RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 XRN1Q8IZH2 1706 aaKnown RBP10.53□□□□□ -0.72
LRRC28-207ENST00000558500 APLP2Q06481 763 aa10.52□□□□□ -0.73
LRRC28-207ENST00000558500 ORAI2Q96SN7 254 aa10.51□□□□□ -0.73
LRRC28-207ENST00000558500 FAM50AQ14320 339 aaKnown RBP10.5□□□□□ -0.73
LRRC28-207ENST00000558500 BCL9LQ86UU0 1499 aa10.49□□□□□ -0.73
LRRC28-207ENST00000558500 NRXN3Q9Y4C0 1643 aa10.49□□□□□ -0.73
LRRC28-207ENST00000558500 LOC105371045A0A1W2PR82 267 aa10.49□□□□□ -0.73
LRRC28-207ENST00000558500 GJD4Q96KN9 370 aaPredicted RBP10.49□□□□□ -0.73
LRRC28-207ENST00000558500 BLMP54132 1417 aaPredicted RBP10.49□□□□□ -0.73
LRRC28-207ENST00000558500 ZNF326Q5BKZ1 582 aaKnown RBP10.48□□□□□ -0.73
LRRC28-207ENST00000558500 SAMD1Q6SPF0 538 aaPredicted RBP10.48□□□□□ -0.73
LRRC28-207ENST00000558500 MYOM2P54296 1465 aa10.48□□□□□ -0.73
LRRC28-207ENST00000558500 LAMC1P11047 1609 aa10.47□□□□□ -0.73
LRRC28-207ENST00000558500 E9PCH4 1651 aa10.47□□□□□ -0.73
LRRC28-207ENST00000558500 EP400Q96L91 3159 aa10.46□□□□□ -0.73
LRRC28-207ENST00000558500 DEFB132Q7Z7B7 95 aa10.46□□□□□ -0.73
LRRC28-207ENST00000558500 NUP155O75694 1391 aa10.46□□□□□ -0.74
LRRC28-207ENST00000558500 ROBO2Q9HCK4 1378 aa10.45□□□□□ -0.74
LRRC28-207ENST00000558500 NALCNQ8IZF0 1738 aa10.44□□□□□ -0.74
LRRC28-207ENST00000558500 COL22A1Q8NFW1 1626 aaPredicted RBP10.44□□□□□ -0.74
LRRC28-207ENST00000558500 NPHP3Q7Z494 1330 aa10.44□□□□□ -0.74
LRRC28-207ENST00000558500 IQGAP3Q86VI3 1631 aa10.44□□□□□ -0.74
LRRC28-207ENST00000558500 RALGAPBQ86X10 1494 aa10.43□□□□□ -0.74
LRRC28-207ENST00000558500 ROCK1Q13464 1354 aa10.43□□□□□ -0.74
LRRC28-207ENST00000558500 SF3B2Q13435 895 aaKnown RBP10.43□□□□□ -0.74
LRRC28-207ENST00000558500 UNC5CLQ8IV45 518 aa10.43□□□□□ -0.74
LRRC28-207ENST00000558500 ESCO1Q5FWF5 840 aa10.42□□□□□ -0.74
LRRC28-207ENST00000558500 PXDNQ92626 1479 aa10.42□□□□□ -0.74
LRRC28-207ENST00000558500 PRAG1Q86YV5 1406 aa10.41□□□□□ -0.74
LRRC28-207ENST00000558500 LRP5O75197 1615 aa10.41□□□□□ -0.74
LRRC28-207ENST00000558500 XPCQ01831 940 aaPredicted RBP10.41□□□□□ -0.74
LRRC28-207ENST00000558500 SEPT12Q8IYM1 358 aa10.41□□□□□ -0.74
LRRC28-207ENST00000558500 SLIT2O94813 1529 aa10.41□□□□□ -0.74
LRRC28-207ENST00000558500 HFM1A2PYH4 1435 aa10.41□□□□□ -0.74
LRRC28-207ENST00000558500 GLI3P10071 1580 aa10.4□□□□□ -0.74
LRRC28-207ENST00000558500 NEXMIFQ5QGS0 1516 aa10.4□□□□□ -0.74
LRRC28-207ENST00000558500 PSDA5PKW4 1024 aaPredicted RBP10.4□□□□□ -0.74
LRRC28-207ENST00000558500 FOXO3O43524 673 aa10.4□□□□□ -0.74
LRRC28-207ENST00000558500 HRCP23327 699 aa10.4□□□□□ -0.74
LRRC28-207ENST00000558500 LRPPRCP42704 1394 aaKnown RBP10.39□□□□□ -0.75
LRRC28-207ENST00000558500 VGFO15240 615 aaPredicted RBP10.38□□□□□ -0.75
LRRC28-207ENST00000558500 ONECUT3O60422 494 aaPredicted RBP10.38□□□□□ -0.75
LRRC28-207ENST00000558500 VPS72Q15906 364 aa10.38□□□□□ -0.75
LRRC28-207ENST00000558500 SPINK5Q9NQ38 1064 aaPredicted RBP10.38□□□□□ -0.75
LRRC28-207ENST00000558500 CAPN15O75808 1086 aa10.37□□□□□ -0.75
LRRC28-207ENST00000558500 BAG6P46379 1132 aa10.37□□□□□ -0.75
LRRC28-207ENST00000558500 KRT27Q7Z3Y8 459 aa10.37□□□□□ -0.75
LRRC28-207ENST00000558500 SPATA31A3Q5VYP0 1347 aa10.36□□□□□ -0.75
LRRC28-207ENST00000558500 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.36□□□□□ -0.75
LRRC28-207ENST00000558500 CDC42BPGQ6DT37 1551 aa10.35□□□□□ -0.75
LRRC28-207ENST00000558500 SPHKAPQ2M3C7 1700 aa10.35□□□□□ -0.75
LRRC28-207ENST00000558500 CLTCL1P53675 1640 aa10.34□□□□□ -0.75
LRRC28-207ENST00000558500 NUTM2FA1L443 756 aa10.34□□□□□ -0.75
LRRC28-207ENST00000558500 RPGRIP1LQ68CZ1 1315 aa10.33□□□□□ -0.76
LRRC28-207ENST00000558500 NAIPQ13075 1403 aa10.33□□□□□ -0.76
LRRC28-207ENST00000558500 CCDC9Q9Y3X0 531 aaKnown RBP10.33□□□□□ -0.76
LRRC28-207ENST00000558500 CCDC144AA2RUR9 1427 aa10.33□□□□□ -0.76
LRRC28-207ENST00000558500 ITGAEP38570 1179 aa10.32□□□□□ -0.76
LRRC28-207ENST00000558500 HAP1P54257 671 aaPredicted RBP10.32□□□□□ -0.76
LRRC28-207ENST00000558500 EN1Q05925 392 aaPredicted RBP10.32□□□□□ -0.76
LRRC28-207ENST00000558500 R3HDM1Q15032 1099 aaKnown RBP10.32□□□□□ -0.76
LRRC28-207ENST00000558500 KRT28Q7Z3Y7 464 aa10.32□□□□□ -0.76
LRRC28-207ENST00000558500 ZNF219Q9P2Y4 722 aaPredicted RBP10.32□□□□□ -0.76
LRRC28-207ENST00000558500 MARF1Q9Y4F3 1742 aaKnown RBP10.32□□□□□ -0.76
LRRC28-207ENST00000558500 WAPLQ7Z5K2 1190 aa10.31□□□□□ -0.76
LRRC28-207ENST00000558500 CABLES1Q8TDN4 633 aa10.31□□□□□ -0.76
LRRC28-207ENST00000558500 USP32Q8NFA0 1604 aa10.31□□□□□ -0.76
LRRC28-207ENST00000558500 A0A0G2JS52 829 aa10.3□□□□□ -0.76
LRRC28-207ENST00000558500 YY1P25490 414 aa10.3□□□□□ -0.76
LRRC28-207ENST00000558500 MYT1Q01538 1121 aa10.3□□□□□ -0.76
LRRC28-207ENST00000558500 TECPR2O15040 1411 aa10.3□□□□□ -0.76
LRRC28-207ENST00000558500 TNS3Q68CZ2 1445 aa10.3□□□□□ -0.76
LRRC28-207ENST00000558500 BRWD3Q6RI45 1802 aa10.29□□□□□ -0.76
LRRC28-207ENST00000558500 PSME1Q06323 249 aa10.29□□□□□ -0.76
LRRC28-207ENST00000558500 FAM98CQ17RN3 349 aaKnown RBP10.29□□□□□ -0.76
LRRC28-207ENST00000558500 STK26Q9P289 416 aa10.29□□□□□ -0.76
LRRC28-207ENST00000558500 PLEKHH1Q9ULM0 1364 aa10.28□□□□□ -0.76
LRRC28-207ENST00000558500 DISP2A7MBM2 1401 aa10.28□□□□□ -0.76
LRRC28-207ENST00000558500 FAM83GA6ND36 823 aa10.28□□□□□ -0.76
LRRC28-207ENST00000558500 PLEKHG5O94827 1062 aa10.28□□□□□ -0.76
LRRC28-207ENST00000558500 ABCC11Q96J66 1382 aa10.27□□□□□ -0.76
LRRC28-207ENST00000558500 ATXN8OSP0DMR3 200 aa10.27□□□□□ -0.77
LRRC28-207ENST00000558500 EZH2Q15910 746 aaKnown RBP10.27□□□□□ -0.77
LRRC28-207ENST00000558500 FAM182BQ5T319 152 aa10.27□□□□□ -0.77
LRRC28-207ENST00000558500 PHF8Q9UPP1 1060 aa10.27□□□□□ -0.77
LRRC28-207ENST00000558500 SBNO1A3KN83 1393 aa10.26□□□□□ -0.77
LRRC28-207ENST00000558500 ARHGEF10O15013 1369 aa10.26□□□□□ -0.77
LRRC28-207ENST00000558500 LMOD2Q6P5Q4 547 aa10.26□□□□□ -0.77
LRRC28-207ENST00000558500 BTG4Q9NY30 223 aa10.26□□□□□ -0.77
LRRC28-207ENST00000558500 ADGRF5Q8IZF2 1346 aa10.26□□□□□ -0.77
LRRC28-207ENST00000558500 CAMKK2Q96RR4 588 aa10.25□□□□□ -0.77
LRRC28-207ENST00000558500 KIF1AQ12756 1690 aa10.25□□□□□ -0.77
LRRC28-207ENST00000558500 TMEM132EQ6IEE7 984 aa10.24□□□□□ -0.77
LRRC28-207ENST00000558500 PLCH1Q4KWH8 1693 aa10.24□□□□□ -0.77
LRRC28-207ENST00000558500 NWD2Q9ULI1 1742 aa10.24□□□□□ -0.77
LRRC28-207ENST00000558500 KIF1BO60333 1816 aa10.23□□□□□ -0.77
LRRC28-207ENST00000558500 SIRT1Q96EB6 747 aa10.23□□□□□ -0.77
LRRC28-207ENST00000558500 SPATA31A5Q5VU36 1347 aa10.23□□□□□ -0.77
LRRC28-207ENST00000558500 SPATA31A7Q8IWB4 1347 aa10.23□□□□□ -0.77
LRRC28-207ENST00000558500 RRBP1Q9P2E9 1410 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms