RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 KDM2AQ9Y2K7 1162 aa16.41■□□□□ 0.22
RORA-207ENST00000558234 MON2Q7Z3U7 1717 aa16.4■□□□□ 0.22
RORA-207ENST00000558234 MARF1Q9Y4F3 1742 aaKnown RBP16.4■□□□□ 0.22
RORA-207ENST00000558234 KIF1AQ12756 1690 aa16.39■□□□□ 0.21
RORA-207ENST00000558234 TRPM3Q9HCF6 1732 aaPredicted RBP16.39■□□□□ 0.21
RORA-207ENST00000558234 TMEM132EQ6IEE7 984 aa16.38■□□□□ 0.21
RORA-207ENST00000558234 CRYBG1Q9Y4K1 1723 aa16.38■□□□□ 0.21
RORA-207ENST00000558234 TESK2Q96S53 571 aa16.38■□□□□ 0.21
RORA-207ENST00000558234 ATP7BP35670 1465 aa16.37■□□□□ 0.21
RORA-207ENST00000558234 AMOTL2Q9Y2J4 779 aa16.37■□□□□ 0.21
RORA-207ENST00000558234 USP47Q96K76 1375 aa16.37■□□□□ 0.21
RORA-207ENST00000558234 MST1RQ04912 1400 aa16.34■□□□□ 0.21
RORA-207ENST00000558234 TMEM94Q12767 1356 aa16.33■□□□□ 0.2
RORA-207ENST00000558234 ANKARQ7Z5J8 1434 aa16.33■□□□□ 0.2
RORA-207ENST00000558234 CD163L1Q9NR16 1453 aa16.32■□□□□ 0.2
RORA-207ENST00000558234 AHDC1Q5TGY3 1603 aaPredicted RBP16.32■□□□□ 0.2
RORA-207ENST00000558234 ROBO1Q9Y6N7 1651 aa16.32■□□□□ 0.2
RORA-207ENST00000558234 EIF3AQ14152 1382 aaKnown RBP16.32■□□□□ 0.2
RORA-207ENST00000558234 ALS2Q96Q42 1657 aa16.31■□□□□ 0.2
RORA-207ENST00000558234 ABCA3Q99758 1704 aa16.29■□□□□ 0.2
RORA-207ENST00000558234 DISP3Q9P2K9 1392 aa16.28■□□□□ 0.2
RORA-207ENST00000558234 ANKRD26Q9UPS8 1709 aa16.28■□□□□ 0.2
RORA-207ENST00000558234 PUS7Q96PZ0 661 aaKnown RBP16.27■□□□□ 0.2
RORA-207ENST00000558234 CARD11Q9BXL7 1154 aa16.27■□□□□ 0.2
RORA-207ENST00000558234 COL22A1Q8NFW1 1626 aaPredicted RBP16.27■□□□□ 0.2
RORA-207ENST00000558234 COL16A1Q07092 1604 aaPredicted RBP16.27■□□□□ 0.19
RORA-207ENST00000558234 PRAM1Q96QH2 718 aa16.27■□□□□ 0.19
RORA-207ENST00000558234 WAPLQ7Z5K2 1190 aa16.26■□□□□ 0.19
RORA-207ENST00000558234 CENPJQ9HC77 1338 aaPredicted RBP16.26■□□□□ 0.19
RORA-207ENST00000558234 DIEXFQ68CQ4 756 aaKnown RBP16.26■□□□□ 0.19
RORA-207ENST00000558234 C1orf167Q5SNV9 1468 aa16.26■□□□□ 0.19
RORA-207ENST00000558234 TRAK1Q9UPV9 953 aa16.25■□□□□ 0.19
RORA-207ENST00000558234 C11orf95C9JLR9 678 aaPredicted RBP16.24■□□□□ 0.19
RORA-207ENST00000558234 HSPA5P11021 654 aaKnown RBP16.24■□□□□ 0.19
RORA-207ENST00000558234 KIF20BQ96Q89 1820 aa16.24■□□□□ 0.19
RORA-207ENST00000558234 SSH2Q76I76 1423 aa16.24■□□□□ 0.19
RORA-207ENST00000558234 PXDNQ92626 1479 aa16.24■□□□□ 0.19
RORA-207ENST00000558234 PRR36Q9H6K5 1346 aa16.23■□□□□ 0.19
RORA-207ENST00000558234 WASHC2AQ641Q2 1341 aa16.23■□□□□ 0.19
RORA-207ENST00000558234 CPSF1Q10570 1443 aaKnown RBP16.22■□□□□ 0.19
RORA-207ENST00000558234 PIK3C2AO00443 1686 aa16.22■□□□□ 0.19
RORA-207ENST00000558234 MED1Q15648 1581 aaPredicted RBP16.22■□□□□ 0.19
RORA-207ENST00000558234 SHPRHQ149N8 1683 aa16.22■□□□□ 0.19
RORA-207ENST00000558234 POLR3AO14802 1390 aaPredicted RBP16.22■□□□□ 0.19
RORA-207ENST00000558234 ST20-MTHFSA0A0A6YYL1 179 aa16.22■□□□□ 0.19
RORA-207ENST00000558234 SENP3Q9H4L4 574 aaPredicted RBP16.2■□□□□ 0.18
RORA-207ENST00000558234 STK26Q9P289 416 aa16.19■□□□□ 0.18
RORA-207ENST00000558234 PHLPP1O60346 1717 aa16.19■□□□□ 0.18
RORA-207ENST00000558234 CCDC7Q96M83 1385 aa16.19■□□□□ 0.18
RORA-207ENST00000558234 C19orf44Q9H6X5 657 aa16.19■□□□□ 0.18
RORA-207ENST00000558234 WASLO00401 505 aaPredicted RBP16.18■□□□□ 0.18
RORA-207ENST00000558234 PHRF1Q9P1Y6 1649 aaKnown RBP16.18■□□□□ 0.18
RORA-207ENST00000558234 MSH6P52701 1360 aa16.17■□□□□ 0.18
RORA-207ENST00000558234 NINLQ9Y2I6 1382 aa16.17■□□□□ 0.18
RORA-207ENST00000558234 EIF4G2P78344 907 aaKnown RBP eCLIP16.16■□□□□ 0.18
RORA-207ENST00000558234 PROSER2Q86WR7 435 aaPredicted RBP16.16■□□□□ 0.18
RORA-207ENST00000558234 CERKQ8TCT0 537 aa16.16■□□□□ 0.18
RORA-207ENST00000558234 BCANQ96GW7 911 aa16.15■□□□□ 0.18
RORA-207ENST00000558234 RBM33Q96EV2 1170 aaKnown RBP16.13■□□□□ 0.17
RORA-207ENST00000558234 ATAD2Q6PL18 1390 aa16.13■□□□□ 0.17
RORA-207ENST00000558234 HIRIP3Q9BW71 556 aaPredicted RBP16.12■□□□□ 0.17
RORA-207ENST00000558234 KIF7Q2M1P5 1343 aa16.12■□□□□ 0.17
RORA-207ENST00000558234 PPIP5K1Q6PFW1 1433 aa16.12■□□□□ 0.17
RORA-207ENST00000558234 PLEKHG3A1L390 1219 aa16.12■□□□□ 0.17
RORA-207ENST00000558234 MINK1Q8N4C8 1332 aaPredicted RBP16.11■□□□□ 0.17
RORA-207ENST00000558234 CDK19Q9BWU1 502 aa16.11■□□□□ 0.17
RORA-207ENST00000558234 SLIT3O75094 1523 aa16.11■□□□□ 0.17
RORA-207ENST00000558234 EVC2Q86UK5 1308 aa16.11■□□□□ 0.17
RORA-207ENST00000558234 SLC24A1O60721 1099 aa16.11■□□□□ 0.17
RORA-207ENST00000558234 MIER1Q8N108 512 aa16.1■□□□□ 0.17
RORA-207ENST00000558234 BRD4O60885 1362 aaPredicted RBP16.09■□□□□ 0.17
RORA-207ENST00000558234 USP6P35125 1406 aa16.09■□□□□ 0.17
RORA-207ENST00000558234 CADPS2Q86UW7 1296 aa16.09■□□□□ 0.17
RORA-207ENST00000558234 POGKQ9P215 609 aa16.08■□□□□ 0.17
RORA-207ENST00000558234 COL18A1P39060 1754 aa16.08■□□□□ 0.16
RORA-207ENST00000558234 ANKRD36BQ8N2N9 1353 aa16.07■□□□□ 0.16
RORA-207ENST00000558234 BRINP3Q76B58 766 aa16.07■□□□□ 0.16
RORA-207ENST00000558234 A0A1W2PP64 1363 aa16.06■□□□□ 0.16
RORA-207ENST00000558234 NFAT5O94916 1531 aa16.06■□□□□ 0.16
RORA-207ENST00000558234 NUDT16Q96DE0 195 aaKnown RBP16.06■□□□□ 0.16
RORA-207ENST00000558234 SOS2Q07890 1332 aaPredicted RBP16.05■□□□□ 0.16
RORA-207ENST00000558234 TMF1P82094 1093 aa16.05■□□□□ 0.16
RORA-207ENST00000558234 SLAIN2Q9P270 581 aa16.05■□□□□ 0.16
RORA-207ENST00000558234 SAFB2Q14151 953 aaKnown RBP eCLIP16.04■□□□□ 0.16
RORA-207ENST00000558234 CABP2Q9NPB3 220 aa16.04■□□□□ 0.16
RORA-207ENST00000558234 SBNO1A3KN83 1393 aa16.04■□□□□ 0.16
RORA-207ENST00000558234 LMO7Q8WWI1 1683 aa16.04■□□□□ 0.16
RORA-207ENST00000558234 EDC4Q6P2E9 1401 aaKnown RBP16.03■□□□□ 0.16
RORA-207ENST00000558234 LTN1O94822 1766 aa16.03■□□□□ 0.16
RORA-207ENST00000558234 OVOS2A0A0J9YW53 1432 aa16.03■□□□□ 0.16
RORA-207ENST00000558234 OVOS2Q6IE36 1432 aa16.03■□□□□ 0.16
RORA-207ENST00000558234 ABCC6O95255 1503 aa16.02■□□□□ 0.16
RORA-207ENST00000558234 CCDC61Q9Y6R9 512 aa16.02■□□□□ 0.16
RORA-207ENST00000558234 NRAPQ86VF7 1730 aa16.02■□□□□ 0.16
RORA-207ENST00000558234 CAMTA1Q9Y6Y1 1673 aa16.02■□□□□ 0.15
RORA-207ENST00000558234 ORAI2Q96SN7 254 aa16.01■□□□□ 0.15
RORA-207ENST00000558234 PEAK1Q9H792 1746 aa16.01■□□□□ 0.15
RORA-207ENST00000558234 USP31Q70CQ4 1352 aa16.01■□□□□ 0.15
RORA-207ENST00000558234 PER1O15534 1290 aaPredicted RBP16■□□□□ 0.15
RORA-207ENST00000558234 NPC1L1Q9UHC9 1359 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms