RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 TNPO1Q92973 898 aaKnown RBP13.57□□□□□ -0.24
SEMA4B-204ENST00000558065 SLC26A8Q96RN1 970 aa13.56□□□□□ -0.24
SEMA4B-204ENST00000558065 ARAP1Q96P48 1450 aa13.56□□□□□ -0.24
SEMA4B-204ENST00000558065 RASSF4Q9H2L5 321 aa13.56□□□□□ -0.24
SEMA4B-204ENST00000558065 RTEL1-TNFRSF6BF6WH68 1400 aa13.56□□□□□ -0.24
SEMA4B-204ENST00000558065 CTIFO43310 598 aaKnown RBP13.55□□□□□ -0.24
SEMA4B-204ENST00000558065 ZNF445P59923 1031 aa13.55□□□□□ -0.24
SEMA4B-204ENST00000558065 NBPF9Q3BBW0 867 aa13.55□□□□□ -0.24
SEMA4B-204ENST00000558065 GPATCH11Q8N954 259 aa13.55□□□□□ -0.24
SEMA4B-204ENST00000558065 RBSNQ9H1K0 784 aa13.55□□□□□ -0.24
SEMA4B-204ENST00000558065 TTC36A6NLP5 189 aa13.55□□□□□ -0.24
SEMA4B-204ENST00000558065 NBPF10Q6P3W6 841 aaKnown RBP13.55□□□□□ -0.24
SEMA4B-204ENST00000558065 FBLN2P98095 1184 aa13.55□□□□□ -0.24
SEMA4B-204ENST00000558065 CTTNBP2Q8WZ74 1663 aa13.55□□□□□ -0.24
SEMA4B-204ENST00000558065 ZBTB7CA1YPR0 619 aa13.54□□□□□ -0.24
SEMA4B-204ENST00000558065 SETQ01105 290 aaPredicted RBP13.54□□□□□ -0.24
SEMA4B-204ENST00000558065 TOMM22Q9NS69 142 aa13.53□□□□□ -0.24
SEMA4B-204ENST00000558065 KIAA1107Q9UPP5 1409 aa13.53□□□□□ -0.24
SEMA4B-204ENST00000558065 PSMD1Q99460 953 aa13.53□□□□□ -0.24
SEMA4B-204ENST00000558065 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.53□□□□□ -0.24
SEMA4B-204ENST00000558065 EIF4G2P78344 907 aaKnown RBP eCLIP13.52□□□□□ -0.24
SEMA4B-204ENST00000558065 ZNF446Q9NWS9 450 aa13.52□□□□□ -0.25
SEMA4B-204ENST00000558065 FKBP5Q13451 457 aaPredicted RBP13.52□□□□□ -0.25
SEMA4B-204ENST00000558065 PIBF1Q8WXW3 757 aa13.52□□□□□ -0.25
SEMA4B-204ENST00000558065 KIF1CO43896 1103 aaKnown RBP13.51□□□□□ -0.25
SEMA4B-204ENST00000558065 CYP2C19P33261 490 aa13.51□□□□□ -0.25
SEMA4B-204ENST00000558065 MED4Q9NPJ6 270 aa13.51□□□□□ -0.25
SEMA4B-204ENST00000558065 SUFUQ9UMX1 484 aa13.51□□□□□ -0.25
SEMA4B-204ENST00000558065 NPC1L1Q9UHC9 1359 aa13.51□□□□□ -0.25
SEMA4B-204ENST00000558065 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.51□□□□□ -0.25
SEMA4B-204ENST00000558065 ARHGAP31Q2M1Z3 1444 aa13.51□□□□□ -0.25
SEMA4B-204ENST00000558065 PDE3BQ13370 1112 aa13.5□□□□□ -0.25
SEMA4B-204ENST00000558065 KLHL40Q2TBA0 621 aa13.5□□□□□ -0.25
SEMA4B-204ENST00000558065 NCBP1Q09161 790 aaKnown RBP13.5□□□□□ -0.25
SEMA4B-204ENST00000558065 CXorf56Q9H5V9 222 aa13.5□□□□□ -0.25
SEMA4B-204ENST00000558065 FAM53CQ9NYF3 392 aa13.5□□□□□ -0.25
SEMA4B-204ENST00000558065 CDCA7LQ96GN5 454 aa13.5□□□□□ -0.25
SEMA4B-204ENST00000558065 GBP4Q96PP9 640 aa13.5□□□□□ -0.25
SEMA4B-204ENST00000558065 POLKQ9UBT6 870 aa13.5□□□□□ -0.25
SEMA4B-204ENST00000558065 ZNF853P0CG23 659 aa13.49□□□□□ -0.25
SEMA4B-204ENST00000558065 CASQ1P31415 396 aa13.49□□□□□ -0.25
SEMA4B-204ENST00000558065 NOLC1Q14978 699 aaKnown RBP eCLIP13.49□□□□□ -0.25
SEMA4B-204ENST00000558065 RAB3GAP1Q15042 981 aa13.49□□□□□ -0.25
SEMA4B-204ENST00000558065 CREBRFQ8IUR6 639 aa13.49□□□□□ -0.25
SEMA4B-204ENST00000558065 CALR3Q96L12 384 aaKnown RBP13.49□□□□□ -0.25
SEMA4B-204ENST00000558065 KIF7Q2M1P5 1343 aa13.49□□□□□ -0.25
SEMA4B-204ENST00000558065 TDO2P48775 406 aa13.49□□□□□ -0.25
SEMA4B-204ENST00000558065 RIOK3O14730 519 aaKnown RBP13.49□□□□□ -0.25
SEMA4B-204ENST00000558065 HMGB1P09429 215 aaKnown RBP13.49□□□□□ -0.25
SEMA4B-204ENST00000558065 TNNT1P13805 278 aa13.49□□□□□ -0.25
SEMA4B-204ENST00000558065 OTUD6BQ8N6M0 293 aa13.49□□□□□ -0.25
SEMA4B-204ENST00000558065 KIF18AQ8NI77 898 aa13.49□□□□□ -0.25
SEMA4B-204ENST00000558065 PUS7Q96PZ0 661 aaKnown RBP13.49□□□□□ -0.25
SEMA4B-204ENST00000558065 ATG3Q9NT62 314 aa13.48□□□□□ -0.25
SEMA4B-204ENST00000558065 SPTLC3Q9NUV7 552 aa13.48□□□□□ -0.25
SEMA4B-204ENST00000558065 GSCP56915 257 aaPredicted RBP13.48□□□□□ -0.25
SEMA4B-204ENST00000558065 SRPK2P78362 688 aaKnown RBP13.48□□□□□ -0.25
SEMA4B-204ENST00000558065 TOP2AP11388 1531 aaKnown RBP13.48□□□□□ -0.25
SEMA4B-204ENST00000558065 RAPGEF2Q9Y4G8 1499 aa13.47□□□□□ -0.25
SEMA4B-204ENST00000558065 TRIM66O15016 1216 aa13.47□□□□□ -0.25
SEMA4B-204ENST00000558065 ANAPC15P60006 121 aa13.47□□□□□ -0.25
SEMA4B-204ENST00000558065 TMEM132AQ24JP5 1023 aa13.47□□□□□ -0.25
SEMA4B-204ENST00000558065 KRT222Q8N1A0 295 aa13.47□□□□□ -0.25
SEMA4B-204ENST00000558065 CCDC144AA2RUR9 1427 aa13.47□□□□□ -0.25
SEMA4B-204ENST00000558065 FAM212AQ96EL1 285 aa13.47□□□□□ -0.25
SEMA4B-204ENST00000558065 ZBTB12Q9Y330 459 aaPredicted RBP13.46□□□□□ -0.25
SEMA4B-204ENST00000558065 SART3Q15020 963 aaKnown RBP13.46□□□□□ -0.26
SEMA4B-204ENST00000558065 ZKSCAN8Q15776 578 aaPredicted RBP13.46□□□□□ -0.26
SEMA4B-204ENST00000558065 ZSCAN23Q3MJ62 389 aa13.46□□□□□ -0.26
SEMA4B-204ENST00000558065 JRKLQ9Y4A0 524 aa13.46□□□□□ -0.26
SEMA4B-204ENST00000558065 PRIM1P49642 420 aaKnown RBP13.45□□□□□ -0.26
SEMA4B-204ENST00000558065 NOL10Q9BSC4 688 aaKnown RBP13.45□□□□□ -0.26
SEMA4B-204ENST00000558065 REC8O95072 547 aa13.45□□□□□ -0.26
SEMA4B-204ENST00000558065 NBPF6Q5VWK0 638 aa13.45□□□□□ -0.26
SEMA4B-204ENST00000558065 NBPF5PQ86XG9 351 aaPredicted RBP13.45□□□□□ -0.26
SEMA4B-204ENST00000558065 NBPF4Q96M43 638 aa13.45□□□□□ -0.26
SEMA4B-204ENST00000558065 BSDC1Q9NW68 430 aaPredicted RBP13.45□□□□□ -0.26
SEMA4B-204ENST00000558065 TERF2IPQ9NYB0 399 aa13.45□□□□□ -0.26
SEMA4B-204ENST00000558065 MYO1CO00159 1063 aa13.45□□□□□ -0.26
SEMA4B-204ENST00000558065 DRC1Q96MC2 740 aa13.45□□□□□ -0.26
SEMA4B-204ENST00000558065 MUM1L1Q5H9M0 696 aa13.44□□□□□ -0.26
SEMA4B-204ENST00000558065 C17orf53Q8N3J3 647 aaPredicted RBP13.44□□□□□ -0.26
SEMA4B-204ENST00000558065 SYCP1Q15431 976 aa13.44□□□□□ -0.26
SEMA4B-204ENST00000558065 LCMT1Q9UIC8 334 aa13.44□□□□□ -0.26
SEMA4B-204ENST00000558065 SMARCA4P51532 1647 aa13.44□□□□□ -0.26
SEMA4B-204ENST00000558065 C11orf91Q3C1V1 193 aa13.44□□□□□ -0.26
SEMA4B-204ENST00000558065 C10orf67Q8IYJ2 551 aa13.44□□□□□ -0.26
SEMA4B-204ENST00000558065 ST7Q9NRC1 585 aa13.44□□□□□ -0.26
SEMA4B-204ENST00000558065 SYT10Q6XYQ8 523 aa13.43□□□□□ -0.26
SEMA4B-204ENST00000558065 CIZ1Q9ULV3 898 aaPredicted RBP13.43□□□□□ -0.26
SEMA4B-204ENST00000558065 ROCK2O75116 1388 aaKnown RBP13.43□□□□□ -0.26
SEMA4B-204ENST00000558065 ATP2B1P20020 1258 aa13.43□□□□□ -0.26
SEMA4B-204ENST00000558065 PPP1R12AO14974 1030 aaPredicted RBP13.43□□□□□ -0.26
SEMA4B-204ENST00000558065 MNS1Q8NEH6 495 aa13.43□□□□□ -0.26
SEMA4B-204ENST00000558065 DDX49Q9Y6V7 483 aaKnown RBP13.43□□□□□ -0.26
SEMA4B-204ENST00000558065 MAPK8IP3Q9UPT6 1336 aa13.42□□□□□ -0.26
SEMA4B-204ENST00000558065 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.42□□□□□ -0.26
SEMA4B-204ENST00000558065 INHBEP58166 350 aa13.42□□□□□ -0.26
SEMA4B-204ENST00000558065 ZC3H12AQ5D1E8 599 aaKnown RBP13.42□□□□□ -0.26
SEMA4B-204ENST00000558065 CLEC17AQ6ZS10 378 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms