RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 CLTCQ00610 1675 aaKnown RBP13.99□□□□□ -0.17
TPM1-210ENST00000558264 ARHGEF28Q8N1W1 1705 aaKnown RBP13.99□□□□□ -0.17
TPM1-210ENST00000558264 APAF1O14727 1248 aa13.99□□□□□ -0.17
TPM1-210ENST00000558264 POGKQ9P215 609 aa13.98□□□□□ -0.17
TPM1-210ENST00000558264 PLPPR3Q6T4P5 718 aa13.95□□□□□ -0.18
TPM1-210ENST00000558264 ESF1Q9H501 851 aaKnown RBP13.95□□□□□ -0.18
TPM1-210ENST00000558264 SPINK5Q9NQ38 1064 aaPredicted RBP13.95□□□□□ -0.18
TPM1-210ENST00000558264 INSRP06213 1382 aa13.95□□□□□ -0.18
TPM1-210ENST00000558264 NEUROD2Q15784 382 aa13.95□□□□□ -0.18
TPM1-210ENST00000558264 KIF13AQ9H1H9 1805 aa13.95□□□□□ -0.18
TPM1-210ENST00000558264 WAPLQ7Z5K2 1190 aa13.94□□□□□ -0.18
TPM1-210ENST00000558264 DMRT2Q9Y5R5 561 aa13.94□□□□□ -0.18
TPM1-210ENST00000558264 ZFYVE9O95405 1425 aa13.94□□□□□ -0.18
TPM1-210ENST00000558264 YTHDC2Q9H6S0 1430 aaKnown RBP13.94□□□□□ -0.18
TPM1-210ENST00000558264 CGNL1Q0VF96 1302 aa13.94□□□□□ -0.18
TPM1-210ENST00000558264 MTHFSP49914 203 aa13.94□□□□□ -0.18
TPM1-210ENST00000558264 DUSP27Q5VZP5 1158 aa13.94□□□□□ -0.18
TPM1-210ENST00000558264 RRP7AQ9Y3A4 280 aaKnown RBP13.94□□□□□ -0.18
TPM1-210ENST00000558264 GOLGA2Q08379 1002 aa13.93□□□□□ -0.18
TPM1-210ENST00000558264 C20orf194Q5TEA3 1177 aa13.93□□□□□ -0.18
TPM1-210ENST00000558264 PTPRMP28827 1452 aa13.93□□□□□ -0.18
TPM1-210ENST00000558264 GGNBP2Q9H3C7 697 aa13.93□□□□□ -0.18
TPM1-210ENST00000558264 ZNF521Q96K83 1311 aa13.92□□□□□ -0.18
TPM1-210ENST00000558264 A0A1W2PP64 1363 aa13.92□□□□□ -0.18
TPM1-210ENST00000558264 AGLP35573 1532 aa13.92□□□□□ -0.18
TPM1-210ENST00000558264 ALKQ9UM73 1620 aa13.92□□□□□ -0.18
TPM1-210ENST00000558264 ANKRD36BQ8N2N9 1353 aa13.92□□□□□ -0.18
TPM1-210ENST00000558264 A2ML1A8K2U0 1454 aa13.91□□□□□ -0.18
TPM1-210ENST00000558264 CRBNQ96SW2 442 aa13.91□□□□□ -0.18
TPM1-210ENST00000558264 RIMS2Q9UQ26 1411 aa13.91□□□□□ -0.18
TPM1-210ENST00000558264 ZMYM3Q14202 1370 aa13.9□□□□□ -0.18
TPM1-210ENST00000558264 ARHGEF40Q8TER5 1519 aa13.9□□□□□ -0.18
TPM1-210ENST00000558264 CDK19Q9BWU1 502 aa13.9□□□□□ -0.18
TPM1-210ENST00000558264 REREQ9P2R6 1566 aa13.9□□□□□ -0.18
TPM1-210ENST00000558264 POLR3AO14802 1390 aaPredicted RBP13.9□□□□□ -0.18
TPM1-210ENST00000558264 SLFN5Q08AF3 891 aa13.89□□□□□ -0.19
TPM1-210ENST00000558264 CABP1Q9NZU7 370 aa13.88□□□□□ -0.19
TPM1-210ENST00000558264 PPP6R1Q9UPN7 881 aa13.88□□□□□ -0.19
TPM1-210ENST00000558264 SPATA31D1Q6ZQQ2 1576 aa13.88□□□□□ -0.19
TPM1-210ENST00000558264 CEBPAP49715 358 aaPredicted RBP13.87□□□□□ -0.19
TPM1-210ENST00000558264 SKAP1Q86WV1 359 aa13.87□□□□□ -0.19
TPM1-210ENST00000558264 TXNDC2Q86VQ3 553 aa13.87□□□□□ -0.19
TPM1-210ENST00000558264 FBLN1P23142 703 aa13.86□□□□□ -0.19
TPM1-210ENST00000558264 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.86□□□□□ -0.19
TPM1-210ENST00000558264 U2AF1L5P0DN76 240 aaPredicted RBP13.86□□□□□ -0.19
TPM1-210ENST00000558264 U2AF1Q01081 240 aaKnown RBP eCLIP13.86□□□□□ -0.196e-9■■■■□ 21.7
TPM1-210ENST00000558264 SHPRHQ149N8 1683 aa13.86□□□□□ -0.19
TPM1-210ENST00000558264 METP08581 1390 aa13.85□□□□□ -0.19
TPM1-210ENST00000558264 TCP11L2Q8N4U5 519 aa13.85□□□□□ -0.19
TPM1-210ENST00000558264 CFAP53Q96M91 514 aa13.85□□□□□ -0.19
TPM1-210ENST00000558264 FYB1O15117 783 aa13.85□□□□□ -0.19
TPM1-210ENST00000558264 WWC1Q8IX03 1113 aa13.85□□□□□ -0.19
TPM1-210ENST00000558264 PUS7Q96PZ0 661 aaKnown RBP13.85□□□□□ -0.19
TPM1-210ENST00000558264 TERF2IPQ9NYB0 399 aa13.85□□□□□ -0.19
TPM1-210ENST00000558264 ATAD2Q6PL18 1390 aa13.84□□□□□ -0.19
TPM1-210ENST00000558264 NCKAP5LQ9HCH0 1330 aa13.84□□□□□ -0.19
TPM1-210ENST00000558264 U2SURPO15042 1029 aaKnown RBP13.84□□□□□ -0.19
TPM1-210ENST00000558264 BCAR3O75815 825 aa13.84□□□□□ -0.19
TPM1-210ENST00000558264 ABCC11Q96J66 1382 aa13.84□□□□□ -0.19
TPM1-210ENST00000558264 CD163L1Q9NR16 1453 aa13.84□□□□□ -0.19
TPM1-210ENST00000558264 MSH5O43196 834 aa13.83□□□□□ -0.2
TPM1-210ENST00000558264 RUNDC1Q96C34 613 aa13.83□□□□□ -0.2
TPM1-210ENST00000558264 USP32Q8NFA0 1604 aa13.83□□□□□ -0.2
TPM1-210ENST00000558264 HDGFL2Q7Z4V5 671 aaPredicted RBP13.82□□□□□ -0.2
TPM1-210ENST00000558264 TNRQ92752 1358 aa13.82□□□□□ -0.2
TPM1-210ENST00000558264 E9PSI1 815 aa13.82□□□□□ -0.2
TPM1-210ENST00000558264 PPM1GO15355 546 aaPredicted RBP13.82□□□□□ -0.2
TPM1-210ENST00000558264 TRMT2AQ8IZ69 625 aaKnown RBP13.82□□□□□ -0.2
TPM1-210ENST00000558264 NSD2O96028 1365 aa13.8□□□□□ -0.2
TPM1-210ENST00000558264 NKTRP30414 1462 aaKnown RBP13.8□□□□□ -0.2
TPM1-210ENST00000558264 NUTM2FA1L443 756 aa13.8□□□□□ -0.2
TPM1-210ENST00000558264 NINLQ9Y2I6 1382 aa13.79□□□□□ -0.2
TPM1-210ENST00000558264 NRXN3Q9Y4C0 1643 aa13.79□□□□□ -0.2
TPM1-210ENST00000558264 ZRANB1Q9UGI0 708 aa13.78□□□□□ -0.2
TPM1-210ENST00000558264 SETD1AO15047 1707 aaKnown RBP13.78□□□□□ -0.2
TPM1-210ENST00000558264 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.78□□□□□ -0.2
TPM1-210ENST00000558264 BCL2L13Q9BXK5 485 aa13.78□□□□□ -0.2
TPM1-210ENST00000558264 TRHP20396 242 aaPredicted RBP13.77□□□□□ -0.2
TPM1-210ENST00000558264 SLC26A8Q96RN1 970 aa13.77□□□□□ -0.21
TPM1-210ENST00000558264 IQSEC2Q5JU85 1478 aa13.77□□□□□ -0.21
TPM1-210ENST00000558264 NLRP1Q9C000 1473 aa13.77□□□□□ -0.21
TPM1-210ENST00000558264 WASLO00401 505 aaPredicted RBP13.77□□□□□ -0.21
TPM1-210ENST00000558264 LTKP29376 864 aa13.77□□□□□ -0.21
TPM1-210ENST00000558264 FRAT1Q92837 279 aaPredicted RBP13.77□□□□□ -0.21
TPM1-210ENST00000558264 NME9Q86XW9 330 aa13.76□□□□□ -0.21
TPM1-210ENST00000558264 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.76□□□□□ -0.21
TPM1-210ENST00000558264 FANCIQ9NVI1 1328 aa13.75□□□□□ -0.21
TPM1-210ENST00000558264 TMEM2Q9UHN6 1383 aa13.75□□□□□ -0.21
TPM1-210ENST00000558264 CANXP27824 592 aaKnown RBP13.75□□□□□ -0.21
TPM1-210ENST00000558264 PPIP5K1Q6PFW1 1433 aa13.75□□□□□ -0.21
TPM1-210ENST00000558264 TSR2Q969E8 191 aaKnown RBP13.74□□□□□ -0.21
TPM1-210ENST00000558264 NUDT16Q96DE0 195 aaKnown RBP13.74□□□□□ -0.21
TPM1-210ENST00000558264 DLC1Q96QB1 1528 aa13.74□□□□□ -0.21
TPM1-210ENST00000558264 ROBO2Q9HCK4 1378 aa13.73□□□□□ -0.21
TPM1-210ENST00000558264 PANK1Q8TE04 598 aa13.73□□□□□ -0.21
TPM1-210ENST00000558264 TNNQ9UQP3 1299 aa13.73□□□□□ -0.21
TPM1-210ENST00000558264 DIAPH1O60610 1272 aaKnown RBP13.73□□□□□ -0.21
TPM1-210ENST00000558264 HDGFP51858 240 aaKnown RBP13.73□□□□□ -0.21
TPM1-210ENST00000558264 EMILIN1Q9Y6C2 1016 aa13.73□□□□□ -0.21
TPM1-210ENST00000558264 NGEFQ8N5V2 710 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms