RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 TMEM132AQ24JP5 1023 aa16.87■□□□□ 0.29
SPG11-210ENST00000558319 ZKSCAN2Q63HK3 967 aa16.87■□□□□ 0.29
SPG11-210ENST00000558319 MRE11P49959 708 aa16.87■□□□□ 0.29
SPG11-210ENST00000558319 NLRP2Q9NX02 1062 aa16.86■□□□□ 0.29
SPG11-210ENST00000558319 MAP4K4O95819 1239 aaPredicted RBP16.86■□□□□ 0.29
SPG11-210ENST00000558319 SMC3Q9UQE7 1217 aa16.86■□□□□ 0.29
SPG11-210ENST00000558319 TSPYL1Q9H0U9 437 aa16.86■□□□□ 0.29
SPG11-210ENST00000558319 ATP2B2Q01814 1243 aa16.86■□□□□ 0.29
SPG11-210ENST00000558319 CABP2Q9NPB3 220 aa16.86■□□□□ 0.29
SPG11-210ENST00000558319 RBM42Q9BTD8 480 aaKnown RBP16.86■□□□□ 0.29
SPG11-210ENST00000558319 CDR1P51861 262 aa16.85■□□□□ 0.29
SPG11-210ENST00000558319 G3BP1Q13283 466 aaKnown RBP eCLIP16.85■□□□□ 0.29
SPG11-210ENST00000558319 CAVIN1Q6NZI2 390 aaKnown RBP16.85■□□□□ 0.29
SPG11-210ENST00000558319 DNAJC2Q99543 621 aaKnown RBP16.85■□□□□ 0.29
SPG11-210ENST00000558319 ERICH2A1L162 156 aa16.85■□□□□ 0.29
SPG11-210ENST00000558319 SPC24Q8NBT2 197 aa16.85■□□□□ 0.29
SPG11-210ENST00000558319 CEBPZQ03701 1054 aaKnown RBP16.85■□□□□ 0.29
SPG11-210ENST00000558319 C1orf115Q9H7X2 142 aa16.85■□□□□ 0.29
SPG11-210ENST00000558319 SPINK5Q9NQ38 1064 aaPredicted RBP16.85■□□□□ 0.29
SPG11-210ENST00000558319 GGNBP2Q9H3C7 697 aa16.84■□□□□ 0.29
SPG11-210ENST00000558319 HDAC5Q9UQL6 1122 aa16.84■□□□□ 0.29
SPG11-210ENST00000558319 TRAK2O60296 914 aa16.84■□□□□ 0.29
SPG11-210ENST00000558319 CT47A1Q5JQC4 288 aaPredicted RBP16.84■□□□□ 0.29
SPG11-210ENST00000558319 TMEM132EQ6IEE7 984 aa16.84■□□□□ 0.29
SPG11-210ENST00000558319 MYBBP1AQ9BQG0 1328 aaKnown RBP16.84■□□□□ 0.29
SPG11-210ENST00000558319 REC8O95072 547 aa16.84■□□□□ 0.29
SPG11-210ENST00000558319 TRDNQ13061 729 aa16.83■□□□□ 0.29
SPG11-210ENST00000558319 C22orf23Q9BZE7 217 aa16.83■□□□□ 0.28
SPG11-210ENST00000558319 MTERF4Q7Z6M4 381 aaKnown RBP16.83■□□□□ 0.28
SPG11-210ENST00000558319 PANK1Q8TE04 598 aa16.83■□□□□ 0.28
SPG11-210ENST00000558319 LEKR1Q6ZMV7 388 aa16.82■□□□□ 0.28
SPG11-210ENST00000558319 ZKSCAN1P17029 563 aaPredicted RBP16.82■□□□□ 0.28
SPG11-210ENST00000558319 HOOK1Q9UJC3 728 aaKnown RBP16.82■□□□□ 0.28
SPG11-210ENST00000558319 KIF15Q9NS87 1388 aa16.82■□□□□ 0.28
SPG11-210ENST00000558319 CGNL1Q0VF96 1302 aa16.82■□□□□ 0.28
SPG11-210ENST00000558319 DIAPH1O60610 1272 aaKnown RBP16.82■□□□□ 0.28
SPG11-210ENST00000558319 NUCB2P80303 420 aa16.81■□□□□ 0.28
SPG11-210ENST00000558319 BRPF1P55201 1214 aaPredicted RBP16.81■□□□□ 0.28
SPG11-210ENST00000558319 AXDND1Q5T1B0 1012 aaPredicted RBP16.81■□□□□ 0.28
SPG11-210ENST00000558319 CCDC47Q96A33 483 aaKnown RBP16.81■□□□□ 0.28
SPG11-210ENST00000558319 TRIM5Q9C035 493 aa16.81■□□□□ 0.28
SPG11-210ENST00000558319 ERICH4A6NGS2 130 aa16.8■□□□□ 0.28
SPG11-210ENST00000558319 EVC2Q86UK5 1308 aa16.8■□□□□ 0.28
SPG11-210ENST00000558319 CCDC73Q6ZRK6 1079 aa16.8■□□□□ 0.28
SPG11-210ENST00000558319 PIP4K2BP78356 416 aa16.8■□□□□ 0.28
SPG11-210ENST00000558319 HSP90AB2PQ58FF8 381 aa16.8■□□□□ 0.28
SPG11-210ENST00000558319 ODF2Q5BJF6 829 aa16.8■□□□□ 0.28
SPG11-210ENST00000558319 RUFY2Q8WXA3 655 aa16.79■□□□□ 0.28
SPG11-210ENST00000558319 ZBED9Q6R2W3 1325 aa16.79■□□□□ 0.28
SPG11-210ENST00000558319 SMC2O95347 1197 aa16.79■□□□□ 0.28
SPG11-210ENST00000558319 DCTN1Q14203 1278 aa16.79■□□□□ 0.28
SPG11-210ENST00000558319 E9PSI1 815 aa16.79■□□□□ 0.28
SPG11-210ENST00000558319 PAF1Q8N7H5 531 aa16.79■□□□□ 0.28
SPG11-210ENST00000558319 CCDC88BA6NC98 1476 aa16.79■□□□□ 0.28
SPG11-210ENST00000558319 CPLX2Q6PUV4 134 aaKnown RBP16.79■□□□□ 0.28
SPG11-210ENST00000558319 ATF3P18847 181 aa16.78■□□□□ 0.28
SPG11-210ENST00000558319 EPS15P42566 896 aa16.78■□□□□ 0.28
SPG11-210ENST00000558319 PIBF1Q8WXW3 757 aa16.78■□□□□ 0.28
SPG11-210ENST00000558319 FMNL2Q96PY5 1086 aa16.77■□□□□ 0.28
SPG11-210ENST00000558319 UQCRHLA0A096LP55 91 aa16.77■□□□□ 0.28
SPG11-210ENST00000558319 UQCRHP07919 91 aa16.77■□□□□ 0.28
SPG11-210ENST00000558319 CCDC144AA2RUR9 1427 aa16.77■□□□□ 0.28
SPG11-210ENST00000558319 PRDM10Q9NQV6 1147 aa16.77■□□□□ 0.27
SPG11-210ENST00000558319 STK3Q13188 491 aa16.76■□□□□ 0.27
SPG11-210ENST00000558319 SIL1Q9H173 461 aa16.76■□□□□ 0.27
SPG11-210ENST00000558319 PRPF40AO75400 957 aaKnown RBP16.76■□□□□ 0.27
SPG11-210ENST00000558319 OLFM4Q6UX06 510 aa16.76■□□□□ 0.27
SPG11-210ENST00000558319 CHMP4AQ9BY43 222 aa16.76■□□□□ 0.27
SPG11-210ENST00000558319 INTS3Q68E01 1043 aaKnown RBP16.76■□□□□ 0.27
SPG11-210ENST00000558319 RAPGEF4Q8WZA2 1011 aa16.76■□□□□ 0.27
SPG11-210ENST00000558319 TSPY26PQ9H489 355 aa16.76■□□□□ 0.27
SPG11-210ENST00000558319 PHLDB1Q86UU1 1377 aa16.76■□□□□ 0.27
SPG11-210ENST00000558319 CCAR1Q8IX12 1150 aaKnown RBP16.75■□□□□ 0.27
SPG11-210ENST00000558319 ERCC4Q92889 916 aaPredicted RBP16.75■□□□□ 0.27
SPG11-210ENST00000558319 CHMP4BP1P59074 171 aa16.74■□□□□ 0.27
SPG11-210ENST00000558319 DDX58O95786 925 aaKnown RBP16.74■□□□□ 0.27
SPG11-210ENST00000558319 ESCO1Q5FWF5 840 aa16.74■□□□□ 0.27
SPG11-210ENST00000558319 DZIP1LQ8IYY4 767 aaKnown RBP16.74■□□□□ 0.27
SPG11-210ENST00000558319 DDX54Q8TDD1 881 aaKnown RBP16.74■□□□□ 0.27
SPG11-210ENST00000558319 JPH4Q96JJ6 628 aa16.74■□□□□ 0.27
SPG11-210ENST00000558319 FMN1Q68DA7 1419 aa16.74■□□□□ 0.27
SPG11-210ENST00000558319 FAM69CQ0P6D2 419 aa16.74■□□□□ 0.27
SPG11-210ENST00000558319 XPCQ01831 940 aaPredicted RBP16.74■□□□□ 0.27
SPG11-210ENST00000558319 DDX19BQ9UMR2 479 aa16.74■□□□□ 0.27
SPG11-210ENST00000558319 SDF4Q9BRK5 362 aa16.73■□□□□ 0.27
SPG11-210ENST00000558319 PRKRIP1Q9H875 184 aaPredicted RBP16.73■□□□□ 0.27
SPG11-210ENST00000558319 VPS8Q8N3P4 1428 aa16.73■□□□□ 0.27
SPG11-210ENST00000558319 CCDC85AQ96PX6 553 aaPredicted RBP16.73■□□□□ 0.27
SPG11-210ENST00000558319 CT47B1P0C2W7 299 aaPredicted RBP16.73■□□□□ 0.27
SPG11-210ENST00000558319 RBM5P52756 815 aaKnown RBP eCLIP16.73■□□□□ 0.27
SPG11-210ENST00000558319 NAT10Q9H0A0 1025 aaKnown RBP16.73■□□□□ 0.27
SPG11-210ENST00000558319 CCDC173Q0VFZ6 552 aa16.73■□□□□ 0.27
SPG11-210ENST00000558319 FAM177A1Q8N128 213 aaPredicted RBP16.72■□□□□ 0.27
SPG11-210ENST00000558319 RALYLQ86SE5 291 aaKnown RBP16.72■□□□□ 0.27
SPG11-210ENST00000558319 BICDL1Q6ZP65 573 aa16.72■□□□□ 0.27
SPG11-210ENST00000558319 ZHX3Q9H4I2 956 aa16.72■□□□□ 0.27
SPG11-210ENST00000558319 MYL6BP14649 208 aa16.72■□□□□ 0.27
SPG11-210ENST00000558319 OFD1O75665 1012 aa16.71■□□□□ 0.27
SPG11-210ENST00000558319 RNF20Q5VTR2 975 aa16.71■□□□□ 0.27
SPG11-210ENST00000558319 FAM193AP78312 1265 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms