RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 TRPM1Q7Z4N2 1603 aa11.32□□□□□ -0.6
RTF1-205ENST00000558298 SIRT1Q96EB6 747 aa11.32□□□□□ -0.6
RTF1-205ENST00000558298 RGL3Q3MIN7 710 aa11.31□□□□□ -0.6
RTF1-205ENST00000558298 SLAIN2Q9P270 581 aa11.31□□□□□ -0.6
RTF1-205ENST00000558298 YTHDC2Q9H6S0 1430 aaKnown RBP11.31□□□□□ -0.6
RTF1-205ENST00000558298 ARHGEF28Q8N1W1 1705 aaKnown RBP11.31□□□□□ -0.6
RTF1-205ENST00000558298 SHPRHQ149N8 1683 aa11.3□□□□□ -0.6
RTF1-205ENST00000558298 CADPS2Q86UW7 1296 aa11.3□□□□□ -0.6
RTF1-205ENST00000558298 BCL11AQ9H165 835 aa11.29□□□□□ -0.6
RTF1-205ENST00000558298 TIMELESSQ9UNS1 1208 aa11.28□□□□□ -0.6
RTF1-205ENST00000558298 FMN2Q9NZ56 1722 aa11.28□□□□□ -0.6
RTF1-205ENST00000558298 GPRASP1Q5JY77 1395 aa11.28□□□□□ -0.6
RTF1-205ENST00000558298 DISP3Q9P2K9 1392 aa11.28□□□□□ -0.6
RTF1-205ENST00000558298 C1orf167Q5SNV9 1468 aa11.27□□□□□ -0.6
RTF1-205ENST00000558298 DCAF11Q8TEB1 546 aa11.27□□□□□ -0.61
RTF1-205ENST00000558298 BRINP3Q76B58 766 aa11.26□□□□□ -0.61
RTF1-205ENST00000558298 PLEKHH1Q9ULM0 1364 aa11.26□□□□□ -0.61
RTF1-205ENST00000558298 RALGAPBQ86X10 1494 aa11.25□□□□□ -0.61
RTF1-205ENST00000558298 ATF3P18847 181 aa11.25□□□□□ -0.61
RTF1-205ENST00000558298 LRP6O75581 1613 aa11.24□□□□□ -0.61
RTF1-205ENST00000558298 CFAP70Q5T0N1 1121 aa11.24□□□□□ -0.61
RTF1-205ENST00000558298 L3MBTL2Q969R5 705 aa11.24□□□□□ -0.61
RTF1-205ENST00000558298 USP32Q8NFA0 1604 aa11.24□□□□□ -0.61
RTF1-205ENST00000558298 TMEM132EQ6IEE7 984 aa11.23□□□□□ -0.61
RTF1-205ENST00000558298 ILDR2Q71H61 639 aa11.23□□□□□ -0.61
RTF1-205ENST00000558298 C14orf37Q86TY3 774 aa11.23□□□□□ -0.61
RTF1-205ENST00000558298 TONSLQ96HA7 1378 aa11.23□□□□□ -0.61
RTF1-205ENST00000558298 JCADQ9P266 1359 aa11.23□□□□□ -0.61
RTF1-205ENST00000558298 KIF1AQ12756 1690 aa11.22□□□□□ -0.61
RTF1-205ENST00000558298 COL22A1Q8NFW1 1626 aaPredicted RBP11.22□□□□□ -0.61
RTF1-205ENST00000558298 SIN3AQ96ST3 1273 aa11.22□□□□□ -0.61
RTF1-205ENST00000558298 PXDNQ92626 1479 aa11.21□□□□□ -0.61
RTF1-205ENST00000558298 ANKARQ7Z5J8 1434 aa11.21□□□□□ -0.61
RTF1-205ENST00000558298 SBNO2Q9Y2G9 1366 aa11.21□□□□□ -0.61
RTF1-205ENST00000558298 EIF3AQ14152 1382 aaKnown RBP11.2□□□□□ -0.62
RTF1-205ENST00000558298 WAPLQ7Z5K2 1190 aa11.2□□□□□ -0.62
RTF1-205ENST00000558298 RGPD8O14715 1765 aaPredicted RBP11.2□□□□□ -0.62
RTF1-205ENST00000558298 ITSN1Q15811 1721 aa11.2□□□□□ -0.62
RTF1-205ENST00000558298 QRICH2Q9H0J4 1663 aa11.2□□□□□ -0.62
RTF1-205ENST00000558298 SOS2Q07890 1332 aaPredicted RBP11.19□□□□□ -0.62
RTF1-205ENST00000558298 RGS17Q9UGC6 210 aaPredicted RBP11.19□□□□□ -0.62
RTF1-205ENST00000558298 TOPAZ1Q8N9V7 1692 aa11.19□□□□□ -0.62
RTF1-205ENST00000558298 TULP4Q9NRJ4 1543 aa11.19□□□□□ -0.62
RTF1-205ENST00000558298 SPATA31A6Q5VVP1 1343 aa11.18□□□□□ -0.62
RTF1-205ENST00000558298 PNPLA6Q8IY17 1366 aa11.17□□□□□ -0.62
RTF1-205ENST00000558298 ORAI2Q96SN7 254 aa11.17□□□□□ -0.62
RTF1-205ENST00000558298 STK26Q9P289 416 aa11.17□□□□□ -0.62
RTF1-205ENST00000558298 KDM2AQ9Y2K7 1162 aa11.17□□□□□ -0.62
RTF1-205ENST00000558298 ROCK2O75116 1388 aaKnown RBP11.16□□□□□ -0.62
RTF1-205ENST00000558298 PRAM1Q96QH2 718 aa11.15□□□□□ -0.62
RTF1-205ENST00000558298 SUPT16HQ9Y5B9 1047 aaKnown RBP11.15□□□□□ -0.62
RTF1-205ENST00000558298 TRPM3Q9HCF6 1732 aaPredicted RBP11.15□□□□□ -0.63
RTF1-205ENST00000558298 ATP7BP35670 1465 aa11.14□□□□□ -0.63
RTF1-205ENST00000558298 NBPF8Q3BBV2 869 aa11.14□□□□□ -0.63
RTF1-205ENST00000558298 DDX17Q92841 729 aaKnown RBP11.14□□□□□ -0.63
RTF1-205ENST00000558298 ABCA3Q99758 1704 aa11.14□□□□□ -0.63
RTF1-205ENST00000558298 MARF1Q9Y4F3 1742 aaKnown RBP11.14□□□□□ -0.63
RTF1-205ENST00000558298 NBPF1Q3BBV0 1214 aa11.13□□□□□ -0.63
RTF1-205ENST00000558298 CRYBG1Q9Y4K1 1723 aa11.12□□□□□ -0.63
RTF1-205ENST00000558298 LRRC59Q96AG4 307 aaKnown RBP11.12□□□□□ -0.63
RTF1-205ENST00000558298 TRAK1Q9UPV9 953 aa11.12□□□□□ -0.63
RTF1-205ENST00000558298 NPHP3Q7Z494 1330 aa11.11□□□□□ -0.63
RTF1-205ENST00000558298 PRR36Q9H6K5 1346 aa11.11□□□□□ -0.63
RTF1-205ENST00000558298 CENPJQ9HC77 1338 aaPredicted RBP11.11□□□□□ -0.63
RTF1-205ENST00000558298 ALS2Q96Q42 1657 aa11.11□□□□□ -0.63
RTF1-205ENST00000558298 SOCS7O14512 581 aa11.11□□□□□ -0.63
RTF1-205ENST00000558298 MIER1Q8N108 512 aa11.11□□□□□ -0.63
RTF1-205ENST00000558298 YTHDC1Q96MU7 727 aaKnown RBP11.11□□□□□ -0.63
RTF1-205ENST00000558298 SLC24A1O60721 1099 aa11.1□□□□□ -0.63
RTF1-205ENST00000558298 POGKQ9P215 609 aa11.1□□□□□ -0.63
RTF1-205ENST00000558298 WASLO00401 505 aaPredicted RBP11.09□□□□□ -0.63
RTF1-205ENST00000558298 ESCO1Q5FWF5 840 aa11.09□□□□□ -0.63
RTF1-205ENST00000558298 POTEAQ6S8J7 498 aa11.09□□□□□ -0.63
RTF1-205ENST00000558298 PHF23Q9BUL5 403 aaPredicted RBP11.09□□□□□ -0.63
RTF1-205ENST00000558298 TSHZ2Q9NRE2 1034 aa11.09□□□□□ -0.63
RTF1-205ENST00000558298 POLR3AO14802 1390 aaPredicted RBP11.08□□□□□ -0.64
RTF1-205ENST00000558298 PUS7Q96PZ0 661 aaKnown RBP11.08□□□□□ -0.64
RTF1-205ENST00000558298 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.08□□□□□ -0.64
RTF1-205ENST00000558298 TNS3Q68CZ2 1445 aa11.08□□□□□ -0.64
RTF1-205ENST00000558298 SBNO1A3KN83 1393 aa11.07□□□□□ -0.64
RTF1-205ENST00000558298 BRD4O60885 1362 aaPredicted RBP11.07□□□□□ -0.64
RTF1-205ENST00000558298 FOXO3O43524 673 aa11.07□□□□□ -0.64
RTF1-205ENST00000558298 SAFB2Q14151 953 aaKnown RBP eCLIP11.07□□□□□ -0.64
RTF1-205ENST00000558298 AKAP12Q02952 1782 aa11.07□□□□□ -0.64
RTF1-205ENST00000558298 SPATA31A3Q5VYP0 1347 aa11.07□□□□□ -0.64
RTF1-205ENST00000558298 NUTM2FA1L443 756 aa11.06□□□□□ -0.64
RTF1-205ENST00000558298 CARD11Q9BXL7 1154 aa11.06□□□□□ -0.64
RTF1-205ENST00000558298 PHF8Q9UPP1 1060 aa11.06□□□□□ -0.64
RTF1-205ENST00000558298 MINK1Q8N4C8 1332 aaPredicted RBP11.06□□□□□ -0.64
RTF1-205ENST00000558298 CDK12Q9NYV4 1490 aaPredicted RBP11.06□□□□□ -0.64
RTF1-205ENST00000558298 ATAD2Q6PL18 1390 aa11.05□□□□□ -0.64
RTF1-205ENST00000558298 NRKQ7Z2Y5 1582 aa11.05□□□□□ -0.64
RTF1-205ENST00000558298 HIRIP3Q9BW71 556 aaPredicted RBP11.05□□□□□ -0.64
RTF1-205ENST00000558298 USP54Q70EL1 1684 aa11.04□□□□□ -0.64
RTF1-205ENST00000558298 USP47Q96K76 1375 aa11.04□□□□□ -0.64
RTF1-205ENST00000558298 NINLQ9Y2I6 1382 aa11.04□□□□□ -0.64
RTF1-205ENST00000558298 MON2Q7Z3U7 1717 aa11.04□□□□□ -0.64
RTF1-205ENST00000558298 EVC2Q86UK5 1308 aa11.04□□□□□ -0.64
RTF1-205ENST00000558298 PLEKHG3A1L390 1219 aa11.03□□□□□ -0.64
RTF1-205ENST00000558298 NEFLP07196 543 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms