RNA–Protein interactions for RNA: ENST00000558886.1

NEO1-205, Transcript of neogenin 1, humanhuman

TSL 2

Gene NEO1, Length 543 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-205ENST00000558886 PTCH1Q13635 1447 aa14.68□□□□□ -0.06
NEO1-205ENST00000558886 FAM135BQ49AJ0 1406 aa14.68□□□□□ -0.06
NEO1-205ENST00000558886 NWD1Q149M9 1564 aa14.68□□□□□ -0.06
NEO1-205ENST00000558886 C19orf44Q9H6X5 657 aa14.67□□□□□ -0.06
NEO1-205ENST00000558886 USP47Q96K76 1375 aa14.67□□□□□ -0.06
NEO1-205ENST00000558886 MINK1Q8N4C8 1332 aaPredicted RBP14.66□□□□□ -0.06
NEO1-205ENST00000558886 DLC1Q96QB1 1528 aa14.66□□□□□ -0.06
NEO1-205ENST00000558886 XRN1Q8IZH2 1706 aaKnown RBP14.66□□□□□ -0.06
NEO1-205ENST00000558886 PLEKHH1Q9ULM0 1364 aa14.66□□□□□ -0.06
NEO1-205ENST00000558886 ST20-MTHFSA0A0A6YYL1 179 aa14.66□□□□□ -0.06
NEO1-205ENST00000558886 SLC24A1O60721 1099 aa14.66□□□□□ -0.06
NEO1-205ENST00000558886 ATF3P18847 181 aa14.66□□□□□ -0.06
NEO1-205ENST00000558886 MSH6P52701 1360 aa14.65□□□□□ -0.06
NEO1-205ENST00000558886 HIRIP3Q9BW71 556 aaPredicted RBP14.65□□□□□ -0.06
NEO1-205ENST00000558886 NCOA3Q9Y6Q9 1424 aa14.65□□□□□ -0.06
NEO1-205ENST00000558886 HSPA5P11021 654 aaKnown RBP14.64□□□□□ -0.07
NEO1-205ENST00000558886 KNDC1Q76NI1 1749 aa14.63□□□□□ -0.07
NEO1-205ENST00000558886 CADPS2Q86UW7 1296 aa14.62□□□□□ -0.07
NEO1-205ENST00000558886 ILDR2Q71H61 639 aa14.61□□□□□ -0.07
NEO1-205ENST00000558886 EVC2Q86UK5 1308 aa14.61□□□□□ -0.07
NEO1-205ENST00000558886 ADGRL3Q9HAR2 1447 aa14.6□□□□□ -0.07
NEO1-205ENST00000558886 WASLO00401 505 aaPredicted RBP14.6□□□□□ -0.07
NEO1-205ENST00000558886 SRPK2P78362 688 aaKnown RBP14.6□□□□□ -0.07
NEO1-205ENST00000558886 TMF1P82094 1093 aa14.6□□□□□ -0.07
NEO1-205ENST00000558886 CDK19Q9BWU1 502 aa14.6□□□□□ -0.07
NEO1-205ENST00000558886 ARHGEF28Q8N1W1 1705 aaKnown RBP14.6□□□□□ -0.07
NEO1-205ENST00000558886 NUTM2FA1L443 756 aa14.59□□□□□ -0.07
NEO1-205ENST00000558886 CDCA8Q53HL2 280 aa14.58□□□□□ -0.08
NEO1-205ENST00000558886 POLR3GLQ9BT43 218 aa14.57□□□□□ -0.08
NEO1-205ENST00000558886 SLAIN2Q9P270 581 aa14.57□□□□□ -0.08
NEO1-205ENST00000558886 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.56□□□□□ -0.08
NEO1-205ENST00000558886 TESK2Q96S53 571 aa14.56□□□□□ -0.08
NEO1-205ENST00000558886 CABP2Q9NPB3 220 aa14.56□□□□□ -0.08
NEO1-205ENST00000558886 QRICH2Q9H0J4 1663 aa14.55□□□□□ -0.08
NEO1-205ENST00000558886 SBNO2Q9Y2G9 1366 aa14.55□□□□□ -0.08
NEO1-205ENST00000558886 ESCO1Q5FWF5 840 aa14.54□□□□□ -0.08
NEO1-205ENST00000558886 NUDT16Q96DE0 195 aaKnown RBP14.54□□□□□ -0.08
NEO1-205ENST00000558886 DCCP43146 1447 aa14.54□□□□□ -0.08
NEO1-205ENST00000558886 MED1Q15648 1581 aaPredicted RBP14.54□□□□□ -0.08
NEO1-205ENST00000558886 ROBO1Q9Y6N7 1651 aa14.54□□□□□ -0.08
NEO1-205ENST00000558886 NALCNQ8IZF0 1738 aa14.52□□□□□ -0.08
NEO1-205ENST00000558886 TMC1Q8TDI8 760 aa14.52□□□□□ -0.09
NEO1-205ENST00000558886 CCDC61Q9Y6R9 512 aa14.52□□□□□ -0.09
NEO1-205ENST00000558886 PUS7Q96PZ0 661 aaKnown RBP14.51□□□□□ -0.09
NEO1-205ENST00000558886 CDC42BPGQ6DT37 1551 aa14.51□□□□□ -0.09
NEO1-205ENST00000558886 ADGRB2O60241 1585 aa14.5□□□□□ -0.09
NEO1-205ENST00000558886 ATAD2Q6PL18 1390 aa14.49□□□□□ -0.09
NEO1-205ENST00000558886 NGDNQ8NEJ9 315 aaKnown RBP14.49□□□□□ -0.09
NEO1-205ENST00000558886 ORAI2Q96SN7 254 aa14.49□□□□□ -0.09
NEO1-205ENST00000558886 PHF8Q9UPP1 1060 aa14.49□□□□□ -0.09
NEO1-205ENST00000558886 ANKARQ7Z5J8 1434 aa14.49□□□□□ -0.09
NEO1-205ENST00000558886 SOCS7O14512 581 aa14.48□□□□□ -0.09
NEO1-205ENST00000558886 PMFBP1Q8TBY8 1022 aa14.48□□□□□ -0.09
NEO1-205ENST00000558886 CABP1Q9NZU7 370 aa14.48□□□□□ -0.09
NEO1-205ENST00000558886 C1orf167Q5SNV9 1468 aa14.48□□□□□ -0.09
NEO1-205ENST00000558886 MST1RQ04912 1400 aa14.48□□□□□ -0.09
NEO1-205ENST00000558886 PRR36Q9H6K5 1346 aa14.47□□□□□ -0.09
NEO1-205ENST00000558886 TULP4Q9NRJ4 1543 aa14.47□□□□□ -0.09
NEO1-205ENST00000558886 PHLPP1O60346 1717 aa14.46□□□□□ -0.09
NEO1-205ENST00000558886 FMN2Q9NZ56 1722 aa14.46□□□□□ -0.09
NEO1-205ENST00000558886 PSME1Q06323 249 aa14.46□□□□□ -0.09
NEO1-205ENST00000558886 BRINP3Q76B58 766 aa14.46□□□□□ -0.09
NEO1-205ENST00000558886 PLEKHG3A1L390 1219 aa14.45□□□□□ -0.1
NEO1-205ENST00000558886 C11orf95C9JLR9 678 aaPredicted RBP14.45□□□□□ -0.1
NEO1-205ENST00000558886 FOXO3O43524 673 aa14.45□□□□□ -0.1
NEO1-205ENST00000558886 PPIP5K1Q6PFW1 1433 aa14.45□□□□□ -0.1
NEO1-205ENST00000558886 HDGFL2Q7Z4V5 671 aaPredicted RBP14.45□□□□□ -0.1
NEO1-205ENST00000558886 TERF2IPQ9NYB0 399 aa14.45□□□□□ -0.1
NEO1-205ENST00000558886 ZNF316A6NFI3 1004 aaPredicted RBP14.44□□□□□ -0.1
NEO1-205ENST00000558886 SLC12A5Q9H2X9 1139 aa14.44□□□□□ -0.1
NEO1-205ENST00000558886 KIF7Q2M1P5 1343 aa14.43□□□□□ -0.1
NEO1-205ENST00000558886 ZNF692Q9BU19 519 aaPredicted RBP14.43□□□□□ -0.1
NEO1-205ENST00000558886 ACEP12821 1306 aa14.42□□□□□ -0.1
NEO1-205ENST00000558886 NPHP3Q7Z494 1330 aa14.42□□□□□ -0.1
NEO1-205ENST00000558886 NINLQ9Y2I6 1382 aa14.42□□□□□ -0.1
NEO1-205ENST00000558886 ATP7BP35670 1465 aa14.42□□□□□ -0.1
NEO1-205ENST00000558886 KRT28Q7Z3Y7 464 aa14.41□□□□□ -0.1
NEO1-205ENST00000558886 CCDC7Q96M83 1385 aa14.41□□□□□ -0.1
NEO1-205ENST00000558886 RGPD8O14715 1765 aaPredicted RBP14.41□□□□□ -0.1
NEO1-205ENST00000558886 WASHC2AQ641Q2 1341 aa14.41□□□□□ -0.1
NEO1-205ENST00000558886 JCADQ9P266 1359 aa14.4□□□□□ -0.1
NEO1-205ENST00000558886 PAK3O75914 559 aaPredicted RBP14.4□□□□□ -0.1
NEO1-205ENST00000558886 XPCQ01831 940 aaPredicted RBP14.4□□□□□ -0.1
NEO1-205ENST00000558886 DDX17Q92841 729 aaKnown RBP14.4□□□□□ -0.1
NEO1-205ENST00000558886 ITSN1Q15811 1721 aa14.39□□□□□ -0.11
NEO1-205ENST00000558886 LMOD2Q6P5Q4 547 aa14.39□□□□□ -0.11
NEO1-205ENST00000558886 COL16A1Q07092 1604 aaPredicted RBP14.39□□□□□ -0.11
NEO1-205ENST00000558886 USP32Q8NFA0 1604 aa14.39□□□□□ -0.11
NEO1-205ENST00000558886 KTN1Q86UP2 1357 aaKnown RBP14.38□□□□□ -0.11
NEO1-205ENST00000558886 PANK3Q9H999 370 aa14.38□□□□□ -0.11
NEO1-205ENST00000558886 RGS17Q9UGC6 210 aaPredicted RBP14.38□□□□□ -0.11
NEO1-205ENST00000558886 KIF1AQ12756 1690 aa14.37□□□□□ -0.11
NEO1-205ENST00000558886 LRRC59Q96AG4 307 aaKnown RBP14.37□□□□□ -0.11
NEO1-205ENST00000558886 AHDC1Q5TGY3 1603 aaPredicted RBP14.37□□□□□ -0.11
NEO1-205ENST00000558886 POLR3AO14802 1390 aaPredicted RBP14.36□□□□□ -0.11
NEO1-205ENST00000558886 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.35□□□□□ -0.11
NEO1-205ENST00000558886 ANKRD36BQ8N2N9 1353 aa14.34□□□□□ -0.11
NEO1-205ENST00000558886 DDX10Q13206 875 aaKnown RBP14.34□□□□□ -0.11
NEO1-205ENST00000558886 MEX3CQ5U5Q3 659 aaKnown RBP14.34□□□□□ -0.11
NEO1-205ENST00000558886 KNSTRNQ9Y448 316 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms