RNA–Protein interactions for RNA: ENST00000558271.5

LRRC49-209, Transcript of leucine rich repeat containing 49, humanhuman

TSL 4

Gene LRRC49, Length 573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-209ENST00000558271 MMP16P51512 607 aa8.71□□□□□ -1.02
LRRC49-209ENST00000558271 Q3C1V9 767 aa8.71□□□□□ -1.02
LRRC49-209ENST00000558271 WNT7AO00755 349 aa8.7□□□□□ -1.02
LRRC49-209ENST00000558271 CD46P15529 392 aa8.7□□□□□ -1.02
LRRC49-209ENST00000558271 GPIHBP1Q8IV16 184 aa8.7□□□□□ -1.02
LRRC49-209ENST00000558271 GMPR2Q9P2T1 348 aaKnown RBP8.7□□□□□ -1.02
LRRC49-209ENST00000558271 TTC24A2A3L6 582 aaPredicted RBP8.69□□□□□ -1.02
LRRC49-209ENST00000558271 SMPD1P17405 629 aa8.68□□□□□ -1.02
LRRC49-209ENST00000558271 SNIP1Q8TAD8 396 aaKnown RBP8.68□□□□□ -1.02
LRRC49-209ENST00000558271 C11orf95C9JLR9 678 aaPredicted RBP8.67□□□□□ -1.02
LRRC49-209ENST00000558271 TRIM32Q13049 653 aa8.67□□□□□ -1.02
LRRC49-209ENST00000558271 USB1Q9BQ65 265 aaKnown RBP8.67□□□□□ -1.02
LRRC49-209ENST00000558271 KDM4AO75164 1064 aa8.66□□□□□ -1.02
LRRC49-209ENST00000558271 DXOO77932 396 aaKnown RBP8.66□□□□□ -1.02
LRRC49-209ENST00000558271 MAP2K5Q13163 448 aa8.65□□□□□ -1.02
LRRC49-209ENST00000558271 MRGPRX2Q96LB1 330 aa8.65□□□□□ -1.02
LRRC49-209ENST00000558271 IRF6O14896 467 aa8.64□□□□□ -1.03
LRRC49-209ENST00000558271 WFS1O76024 890 aa8.64□□□□□ -1.03
LRRC49-209ENST00000558271 USP46P62068 366 aa8.63□□□□□ -1.03
LRRC49-209ENST00000558271 J3QL48 77 aa8.62□□□□□ -1.03
LRRC49-209ENST00000558271 NFX1Q12986 1120 aaKnown RBP8.62□□□□□ -1.03
LRRC49-209ENST00000558271 ATP13A2Q9NQ11 1180 aa8.62□□□□□ -1.03
LRRC49-209ENST00000558271 MINK1Q8N4C8 1332 aaPredicted RBP8.6□□□□□ -1.03
LRRC49-209ENST00000558271 MDM2Q00987 491 aaPredicted RBP8.6□□□□□ -1.03
LRRC49-209ENST00000558271 HLA-CQ95604 372 aa8.6□□□□□ -1.03
LRRC49-209ENST00000558271 REPIN1Q9BWE0 567 aaKnown RBP8.6□□□□□ -1.03
LRRC49-209ENST00000558271 KDM2AQ9Y2K7 1162 aa8.6□□□□□ -1.03
LRRC49-209ENST00000558271 HOXA2O43364 376 aa8.59□□□□□ -1.03
LRRC49-209ENST00000558271 RC3H1Q5TC82 1133 aaKnown RBP8.59□□□□□ -1.03
LRRC49-209ENST00000558271 WIPF1O43516 503 aa8.58□□□□□ -1.04
LRRC49-209ENST00000558271 SNRPBP14678 240 aaKnown RBP8.58□□□□□ -1.04
LRRC49-209ENST00000558271 WNT7BP56706 349 aa8.58□□□□□ -1.04
LRRC49-209ENST00000558271 SKOR1P84550 965 aa8.58□□□□□ -1.04
LRRC49-209ENST00000558271 HPS1Q92902 700 aa8.58□□□□□ -1.04
LRRC49-209ENST00000558271 CCDC24Q8N4L8 307 aa8.57□□□□□ -1.04
LRRC49-209ENST00000558271 TRIM47Q96LD4 638 aa8.57□□□□□ -1.04
LRRC49-209ENST00000558271 SENP2Q9HC62 589 aa8.57□□□□□ -1.04
LRRC49-209ENST00000558271 JUNDP17535 347 aa8.55□□□□□ -1.04
LRRC49-209ENST00000558271 TERTO14746 1132 aaKnown RBP8.54□□□□□ -1.04
LRRC49-209ENST00000558271 GUCA2AQ02747 115 aa8.54□□□□□ -1.04
LRRC49-209ENST00000558271 LCE2CQ5TA81 110 aa8.54□□□□□ -1.04
LRRC49-209ENST00000558271 SYMPKQ92797 1274 aaKnown RBP8.54□□□□□ -1.04
LRRC49-209ENST00000558271 FAM217BQ9NTX9 383 aaPredicted RBP8.54□□□□□ -1.04
LRRC49-209ENST00000558271 SIAH2O43255 324 aa8.53□□□□□ -1.04
LRRC49-209ENST00000558271 CLCN1P35523 988 aa8.53□□□□□ -1.04
LRRC49-209ENST00000558271 HAP1P54257 671 aaPredicted RBP8.53□□□□□ -1.04
LRRC49-209ENST00000558271 CCDC102AQ96A19 550 aa8.53□□□□□ -1.04
LRRC49-209ENST00000558271 KIFC2Q96AC6 838 aa8.53□□□□□ -1.04
LRRC49-209ENST00000558271 GPCPD1Q9NPB8 672 aa8.53□□□□□ -1.04
LRRC49-209ENST00000558271 STK17AQ9UEE5 414 aa8.53□□□□□ -1.04
LRRC49-209ENST00000558271 TULP1O00294 542 aaPredicted RBP8.52□□□□□ -1.05
LRRC49-209ENST00000558271 PTCRAQ6ISU1 281 aaPredicted RBP8.52□□□□□ -1.05
LRRC49-209ENST00000558271 ALDH1A1P00352 501 aa8.51□□□□□ -1.05
LRRC49-209ENST00000558271 INSM1Q01101 510 aaPredicted RBP8.51□□□□□ -1.05
LRRC49-209ENST00000558271 RETREG3Q86VR2 466 aa8.51□□□□□ -1.05
LRRC49-209ENST00000558271 NUTM1Q86Y26 1132 aa8.5□□□□□ -1.05
LRRC49-209ENST00000558271 NUDT12Q9BQG2 462 aa8.5□□□□□ -1.05
LRRC49-209ENST00000558271 PCDHGC3Q9UN70 934 aa8.49□□□□□ -1.05
LRRC49-209ENST00000558271 FDX1P10109 184 aa8.47□□□□□ -1.05
LRRC49-209ENST00000558271 EHBP1Q8NDI1 1231 aa8.46□□□□□ -1.06
LRRC49-209ENST00000558271 SH3BP2P78314 561 aa8.45□□□□□ -1.06
LRRC49-209ENST00000558271 KRI1Q8N9T8 703 aaKnown RBP8.45□□□□□ -1.06
LRRC49-209ENST00000558271 EVA1BQ9NVM1 165 aa8.45□□□□□ -1.06
LRRC49-209ENST00000558271 C6orf229H3BNL8 230 aa8.44□□□□□ -1.06
LRRC49-209ENST00000558271 CCNYL3P0C7X3 344 aa8.44□□□□□ -1.06
LRRC49-209ENST00000558271 MS4A1P11836 297 aa8.44□□□□□ -1.06
LRRC49-209ENST00000558271 TRIM46Q7Z4K8 759 aa8.44□□□□□ -1.06
LRRC49-209ENST00000558271 VSIG10Q8N0Z9 540 aa8.44□□□□□ -1.06
LRRC49-209ENST00000558271 CAPN5O15484 640 aaPredicted RBP8.43□□□□□ -1.06
LRRC49-209ENST00000558271 SSTR3P32745 418 aaPredicted RBP8.43□□□□□ -1.06
LRRC49-209ENST00000558271 PTPRNQ16849 979 aa8.43□□□□□ -1.06
LRRC49-209ENST00000558271 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.43□□□□□ -1.06
LRRC49-209ENST00000558271 SPIRE2Q8WWL2 714 aa8.43□□□□□ -1.06
LRRC49-209ENST00000558271 NXF1Q9UBU9 619 aaKnown RBP8.43□□□□□ -1.06
LRRC49-209ENST00000558271 WASF2Q9Y6W5 498 aa8.43□□□□□ -1.06
LRRC49-209ENST00000558271 SLC16A10Q8TF71 515 aa8.42□□□□□ -1.06
LRRC49-209ENST00000558271 NPAS3Q8IXF0 933 aa8.41□□□□□ -1.06
LRRC49-209ENST00000558271 BMP1P13497 986 aa8.4□□□□□ -1.06
LRRC49-209ENST00000558271 NDUFV2P19404 249 aa8.4□□□□□ -1.06
LRRC49-209ENST00000558271 KCNH2Q12809 1159 aa8.4□□□□□ -1.06
LRRC49-209ENST00000558271 DESI1Q6ICB0 168 aa8.4□□□□□ -1.06
LRRC49-209ENST00000558271 MPNDQ8N594 471 aa8.4□□□□□ -1.06
LRRC49-209ENST00000558271 BAP1Q92560 729 aa8.4□□□□□ -1.06
LRRC49-209ENST00000558271 UNC93B1Q9H1C4 597 aa8.4□□□□□ -1.06
LRRC49-209ENST00000558271 MOXD2PA6NHM9 499 aa8.39□□□□□ -1.07
LRRC49-209ENST00000558271 SPDYE5A6NIY4 337 aa8.38□□□□□ -1.07
LRRC49-209ENST00000558271 VARSP26640 1264 aaKnown RBP8.38□□□□□ -1.07
LRRC49-209ENST00000558271 PRR7Q8TB68 274 aa8.38□□□□□ -1.07
LRRC49-209ENST00000558271 LORP23490 312 aaPredicted RBP8.37□□□□□ -1.07
LRRC49-209ENST00000558271 ZNF511Q8NB15 262 aa8.37□□□□□ -1.07
LRRC49-209ENST00000558271 PLEKHG3A1L390 1219 aa8.36□□□□□ -1.07
LRRC49-209ENST00000558271 GJA5P36382 358 aa8.36□□□□□ -1.07
LRRC49-209ENST00000558271 GMPRP36959 345 aa8.36□□□□□ -1.07
LRRC49-209ENST00000558271 MTMR2Q13614 643 aa8.36□□□□□ -1.07
LRRC49-209ENST00000558271 LINC01559Q495D7 138 aa8.36□□□□□ -1.07
LRRC49-209ENST00000558271 BARGINQ6ZT62 677 aa8.36□□□□□ -1.07
LRRC49-209ENST00000558271 IRF7Q92985 503 aa8.36□□□□□ -1.07
LRRC49-209ENST00000558271 ZFP42Q96MM3 310 aa8.36□□□□□ -1.07
LRRC49-209ENST00000558271 H3BM21 787 aa8.35□□□□□ -1.07
LRRC49-209ENST00000558271 AMHR2Q16671 573 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms