RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 C8orf37Q96NL8 207 aa20.08■□□□□ 0.81
SNRPA1-204ENST00000558020 LRPPRCP42704 1394 aaKnown RBP20.08■□□□□ 0.8
SNRPA1-204ENST00000558020 NGLY1Q96IV0 654 aa20.07■□□□□ 0.8
SNRPA1-204ENST00000558020 NPHP3Q7Z494 1330 aa20.06■□□□□ 0.8
SNRPA1-204ENST00000558020 WAPLQ7Z5K2 1190 aa20.06■□□□□ 0.8
SNRPA1-204ENST00000558020 TECPR2O15040 1411 aa20.05■□□□□ 0.8
SNRPA1-204ENST00000558020 SIRT1Q96EB6 747 aa20.05■□□□□ 0.8
SNRPA1-204ENST00000558020 PIK3C2GO75747 1445 aa20.04■□□□□ 0.8
SNRPA1-204ENST00000558020 ADAMTS2O95450 1211 aa20.04■□□□□ 0.8
SNRPA1-204ENST00000558020 C14orf93Q9H972 538 aaKnown RBP20.04■□□□□ 0.8
SNRPA1-204ENST00000558020 QTRT2Q9H974 415 aaKnown RBP20.04■□□□□ 0.8
SNRPA1-204ENST00000558020 LAMC1P11047 1609 aa20.03■□□□□ 0.8
SNRPA1-204ENST00000558020 RAB3GAP2Q9H2M9 1393 aa20.03■□□□□ 0.8
SNRPA1-204ENST00000558020 IFT172Q9UG01 1749 aa20.02■□□□□ 0.8
SNRPA1-204ENST00000558020 DHX57Q6P158 1386 aaKnown RBP20.02■□□□□ 0.8
SNRPA1-204ENST00000558020 CDC42BPGQ6DT37 1551 aa20.02■□□□□ 0.8
SNRPA1-204ENST00000558020 FOXO3O43524 673 aa20.01■□□□□ 0.79
SNRPA1-204ENST00000558020 RBM6P78332 1123 aaKnown RBP20.01■□□□□ 0.79
SNRPA1-204ENST00000558020 YTHDC2Q9H6S0 1430 aaKnown RBP20.01■□□□□ 0.79
SNRPA1-204ENST00000558020 CDK12Q9NYV4 1490 aaPredicted RBP19.99■□□□□ 0.79
SNRPA1-204ENST00000558020 NUTM2FA1L443 756 aa19.99■□□□□ 0.79
SNRPA1-204ENST00000558020 HRCP23327 699 aa19.98■□□□□ 0.79
SNRPA1-204ENST00000558020 CFAP70Q5T0N1 1121 aa19.98■□□□□ 0.79
SNRPA1-204ENST00000558020 STAC3Q96MF2 364 aa19.97■□□□□ 0.79
SNRPA1-204ENST00000558020 USP21Q9UK80 565 aa19.97■□□□□ 0.79
SNRPA1-204ENST00000558020 UPF1Q92900 1129 aaKnown RBP eCLIP19.96■□□□□ 0.79
SNRPA1-204ENST00000558020 MYOM2P54296 1465 aa19.96■□□□□ 0.79
SNRPA1-204ENST00000558020 KNDC1Q76NI1 1749 aa19.96■□□□□ 0.79
SNRPA1-204ENST00000558020 PLEKHH1Q9ULM0 1364 aa19.95■□□□□ 0.79
SNRPA1-204ENST00000558020 POGKQ9P215 609 aa19.95■□□□□ 0.78
SNRPA1-204ENST00000558020 NRXN1Q9ULB1 1477 aa19.94■□□□□ 0.78
SNRPA1-204ENST00000558020 XPCQ01831 940 aaPredicted RBP19.94■□□□□ 0.78
SNRPA1-204ENST00000558020 FNBP4Q8N3X1 1017 aaPredicted RBP19.94■□□□□ 0.78
SNRPA1-204ENST00000558020 TRPC5Q9UL62 973 aaPredicted RBP19.94■□□□□ 0.78
SNRPA1-204ENST00000558020 PSME1Q06323 249 aa19.93■□□□□ 0.78
SNRPA1-204ENST00000558020 PRAM1Q96QH2 718 aa19.93■□□□□ 0.78
SNRPA1-204ENST00000558020 PXDNQ92626 1479 aa19.92■□□□□ 0.78
SNRPA1-204ENST00000558020 KRT28Q7Z3Y7 464 aa19.91■□□□□ 0.78
SNRPA1-204ENST00000558020 DCAF11Q8TEB1 546 aa19.91■□□□□ 0.78
SNRPA1-204ENST00000558020 KDM2AQ9Y2K7 1162 aa19.91■□□□□ 0.78
SNRPA1-204ENST00000558020 COL22A1Q8NFW1 1626 aaPredicted RBP19.91■□□□□ 0.78
SNRPA1-204ENST00000558020 SAFB2Q14151 953 aaKnown RBP eCLIP19.9■□□□□ 0.78
SNRPA1-204ENST00000558020 PHF8Q9UPP1 1060 aa19.9■□□□□ 0.78
SNRPA1-204ENST00000558020 FMN2Q9NZ56 1722 aa19.88■□□□□ 0.77
SNRPA1-204ENST00000558020 SPATA31A3Q5VYP0 1347 aa19.88■□□□□ 0.77
SNRPA1-204ENST00000558020 HAP1P54257 671 aaPredicted RBP19.87■□□□□ 0.77
SNRPA1-204ENST00000558020 KIF1AQ12756 1690 aa19.87■□□□□ 0.77
SNRPA1-204ENST00000558020 TRAK1Q9UPV9 953 aa19.86■□□□□ 0.77
SNRPA1-204ENST00000558020 RGS12O14924 1447 aa19.85■□□□□ 0.77
SNRPA1-204ENST00000558020 DLC1Q96QB1 1528 aa19.84■□□□□ 0.77
SNRPA1-204ENST00000558020 LMOD2Q6P5Q4 547 aa19.83■□□□□ 0.77
SNRPA1-204ENST00000558020 EIF3AQ14152 1382 aaKnown RBP19.83■□□□□ 0.76
SNRPA1-204ENST00000558020 ATRNO75882 1429 aa19.82■□□□□ 0.76
SNRPA1-204ENST00000558020 ATAD2Q6PL18 1390 aa19.82■□□□□ 0.76
SNRPA1-204ENST00000558020 GJD4Q96KN9 370 aaPredicted RBP19.81■□□□□ 0.76
SNRPA1-204ENST00000558020 ANKARQ7Z5J8 1434 aa19.81■□□□□ 0.76
SNRPA1-204ENST00000558020 SBNO1A3KN83 1393 aa19.81■□□□□ 0.76
SNRPA1-204ENST00000558020 BCL9LQ86UU0 1499 aa19.8■□□□□ 0.76
SNRPA1-204ENST00000558020 UNC5CLQ8IV45 518 aa19.8■□□□□ 0.76
SNRPA1-204ENST00000558020 ARHGEF10O15013 1369 aa19.8■□□□□ 0.76
SNRPA1-204ENST00000558020 MINK1Q8N4C8 1332 aaPredicted RBP19.79■□□□□ 0.76
SNRPA1-204ENST00000558020 PMFBP1Q8TBY8 1022 aa19.79■□□□□ 0.76
SNRPA1-204ENST00000558020 HIRIP3Q9BW71 556 aaPredicted RBP19.79■□□□□ 0.76
SNRPA1-204ENST00000558020 RGPD8O14715 1765 aaPredicted RBP19.79■□□□□ 0.76
SNRPA1-204ENST00000558020 MARF1Q9Y4F3 1742 aaKnown RBP19.79■□□□□ 0.76
SNRPA1-204ENST00000558020 ADGRB1O14514 1584 aa19.78■□□□□ 0.76
SNRPA1-204ENST00000558020 TNS3Q68CZ2 1445 aa19.78■□□□□ 0.76
SNRPA1-204ENST00000558020 GPRASP1Q5JY77 1395 aa19.78■□□□□ 0.76
SNRPA1-204ENST00000558020 WASLO00401 505 aaPredicted RBP19.77■□□□□ 0.76
SNRPA1-204ENST00000558020 PLEKHG5O94827 1062 aa19.75■□□□□ 0.75
SNRPA1-204ENST00000558020 CCDC125Q86Z20 511 aa19.75■□□□□ 0.75
SNRPA1-204ENST00000558020 NGDNQ8NEJ9 315 aaKnown RBP19.75■□□□□ 0.75
SNRPA1-204ENST00000558020 CABLES1Q8TDN4 633 aa19.75■□□□□ 0.75
SNRPA1-204ENST00000558020 ADGRB2O60241 1585 aa19.74■□□□□ 0.75
SNRPA1-204ENST00000558020 SLIT2O94813 1529 aa19.72■□□□□ 0.75
SNRPA1-204ENST00000558020 CCDC9Q9Y3X0 531 aaKnown RBP19.71■□□□□ 0.75
SNRPA1-204ENST00000558020 USP32Q8NFA0 1604 aa19.7■□□□□ 0.74
SNRPA1-204ENST00000558020 PAK3O75914 559 aaPredicted RBP19.7■□□□□ 0.74
SNRPA1-204ENST00000558020 VPS72Q15906 364 aa19.7■□□□□ 0.74
SNRPA1-204ENST00000558020 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.7■□□□□ 0.74
SNRPA1-204ENST00000558020 TULP4Q9NRJ4 1543 aa19.7■□□□□ 0.74
SNRPA1-204ENST00000558020 NUDT16Q96DE0 195 aaKnown RBP19.69■□□□□ 0.74
SNRPA1-204ENST00000558020 PRR36Q9H6K5 1346 aa19.69■□□□□ 0.74
SNRPA1-204ENST00000558020 FAM83GA6ND36 823 aa19.68■□□□□ 0.74
SNRPA1-204ENST00000558020 RALGAPBQ86X10 1494 aa19.67■□□□□ 0.74
SNRPA1-204ENST00000558020 CDK19Q9BWU1 502 aa19.67■□□□□ 0.74
SNRPA1-204ENST00000558020 SEPT12Q8IYM1 358 aa19.65■□□□□ 0.74
SNRPA1-204ENST00000558020 ONECUT3O60422 494 aaPredicted RBP19.64■□□□□ 0.73
SNRPA1-204ENST00000558020 CCDC61Q9Y6R9 512 aa19.64■□□□□ 0.73
SNRPA1-204ENST00000558020 NWD2Q9ULI1 1742 aa19.63■□□□□ 0.73
SNRPA1-204ENST00000558020 BTG4Q9NY30 223 aa19.63■□□□□ 0.73
SNRPA1-204ENST00000558020 ZRANB1Q9UGI0 708 aa19.63■□□□□ 0.73
SNRPA1-204ENST00000558020 SF3B2Q13435 895 aaKnown RBP19.62■□□□□ 0.73
SNRPA1-204ENST00000558020 EP400Q96L91 3159 aa19.62■□□□□ 0.73
SNRPA1-204ENST00000558020 ARHGEF28Q8N1W1 1705 aaKnown RBP19.62■□□□□ 0.73
SNRPA1-204ENST00000558020 KIAA1210Q9ULL0 1709 aa19.62■□□□□ 0.73
SNRPA1-204ENST00000558020 A0A0G2JS52 829 aa19.61■□□□□ 0.73
SNRPA1-204ENST00000558020 MYT1Q01538 1121 aa19.61■□□□□ 0.73
SNRPA1-204ENST00000558020 NBPF1Q3BBV0 1214 aa19.61■□□□□ 0.73
SNRPA1-204ENST00000558020 TRPM3Q9HCF6 1732 aaPredicted RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms