RNA–Protein interactions for RNA: ENST00000558026.1

IGKV2D-28-202, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

BASIC

Gene IGKV2D-28, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-202ENST00000558026 SLIT2O94813 1529 aa15.44■□□□□ 0.06
IGKV2D-28-202ENST00000558026 METP08581 1390 aa15.44■□□□□ 0.06
IGKV2D-28-202ENST00000558026 RPRD2Q5VT52 1461 aaKnown RBP15.43■□□□□ 0.06
IGKV2D-28-202ENST00000558026 CAMTA1Q9Y6Y1 1673 aa15.43■□□□□ 0.06
IGKV2D-28-202ENST00000558026 XPCQ01831 940 aaPredicted RBP15.42■□□□□ 0.06
IGKV2D-28-202ENST00000558026 C1QTNF8P60827 252 aa15.4■□□□□ 0.06
IGKV2D-28-202ENST00000558026 RGPD1P0DJD0 1748 aa15.4■□□□□ 0.06
IGKV2D-28-202ENST00000558026 EZH2Q15910 746 aaKnown RBP15.39■□□□□ 0.05
IGKV2D-28-202ENST00000558026 FAM182BQ5T319 152 aa15.39■□□□□ 0.05
IGKV2D-28-202ENST00000558026 CCDC9Q9Y3X0 531 aaKnown RBP15.39■□□□□ 0.05
IGKV2D-28-202ENST00000558026 PXDNQ92626 1479 aa15.39■□□□□ 0.05
IGKV2D-28-202ENST00000558026 A0A0G2JS52 829 aa15.38■□□□□ 0.05
IGKV2D-28-202ENST00000558026 ONECUT3O60422 494 aaPredicted RBP15.38■□□□□ 0.05
IGKV2D-28-202ENST00000558026 MYT1Q01538 1121 aa15.38■□□□□ 0.05
IGKV2D-28-202ENST00000558026 CHIC2Q9UKJ5 165 aa15.38■□□□□ 0.05
IGKV2D-28-202ENST00000558026 DCAF8L1A6NGE4 600 aa15.37■□□□□ 0.05
IGKV2D-28-202ENST00000558026 VPS72Q15906 364 aa15.37■□□□□ 0.05
IGKV2D-28-202ENST00000558026 TNS1Q9HBL0 1735 aaKnown RBP15.37■□□□□ 0.05
IGKV2D-28-202ENST00000558026 PPP1R1BQ9UD71 204 aaPredicted RBP15.36■□□□□ 0.05
IGKV2D-28-202ENST00000558026 PTPN23Q9H3S7 1636 aa15.35■□□□□ 0.05
IGKV2D-28-202ENST00000558026 DAPK1P53355 1430 aa15.35■□□□□ 0.05
IGKV2D-28-202ENST00000558026 USP32Q8NFA0 1604 aa15.35■□□□□ 0.05
IGKV2D-28-202ENST00000558026 FOXO3O43524 673 aa15.34■□□□□ 0.05
IGKV2D-28-202ENST00000558026 NPHP3Q7Z494 1330 aa15.34■□□□□ 0.05
IGKV2D-28-202ENST00000558026 PLCH1Q4KWH8 1693 aa15.34■□□□□ 0.05
IGKV2D-28-202ENST00000558026 DISP2A7MBM2 1401 aa15.34■□□□□ 0.05
IGKV2D-28-202ENST00000558026 ESCO1Q5FWF5 840 aa15.32■□□□□ 0.04
IGKV2D-28-202ENST00000558026 ANKRD30AQ9BXX3 1397 aa15.32■□□□□ 0.04
IGKV2D-28-202ENST00000558026 NINLQ9Y2I6 1382 aa15.32■□□□□ 0.04
IGKV2D-28-202ENST00000558026 E9PCH4 1651 aa15.32■□□□□ 0.04
IGKV2D-28-202ENST00000558026 FAM98CQ17RN3 349 aaKnown RBP15.31■□□□□ 0.04
IGKV2D-28-202ENST00000558026 KANK4Q5T7N3 995 aaPredicted RBP15.31■□□□□ 0.04
IGKV2D-28-202ENST00000558026 CAMKK2Q96RR4 588 aa15.31■□□□□ 0.04
IGKV2D-28-202ENST00000558026 ADGRL2O95490 1459 aa15.31■□□□□ 0.04
IGKV2D-28-202ENST00000558026 CEP350Q5VT06 3117 aa15.31■□□□□ 0.04
IGKV2D-28-202ENST00000558026 PLEKHG5O94827 1062 aa15.3■□□□□ 0.04
IGKV2D-28-202ENST00000558026 ROBO2Q9HCK4 1378 aa15.3■□□□□ 0.04
IGKV2D-28-202ENST00000558026 NWD2Q9ULI1 1742 aa15.29■□□□□ 0.04
IGKV2D-28-202ENST00000558026 SPON1Q9HCB6 807 aa15.28■□□□□ 0.04
IGKV2D-28-202ENST00000558026 CABLES1Q8TDN4 633 aa15.27■□□□□ 0.04
IGKV2D-28-202ENST00000558026 IQGAP3Q86VI3 1631 aa15.27■□□□□ 0.03
IGKV2D-28-202ENST00000558026 NUP188Q5SRE5 1749 aa15.26■□□□□ 0.03
IGKV2D-28-202ENST00000558026 KCNQ2O43526 872 aa15.26■□□□□ 0.03
IGKV2D-28-202ENST00000558026 SPATA31A3Q5VYP0 1347 aa15.25■□□□□ 0.03
IGKV2D-28-202ENST00000558026 TRIM37O94972 964 aa15.25■□□□□ 0.03
IGKV2D-28-202ENST00000558026 HAP1P54257 671 aaPredicted RBP15.25■□□□□ 0.03
IGKV2D-28-202ENST00000558026 RREB1Q92766 1687 aa15.25■□□□□ 0.03
IGKV2D-28-202ENST00000558026 ADGRB2O60241 1585 aa15.24■□□□□ 0.03
IGKV2D-28-202ENST00000558026 NUTM2FA1L443 756 aa15.24■□□□□ 0.03
IGKV2D-28-202ENST00000558026 UTRNP46939 3433 aa15.24■□□□□ 0.03
IGKV2D-28-202ENST00000558026 CHD4Q14839 1912 aa15.23■□□□□ 0.03
IGKV2D-28-202ENST00000558026 ZNF326Q5BKZ1 582 aaKnown RBP15.23■□□□□ 0.03
IGKV2D-28-202ENST00000558026 APBA3O96018 575 aa15.22■□□□□ 0.03
IGKV2D-28-202ENST00000558026 ANKRD50Q9ULJ7 1429 aa15.22■□□□□ 0.03
IGKV2D-28-202ENST00000558026 NRAPQ86VF7 1730 aa15.22■□□□□ 0.03
IGKV2D-28-202ENST00000558026 FAM83GA6ND36 823 aa15.21■□□□□ 0.03
IGKV2D-28-202ENST00000558026 ABCA3Q99758 1704 aa15.2■□□□□ 0.02
IGKV2D-28-202ENST00000558026 LRPPRCP42704 1394 aaKnown RBP15.2■□□□□ 0.02
IGKV2D-28-202ENST00000558026 CDC42BPGQ6DT37 1551 aa15.19■□□□□ 0.02
IGKV2D-28-202ENST00000558026 NRKQ7Z2Y5 1582 aa15.19■□□□□ 0.02
IGKV2D-28-202ENST00000558026 NBPF8Q3BBV2 869 aa15.19■□□□□ 0.02
IGKV2D-28-202ENST00000558026 NBPF14Q5TI25 921 aa15.19■□□□□ 0.02
IGKV2D-28-202ENST00000558026 PARD3Q8TEW0 1356 aa15.19■□□□□ 0.02
IGKV2D-28-202ENST00000558026 THSD7AQ9UPZ6 1657 aa15.19■□□□□ 0.02
IGKV2D-28-202ENST00000558026 NEXMIFQ5QGS0 1516 aa15.17■□□□□ 0.02
IGKV2D-28-202ENST00000558026 KRT28Q7Z3Y7 464 aa15.17■□□□□ 0.02
IGKV2D-28-202ENST00000558026 MYOM1P52179 1685 aa15.16■□□□□ 0.02
IGKV2D-28-202ENST00000558026 GIGYF1O75420 1035 aaPredicted RBP15.16■□□□□ 0.02
IGKV2D-28-202ENST00000558026 HFM1A2PYH4 1435 aa15.16■□□□□ 0.02
IGKV2D-28-202ENST00000558026 BTG4Q9NY30 223 aa15.15■□□□□ 0.02
IGKV2D-28-202ENST00000558026 FAM196AQ6ZSG2 479 aa15.14■□□□□ 0.01
IGKV2D-28-202ENST00000558026 CCDC144AA2RUR9 1427 aa15.14■□□□□ 0.01
IGKV2D-28-202ENST00000558026 NAIPQ13075 1403 aa15.14■□□□□ 0.01
IGKV2D-28-202ENST00000558026 TNS3Q68CZ2 1445 aa15.14■□□□□ 0.01
IGKV2D-28-202ENST00000558026 LMOD2Q6P5Q4 547 aa15.13■□□□□ 0.01
IGKV2D-28-202ENST00000558026 PRAG1Q86YV5 1406 aa15.13■□□□□ 0.01
IGKV2D-28-202ENST00000558026 PDGFDQ9GZP0 370 aaPredicted RBP15.13■□□□□ 0.01
IGKV2D-28-202ENST00000558026 SPATA31A5Q5VU36 1347 aa15.13■□□□□ 0.01
IGKV2D-28-202ENST00000558026 SPATA31A7Q8IWB4 1347 aa15.13■□□□□ 0.01
IGKV2D-28-202ENST00000558026 CASZ1Q86V15 1759 aa15.11■□□□□ 0.01
IGKV2D-28-202ENST00000558026 KIF1AQ12756 1690 aa15.11■□□□□ 0.01
IGKV2D-28-202ENST00000558026 ZBTB7AO95365 584 aa15.1■□□□□ 0.01
IGKV2D-28-202ENST00000558026 PTGER2P43116 358 aa15.09■□□□□ 0.01
IGKV2D-28-202ENST00000558026 SYT17Q9BSW7 474 aa15.09■□□□□ 0.01
IGKV2D-28-202ENST00000558026 FHDC1Q9C0D6 1143 aaPredicted RBP15.09■□□□□ 0.01
IGKV2D-28-202ENST00000558026 VPS8Q8N3P4 1428 aa15.09■□□□□ 0.01
IGKV2D-28-202ENST00000558026 RGPD8O14715 1765 aaPredicted RBP15.08■□□□□ 0.01
IGKV2D-28-202ENST00000558026 ANO8Q9HCE9 1232 aaPredicted RBP15.08■□□□□ 0
IGKV2D-28-202ENST00000558026 FMN2Q9NZ56 1722 aa15.08■□□□□ 0
IGKV2D-28-202ENST00000558026 COL14A1Q05707 1796 aaKnown RBP15.08■□□□□ 0
IGKV2D-28-202ENST00000558026 WAPLQ7Z5K2 1190 aa15.07■□□□□ 0
IGKV2D-28-202ENST00000558026 ATF5Q9Y2D1 282 aaPredicted RBP15.07■□□□□ 0
IGKV2D-28-202ENST00000558026 CLTCL1P53675 1640 aa15.06■□□□□ 0
IGKV2D-28-202ENST00000558026 NUP155O75694 1391 aa15.05■□□□□ -0
IGKV2D-28-202ENST00000558026 ARHGEF10O15013 1369 aa15.04■□□□□ -0
IGKV2D-28-202ENST00000558026 PSME1Q06323 249 aa15.04■□□□□ -0
IGKV2D-28-202ENST00000558026 SBNO1A3KN83 1393 aa15.03■□□□□ -0
IGKV2D-28-202ENST00000558026 PLEKHH1Q9ULM0 1364 aa15.03■□□□□ -0
IGKV2D-28-202ENST00000558026 SPATA31A1Q5TZJ5 1347 aa15.03■□□□□ -0
IGKV2D-28-202ENST00000558026 SHANK3Q9BYB0 1731 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms