RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 DOK7Q18PE1 504 aa11.67□□□□□ -0.54
SPG11-205ENST00000558080 ZFP91Q96JP5 570 aaPredicted RBP11.67□□□□□ -0.54
SPG11-205ENST00000558080 KRTAP3-3Q9BYR6 98 aa11.67□□□□□ -0.54
SPG11-205ENST00000558080 KRTAP3-2Q9BYR7 98 aa11.67□□□□□ -0.54
SPG11-205ENST00000558080 PLA2R1Q13018 1463 aa11.66□□□□□ -0.54
SPG11-205ENST00000558080 HOXB1P14653 301 aaPredicted RBP11.66□□□□□ -0.54
SPG11-205ENST00000558080 PKD2Q13563 968 aa11.66□□□□□ -0.54
SPG11-205ENST00000558080 MICALL2Q8IY33 904 aa11.66□□□□□ -0.54
SPG11-205ENST00000558080 DEPDC5O75140 1603 aa11.65□□□□□ -0.54
SPG11-205ENST00000558080 LTBP4Q8N2S1 1624 aa11.65□□□□□ -0.54
SPG11-205ENST00000558080 PPARGC1BQ86YN6 1023 aaKnown RBP11.65□□□□□ -0.54
SPG11-205ENST00000558080 ERBINQ96RT1 1412 aa11.65□□□□□ -0.54
SPG11-205ENST00000558080 ANKRD30AQ9BXX3 1397 aa11.65□□□□□ -0.55
SPG11-205ENST00000558080 SPATA31D1Q6ZQQ2 1576 aa11.64□□□□□ -0.55
SPG11-205ENST00000558080 ZNF710Q8N1W2 664 aa11.64□□□□□ -0.55
SPG11-205ENST00000558080 PRDM15P57071 1507 aaPredicted RBP11.64□□□□□ -0.55
SPG11-205ENST00000558080 UGGT1Q9NYU2 1555 aa11.63□□□□□ -0.55
SPG11-205ENST00000558080 MS4A4AQ96JQ5 239 aa11.63□□□□□ -0.55
SPG11-205ENST00000558080 UBR1Q8IWV7 1749 aa11.63□□□□□ -0.55
SPG11-205ENST00000558080 ERVK-7P63135 1459 aa11.63□□□□□ -0.55
SPG11-205ENST00000558080 NLRP1Q9C000 1473 aa11.63□□□□□ -0.55
SPG11-205ENST00000558080 ZNF335Q9H4Z2 1342 aaPredicted RBP11.62□□□□□ -0.55
SPG11-205ENST00000558080 THEMISQ8N1K5 641 aaPredicted RBP11.62□□□□□ -0.55
SPG11-205ENST00000558080 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.62□□□□□ -0.55
SPG11-205ENST00000558080 NEURL4Q96JN8 1562 aa11.62□□□□□ -0.55
SPG11-205ENST00000558080 TMEM92Q6UXU6 159 aa11.61□□□□□ -0.55
SPG11-205ENST00000558080 KANK1Q14678 1352 aa11.61□□□□□ -0.55
SPG11-205ENST00000558080 ADGRL2O95490 1459 aa11.6□□□□□ -0.55
SPG11-205ENST00000558080 ANKLE2Q86XL3 938 aa11.6□□□□□ -0.55
SPG11-205ENST00000558080 MYO5BQ9ULV0 1848 aa11.59□□□□□ -0.55
SPG11-205ENST00000558080 RIMBP2O15034 1052 aa11.59□□□□□ -0.55
SPG11-205ENST00000558080 PHF8Q9UPP1 1060 aa11.59□□□□□ -0.55
SPG11-205ENST00000558080 IQGAP1P46940 1657 aa11.59□□□□□ -0.55
SPG11-205ENST00000558080 VWDEQ8N2E2 1590 aa11.58□□□□□ -0.55
SPG11-205ENST00000558080 PIK3C2BO00750 1634 aa11.58□□□□□ -0.56
SPG11-205ENST00000558080 ARHGAP31Q2M1Z3 1444 aa11.58□□□□□ -0.56
SPG11-205ENST00000558080 ITGAEP38570 1179 aa11.57□□□□□ -0.56
SPG11-205ENST00000558080 ZSWIM6Q9HCJ5 1215 aa11.57□□□□□ -0.56
SPG11-205ENST00000558080 IQSEC2Q5JU85 1478 aa11.57□□□□□ -0.56
SPG11-205ENST00000558080 GCC2Q8IWJ2 1684 aa11.56□□□□□ -0.56
SPG11-205ENST00000558080 NPHP4O75161 1426 aaPredicted RBP11.56□□□□□ -0.56
SPG11-205ENST00000558080 ANKRD50Q9ULJ7 1429 aa11.56□□□□□ -0.56
SPG11-205ENST00000558080 STRCP1A6NGW2 1772 aa11.56□□□□□ -0.56
SPG11-205ENST00000558080 LMTK2Q8IWU2 1503 aa11.55□□□□□ -0.56
SPG11-205ENST00000558080 TAOK2Q9UL54 1235 aa11.55□□□□□ -0.56
SPG11-205ENST00000558080 ERBB3P21860 1342 aa11.55□□□□□ -0.56
SPG11-205ENST00000558080 EFCAB6Q5THR3 1501 aa11.55□□□□□ -0.56
SPG11-205ENST00000558080 SYNMO15061 1565 aa11.54□□□□□ -0.56
SPG11-205ENST00000558080 MED14O60244 1454 aa11.54□□□□□ -0.56
SPG11-205ENST00000558080 TET3O43151 1660 aa11.54□□□□□ -0.56
SPG11-205ENST00000558080 UBAP1LF5GYI3 381 aa11.53□□□□□ -0.56
SPG11-205ENST00000558080 UNC13BO14795 1591 aa11.53□□□□□ -0.56
SPG11-205ENST00000558080 KDM5AP29375 1690 aaKnown RBP11.52□□□□□ -0.56
SPG11-205ENST00000558080 NLRP6P59044 892 aa11.52□□□□□ -0.57
SPG11-205ENST00000558080 BCL11BQ9C0K0 894 aaPredicted RBP11.52□□□□□ -0.57
SPG11-205ENST00000558080 E9PCH4 1651 aa11.52□□□□□ -0.57
SPG11-205ENST00000558080 LTKP29376 864 aa11.51□□□□□ -0.57
SPG11-205ENST00000558080 IDI1Q13907 227 aa11.51□□□□□ -0.57
SPG11-205ENST00000558080 TXNDC2Q86VQ3 553 aa11.51□□□□□ -0.57
SPG11-205ENST00000558080 FBXO22Q8NEZ5 403 aa11.51□□□□□ -0.57
SPG11-205ENST00000558080 SCAF11Q99590 1463 aaKnown RBP11.51□□□□□ -0.57
SPG11-205ENST00000558080 ARHGAP23Q9P227 1491 aa11.51□□□□□ -0.57
SPG11-205ENST00000558080 SLIT1O75093 1534 aa11.5□□□□□ -0.57
SPG11-205ENST00000558080 CPS1P31327 1500 aa11.5□□□□□ -0.57
SPG11-205ENST00000558080 GPR153Q6NV75 609 aa11.5□□□□□ -0.57
SPG11-205ENST00000558080 ROCK1Q13464 1354 aa11.5□□□□□ -0.57
SPG11-205ENST00000558080 NOS1P29475 1434 aa11.5□□□□□ -0.57
SPG11-205ENST00000558080 IQGAP3Q86VI3 1631 aa11.49□□□□□ -0.57
SPG11-205ENST00000558080 XIRP1Q702N8 1843 aaKnown RBP11.49□□□□□ -0.57
SPG11-205ENST00000558080 VARS2Q5ST30 1063 aaKnown RBP11.49□□□□□ -0.57
SPG11-205ENST00000558080 EID1Q9Y6B2 187 aa11.49□□□□□ -0.57
SPG11-205ENST00000558080 TMEM2Q9UHN6 1383 aa11.48□□□□□ -0.57
SPG11-205ENST00000558080 ADGRB3O60242 1522 aa11.47□□□□□ -0.57
SPG11-205ENST00000558080 RPRD2Q5VT52 1461 aaKnown RBP11.47□□□□□ -0.57
SPG11-205ENST00000558080 STK24Q9Y6E0 443 aa11.46□□□□□ -0.57
SPG11-205ENST00000558080 TMEM131LA2VDJ0 1609 aa11.46□□□□□ -0.58
SPG11-205ENST00000558080 NUP155O75694 1391 aa11.45□□□□□ -0.58
SPG11-205ENST00000558080 PIP4K2BP78356 416 aa11.45□□□□□ -0.58
SPG11-205ENST00000558080 MFRPQ9BY79 579 aa11.45□□□□□ -0.58
SPG11-205ENST00000558080 SLC52A1Q9NWF4 448 aa11.45□□□□□ -0.58
SPG11-205ENST00000558080 LRRC7Q96NW7 1537 aa11.45□□□□□ -0.58
SPG11-205ENST00000558080 SPHKAPQ2M3C7 1700 aa11.44□□□□□ -0.58
SPG11-205ENST00000558080 TOM1O60784 492 aa11.44□□□□□ -0.58
SPG11-205ENST00000558080 CHGAP10645 457 aaKnown RBP11.44□□□□□ -0.58
SPG11-205ENST00000558080 RRBP1Q9P2E9 1410 aaKnown RBP11.43□□□□□ -0.58
SPG11-205ENST00000558080 ZNF687Q8N1G0 1237 aa11.43□□□□□ -0.58
SPG11-205ENST00000558080 BCANQ96GW7 911 aa11.43□□□□□ -0.58
SPG11-205ENST00000558080 CHD2O14647 1828 aaKnown RBP11.43□□□□□ -0.58
SPG11-205ENST00000558080 STK25O00506 426 aa11.42□□□□□ -0.58
SPG11-205ENST00000558080 SLC26A8Q96RN1 970 aa11.42□□□□□ -0.58
SPG11-205ENST00000558080 ALKQ9UM73 1620 aa11.42□□□□□ -0.58
SPG11-205ENST00000558080 ECM2O94769 699 aaPredicted RBP11.41□□□□□ -0.58
SPG11-205ENST00000558080 DISP3Q9P2K9 1392 aa11.41□□□□□ -0.58
SPG11-205ENST00000558080 KIF1BO60333 1816 aa11.4□□□□□ -0.58
SPG11-205ENST00000558080 RIMS2Q9UQ26 1411 aa11.4□□□□□ -0.58
SPG11-205ENST00000558080 KIF3CO14782 793 aa11.39□□□□□ -0.59
SPG11-205ENST00000558080 PPP1R15AO75807 674 aaPredicted RBP11.39□□□□□ -0.59
SPG11-205ENST00000558080 ZFYVE9O95405 1425 aa11.39□□□□□ -0.59
SPG11-205ENST00000558080 HSPA1LP34931 641 aa11.39□□□□□ -0.59
SPG11-205ENST00000558080 NAIPQ13075 1403 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms