□□□ 0.36
GABPB1-208ENST00000558970 RGS17Q9UGC6 210 aaPredicted RBP17.32■□□□□ 0.36
GABPB1-208ENST00000558970 ATAD2Q6PL18 1390 aa17.31■□□□□ 0.36
GABPB1-208ENST00000558970 CABP1Q9NZU7 370 aa17.31■□□□□ 0.36
GABPB1-208ENST00000558970 FOXO3O43524 673 aa17.3■□□□□ 0.36
GABPB1-208ENST00000558970 NGDNQ8NEJ9 315 aaKnown RBP17.3■□□□□ 0.36
GABPB1-208ENST00000558970 CCDC61Q9Y6R9 512 aa17.3■□□□□ 0.36
GABPB1-208ENST00000558970 KIF7Q2M1P5 1343 aa17.28■□□□□ 0.36
GABPB1-208ENST00000558970 MON2Q7Z3U7 1717 aa17.28■□□□□ 0.36
GABPB1-208ENST00000558970 SLC24A1O60721 1099 aa17.28■□□□□ 0.36
GABPB1-208ENST00000558970 CDCA8Q53HL2 280 aa17.28■□□□□ 0.36
GABPB1-208ENST00000558970 AHDC1Q5TGY3 1603 aaPredicted RBP17.28■□□□□ 0.36
GABPB1-208ENST00000558970 ACEP12821 1306 aa17.27■□□□□ 0.36
GABPB1-208ENST00000558970 SLC12A5Q9H2X9 1139 aa17.27■□□□□ 0.36
GABPB1-208ENST00000558970 COL16A1Q07092 1604 aaPredicted RBP17.27■□□□□ 0.36
GABPB1-208ENST00000558970 TRPM3Q9HCF6 1732 aaPredicted RBP17.27■□□□□ 0.35
GABPB1-208ENST00000558970 WASHC2AQ641Q2 1341 aa17.25■□□□□ 0.35
GABPB1-208ENST00000558970 PLEKHG5O94827 1062 aa17.25■□□□□ 0.35
GABPB1-208ENST00000558970 PSME1Q06323 249 aa17.25■□□□□ 0.35
GABPB1-208ENST00000558970 CCDC7Q96M83 1385 aa17.25■□□□□ 0.35
GABPB1-208ENST00000558970 PXDNQ92626 1479 aa17.24■□□□□ 0.35
GABPB1-208ENST00000558970 NPHP3Q7Z494 1330 aa17.24■□□□□ 0.35
GABPB1-208ENST00000558970 NRKQ7Z2Y5 1582 aa17.24■□□□□ 0.35
GABPB1-208ENST00000558970 CD163L1Q9NR16 1453 aa17.24■□□□□ 0.35
GABPB1-208ENST00000558970 PAK3O75914 559 aaPredicted RBP17.23■□□□□ 0.35
GABPB1-208ENST00000558970 KRT28Q7Z3Y7 464 aa17.23■□□□□ 0.35
GABPB1-208ENST00000558970 A0A1W2PP64 1363 aa17.23■□□□□ 0.35
GABPB1-208ENST00000558970 PLEKHG3A1L390 1219 aa17.22■□□□□ 0.35
GABPB1-208ENST00000558970 LMOD2Q6P5Q4 547 aa17.22■□□□□ 0.35
GABPB1-208ENST00000558970 POLR3AO14802 1390 aaPredicted RBP17.22■□□□□ 0.35
GABPB1-208ENST00000558970 KTN1Q86UP2 1357 aaKnown RBP17.22■□□□□ 0.35
GABPB1-208ENST00000558970 KIF20BQ96Q89 1820 aa17.21■□□□□ 0.35
GABPB1-208ENST00000558970 HDGFL2Q7Z4V5 671 aaPredicted RBP17.21■□□□□ 0.35
GABPB1-208ENST00000558970 PUS7Q96PZ0 661 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms