RNA–Protein interactions for RNA: ENST00000558705.1

PKNOX2-209, Transcript of PBX/knotted 1 homeobox 2, humanhuman

TSL 4

Gene PKNOX2, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-209ENST00000558705 WAPLQ7Z5K2 1190 aa20.51■□□□□ 0.87
PKNOX2-209ENST00000558705 TECPR2O15040 1411 aa20.51■□□□□ 0.87
PKNOX2-209ENST00000558705 KNDC1Q76NI1 1749 aa20.5■□□□□ 0.87
PKNOX2-209ENST00000558705 LRPPRCP42704 1394 aaKnown RBP20.5■□□□□ 0.87
PKNOX2-209ENST00000558705 SOS2Q07890 1332 aaPredicted RBP20.5■□□□□ 0.87
PKNOX2-209ENST00000558705 RAB3GAP2Q9H2M9 1393 aa20.49■□□□□ 0.87
PKNOX2-209ENST00000558705 C8orf37Q96NL8 207 aa20.47■□□□□ 0.87
PKNOX2-209ENST00000558705 ABCC11Q96J66 1382 aa20.46■□□□□ 0.87
PKNOX2-209ENST00000558705 NRXN1Q9ULB1 1477 aa20.46■□□□□ 0.87
PKNOX2-209ENST00000558705 YTHDC2Q9H6S0 1430 aaKnown RBP20.45■□□□□ 0.86
PKNOX2-209ENST00000558705 NUTM2FA1L443 756 aa20.45■□□□□ 0.86
PKNOX2-209ENST00000558705 ADAMTS2O95450 1211 aa20.45■□□□□ 0.86
PKNOX2-209ENST00000558705 PXDNQ92626 1479 aa20.44■□□□□ 0.86
PKNOX2-209ENST00000558705 RXRBP28702 533 aa20.44■□□□□ 0.86
PKNOX2-209ENST00000558705 ESCO1Q5FWF5 840 aa20.44■□□□□ 0.86
PKNOX2-209ENST00000558705 FMN2Q9NZ56 1722 aa20.44■□□□□ 0.86
PKNOX2-209ENST00000558705 COL22A1Q8NFW1 1626 aaPredicted RBP20.43■□□□□ 0.86
PKNOX2-209ENST00000558705 XPCQ01831 940 aaPredicted RBP20.43■□□□□ 0.86
PKNOX2-209ENST00000558705 MYOM2P54296 1465 aa20.43■□□□□ 0.86
PKNOX2-209ENST00000558705 CFAP70Q5T0N1 1121 aa20.42■□□□□ 0.86
PKNOX2-209ENST00000558705 C14orf93Q9H972 538 aaKnown RBP20.42■□□□□ 0.86
PKNOX2-209ENST00000558705 RGS12O14924 1447 aa20.4■□□□□ 0.86
PKNOX2-209ENST00000558705 FOXO3O43524 673 aa20.4■□□□□ 0.86
PKNOX2-209ENST00000558705 CDK12Q9NYV4 1490 aaPredicted RBP20.4■□□□□ 0.86
PKNOX2-209ENST00000558705 UPF1Q92900 1129 aaKnown RBP eCLIP20.39■□□□□ 0.85
PKNOX2-209ENST00000558705 QTRT2Q9H974 415 aaKnown RBP20.39■□□□□ 0.85
PKNOX2-209ENST00000558705 RGPD8O14715 1765 aaPredicted RBP20.39■□□□□ 0.85
PKNOX2-209ENST00000558705 NPHP3Q7Z494 1330 aa20.38■□□□□ 0.85
PKNOX2-209ENST00000558705 NGLY1Q96IV0 654 aa20.38■□□□□ 0.85
PKNOX2-209ENST00000558705 ACIN1Q9UKV3 1341 aaKnown RBP20.36■□□□□ 0.85
PKNOX2-209ENST00000558705 MARF1Q9Y4F3 1742 aaKnown RBP20.34■□□□□ 0.85
PKNOX2-209ENST00000558705 RBM6P78332 1123 aaKnown RBP20.34■□□□□ 0.85
PKNOX2-209ENST00000558705 SAFB2Q14151 953 aaKnown RBP eCLIP20.34■□□□□ 0.85
PKNOX2-209ENST00000558705 SIRT1Q96EB6 747 aa20.34■□□□□ 0.85
PKNOX2-209ENST00000558705 KIF1AQ12756 1690 aa20.34■□□□□ 0.85
PKNOX2-209ENST00000558705 ADGRB1O14514 1584 aa20.34■□□□□ 0.85
PKNOX2-209ENST00000558705 DHX57Q6P158 1386 aaKnown RBP20.34■□□□□ 0.85
PKNOX2-209ENST00000558705 PRAM1Q96QH2 718 aa20.32■□□□□ 0.84
PKNOX2-209ENST00000558705 USP21Q9UK80 565 aa20.32■□□□□ 0.84
PKNOX2-209ENST00000558705 FNBP4Q8N3X1 1017 aaPredicted RBP20.31■□□□□ 0.84
PKNOX2-209ENST00000558705 USP32Q8NFA0 1604 aa20.31■□□□□ 0.84
PKNOX2-209ENST00000558705 DLC1Q96QB1 1528 aa20.3■□□□□ 0.84
PKNOX2-209ENST00000558705 ATRNO75882 1429 aa20.29■□□□□ 0.84
PKNOX2-209ENST00000558705 KDM2AQ9Y2K7 1162 aa20.29■□□□□ 0.84
PKNOX2-209ENST00000558705 BCL9LQ86UU0 1499 aa20.29■□□□□ 0.84
PKNOX2-209ENST00000558705 SPATA31A3Q5VYP0 1347 aa20.28■□□□□ 0.84
PKNOX2-209ENST00000558705 KRT28Q7Z3Y7 464 aa20.27■□□□□ 0.84
PKNOX2-209ENST00000558705 ADGRB2O60241 1585 aa20.26■□□□□ 0.83
PKNOX2-209ENST00000558705 DCAF11Q8TEB1 546 aa20.26■□□□□ 0.83
PKNOX2-209ENST00000558705 TRPC5Q9UL62 973 aaPredicted RBP20.26■□□□□ 0.83
PKNOX2-209ENST00000558705 PHF8Q9UPP1 1060 aa20.26■□□□□ 0.83
PKNOX2-209ENST00000558705 TRAK1Q9UPV9 953 aa20.25■□□□□ 0.83
PKNOX2-209ENST00000558705 HIRIP3Q9BW71 556 aaPredicted RBP20.24■□□□□ 0.83
PKNOX2-209ENST00000558705 POGKQ9P215 609 aa20.24■□□□□ 0.83
PKNOX2-209ENST00000558705 TNS3Q68CZ2 1445 aa20.23■□□□□ 0.83
PKNOX2-209ENST00000558705 ABCA3Q99758 1704 aa20.22■□□□□ 0.83
PKNOX2-209ENST00000558705 HRCP23327 699 aa20.22■□□□□ 0.83
PKNOX2-209ENST00000558705 CABLES1Q8TDN4 633 aa20.22■□□□□ 0.83
PKNOX2-209ENST00000558705 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.22■□□□□ 0.83
PKNOX2-209ENST00000558705 PLEKHG5O94827 1062 aa20.21■□□□□ 0.83
PKNOX2-209ENST00000558705 PMFBP1Q8TBY8 1022 aa20.21■□□□□ 0.83
PKNOX2-209ENST00000558705 SLIT2O94813 1529 aa20.21■□□□□ 0.83
PKNOX2-209ENST00000558705 MINK1Q8N4C8 1332 aaPredicted RBP20.21■□□□□ 0.83
PKNOX2-209ENST00000558705 PRR36Q9H6K5 1346 aa20.21■□□□□ 0.83
PKNOX2-209ENST00000558705 ANKARQ7Z5J8 1434 aa20.2■□□□□ 0.82
PKNOX2-209ENST00000558705 ARHGEF28Q8N1W1 1705 aaKnown RBP20.19■□□□□ 0.82
PKNOX2-209ENST00000558705 TRPM3Q9HCF6 1732 aaPredicted RBP20.19■□□□□ 0.82
PKNOX2-209ENST00000558705 GLI3P10071 1580 aa20.19■□□□□ 0.82
PKNOX2-209ENST00000558705 SBNO1A3KN83 1393 aa20.18■□□□□ 0.82
PKNOX2-209ENST00000558705 TULP4Q9NRJ4 1543 aa20.17■□□□□ 0.82
PKNOX2-209ENST00000558705 PLCH1Q4KWH8 1693 aa20.16■□□□□ 0.82
PKNOX2-209ENST00000558705 PSME1Q06323 249 aa20.16■□□□□ 0.82
PKNOX2-209ENST00000558705 GJD4Q96KN9 370 aaPredicted RBP20.16■□□□□ 0.82
PKNOX2-209ENST00000558705 ATAD2Q6PL18 1390 aa20.16■□□□□ 0.82
PKNOX2-209ENST00000558705 LMOD2Q6P5Q4 547 aa20.15■□□□□ 0.82
PKNOX2-209ENST00000558705 UNC5CLQ8IV45 518 aa20.15■□□□□ 0.82
PKNOX2-209ENST00000558705 RALGAPBQ86X10 1494 aa20.15■□□□□ 0.82
PKNOX2-209ENST00000558705 ALS2Q96Q42 1657 aa20.15■□□□□ 0.82
PKNOX2-209ENST00000558705 WASLO00401 505 aaPredicted RBP20.13■□□□□ 0.81
PKNOX2-209ENST00000558705 BRWD3Q6RI45 1802 aa20.11■□□□□ 0.81
PKNOX2-209ENST00000558705 ARHGEF10O15013 1369 aa20.11■□□□□ 0.81
PKNOX2-209ENST00000558705 HAP1P54257 671 aaPredicted RBP20.11■□□□□ 0.81
PKNOX2-209ENST00000558705 STAC3Q96MF2 364 aa20.11■□□□□ 0.81
PKNOX2-209ENST00000558705 NWD2Q9ULI1 1742 aa20.1■□□□□ 0.81
PKNOX2-209ENST00000558705 CRYBG1Q9Y4K1 1723 aa20.1■□□□□ 0.81
PKNOX2-209ENST00000558705 ATP7BP35670 1465 aa20.1■□□□□ 0.81
PKNOX2-209ENST00000558705 EIF3AQ14152 1382 aaKnown RBP20.08■□□□□ 0.81
PKNOX2-209ENST00000558705 NRAPQ86VF7 1730 aa20.08■□□□□ 0.81
PKNOX2-209ENST00000558705 KIAA1210Q9ULL0 1709 aa20.08■□□□□ 0.81
PKNOX2-209ENST00000558705 FAM83GA6ND36 823 aa20.08■□□□□ 0.81
PKNOX2-209ENST00000558705 NBPF1Q3BBV0 1214 aa20.07■□□□□ 0.8
PKNOX2-209ENST00000558705 ITSN1Q15811 1721 aa20.07■□□□□ 0.8
PKNOX2-209ENST00000558705 EP400Q96L91 3159 aa20.06■□□□□ 0.8
PKNOX2-209ENST00000558705 VPS72Q15906 364 aa20.06■□□□□ 0.8
PKNOX2-209ENST00000558705 GPRASP1Q5JY77 1395 aa20.06■□□□□ 0.8
PKNOX2-209ENST00000558705 NUDT16Q96DE0 195 aaKnown RBP20.05■□□□□ 0.8
PKNOX2-209ENST00000558705 TOPAZ1Q8N9V7 1692 aa20.05■□□□□ 0.8
PKNOX2-209ENST00000558705 NGDNQ8NEJ9 315 aaKnown RBP20.04■□□□□ 0.8
PKNOX2-209ENST00000558705 CDK19Q9BWU1 502 aa20.03■□□□□ 0.8
PKNOX2-209ENST00000558705 SEPT12Q8IYM1 358 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms